Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02438

Experiment: PYE with sodium fluoride 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with sodium fluoride 30 mM
2,577,839	-				+1.0
2,577,853	-				-0.9
2,577,876	+				-1.3
2,577,878	-				-1.3
2,577,884	-				-0.0
2,577,890	-				+0.1
2,577,946	-		CCNA_02437	0.15	+1.5
2,577,984	-		CCNA_02437	0.19	-1.0
2,577,989	+		CCNA_02437	0.20	-1.8
2,577,989	-		CCNA_02437	0.20	+0.1
2,577,991	+		CCNA_02437	0.20	-0.4
2,577,994	-		CCNA_02437	0.20	-1.6
2,577,999	-		CCNA_02437	0.21	+0.6
2,577,999	-		CCNA_02437	0.21	-0.7
2,577,999	-				+1.3
2,578,008	-		CCNA_02437	0.22	-0.1
2,578,027	+		CCNA_02437	0.24	-2.0
2,578,099	-		CCNA_02437	0.32	+1.2
2,578,105	+		CCNA_02437	0.32	-1.3
2,578,113	-		CCNA_02437	0.33	+0.6
2,578,113	-		CCNA_02437	0.33	+0.7
2,578,155	+		CCNA_02437	0.38	-0.4
2,578,163	+		CCNA_02437	0.39	-2.1
2,578,163	-		CCNA_02437	0.39	-0.1
2,578,191	+		CCNA_02437	0.42	+0.7
2,578,199	-		CCNA_02437	0.43	+0.2
2,578,215	-		CCNA_02437	0.44	-0.5
2,578,215	-		CCNA_02437	0.44	+0.1
2,578,221	-		CCNA_02437	0.45	+0.8
2,578,244	+		CCNA_02437	0.48	-1.1
2,578,250	+		CCNA_02437	0.48	-1.6
2,578,252	-		CCNA_02437	0.49	-0.8
2,578,255	+		CCNA_02437	0.49	-1.1
2,578,273	-		CCNA_02437	0.51	-0.3
2,578,336	+		CCNA_02437	0.58	-0.7
2,578,336	+		CCNA_02437	0.58	+0.9
2,578,341	+		CCNA_02437	0.58	+1.3
2,578,344	-		CCNA_02437	0.59	+1.1
2,578,349	-		CCNA_02437	0.59	-0.9
2,578,349	-		CCNA_02437	0.59	+1.5
2,578,360	-		CCNA_02437	0.60	-0.9
2,578,362	+		CCNA_02437	0.61	-1.3
2,578,370	-		CCNA_02437	0.61	+2.6
2,578,392	-		CCNA_02437	0.64	-0.5
2,578,402	-		CCNA_02437	0.65	+0.1
2,578,404	+		CCNA_02437	0.65	+1.7
2,578,437	-		CCNA_02437	0.69	+0.5
2,578,444	-		CCNA_02437	0.70	+0.1
2,578,472	-		CCNA_02437	0.73	-0.6
2,578,472	-		CCNA_02437	0.73	+1.1
2,578,472	-		CCNA_02437	0.73	+0.1
2,578,472	-		CCNA_02437	0.73	-1.4
2,578,499	+		CCNA_02437	0.76	-0.6
2,578,507	-		CCNA_02437	0.77	-3.2
2,578,517	-		CCNA_02437	0.78	-0.4
2,578,530	+		CCNA_02437	0.79	-1.0
2,578,530	+		CCNA_02437	0.79	-2.4
2,578,533	-		CCNA_02437	0.79	+1.1
2,578,545	-		CCNA_02437	0.81	+0.9
2,578,545	-		CCNA_02437	0.81	-1.6
2,578,550	+		CCNA_02437	0.81	-2.0
2,578,558	-		CCNA_02437	0.82	+0.6
2,578,577	+		CCNA_02437	0.84	+0.5
2,578,578	-		CCNA_02437	0.84	+0.8
2,578,586	-		CCNA_02437	0.85	-0.2
2,578,608	-		CCNA_02437	0.88	+0.5
2,578,614	+		CCNA_02437	0.88	+1.0
2,578,620	+		CCNA_02437	0.89	-1.0
2,578,623	-		CCNA_02437	0.89	-0.4
2,578,628	-		CCNA_02437	0.90	+0.4
2,578,628	-		CCNA_02437	0.90	+2.3
2,578,628	-		CCNA_02437	0.90	-0.6
2,578,628	-		CCNA_02437	0.90	+1.1
2,578,628	-		CCNA_02437	0.90	+1.6
2,578,850	-				-1.0
2,578,864	+				+0.4
2,578,873	+				+1.5
2,578,880	+				-1.1
2,578,896	+				-2.3
2,578,902	-				-1.6
2,578,904	-				-1.4
2,578,909	-		CCNA_02438	0.10	-1.4
2,578,928	-		CCNA_02438	0.12	-2.0
2,578,970	+		CCNA_02438	0.17	+0.7
2,578,978	-		CCNA_02438	0.17	-0.2
2,579,050	+		CCNA_02438	0.25	-1.9
2,579,055	+		CCNA_02438	0.25	+1.1
2,579,067	+		CCNA_02438	0.26	-0.2
2,579,068	-		CCNA_02438	0.27	+1.4
2,579,133	-		CCNA_02438	0.33	-1.3
2,579,140	-		CCNA_02438	0.34	-0.7
2,579,155	-		CCNA_02438	0.35	-0.7
2,579,170	+		CCNA_02438	0.37	-0.6
2,579,170	+		CCNA_02438	0.37	-0.2
2,579,170	+		CCNA_02438	0.37	-0.2
2,579,170	+		CCNA_02438	0.37	+0.1
2,579,170	+		CCNA_02438	0.37	-2.0
2,579,170	+		CCNA_02438	0.37	-0.6
2,579,178	-		CCNA_02438	0.38	-0.9
2,579,178	-		CCNA_02438	0.38	-1.5
2,579,178	-		CCNA_02438	0.38	-1.6
2,579,178	-		CCNA_02438	0.38	+2.2
2,579,178	-		CCNA_02438	0.38	+1.0
2,579,178	-		CCNA_02438	0.38	-1.2
2,579,178	-		CCNA_02438	0.38	-0.9
2,579,178	-		CCNA_02438	0.38	-2.3
2,579,178	-		CCNA_02438	0.38	-2.0
2,579,178	-		CCNA_02438	0.38	-1.2
2,579,178	-		CCNA_02438	0.38	-0.5
2,579,180	+		CCNA_02438	0.38	+0.2
2,579,183	-		CCNA_02438	0.38	-0.1
2,579,188	-		CCNA_02438	0.39	-1.1
2,579,213	-		CCNA_02438	0.41	-1.0
2,579,226	+		CCNA_02438	0.43	+0.3
2,579,234	-		CCNA_02438	0.44	+0.3
2,579,234	-		CCNA_02438	0.44	-1.2
2,579,274	+		CCNA_02438	0.48	+0.9
2,579,301	+		CCNA_02438	0.50	+0.2
2,579,306	+		CCNA_02438	0.51	+0.7
2,579,309	-		CCNA_02438	0.51	-1.8
2,579,345	+		CCNA_02438	0.55	-1.5
2,579,352	+		CCNA_02438	0.56	-0.4
2,579,352	+		CCNA_02438	0.56	-1.8
2,579,360	-		CCNA_02438	0.57	-2.0
2,579,360	-		CCNA_02438	0.57	-1.8
2,579,360	-		CCNA_02438	0.57	+0.1
2,579,371	+		CCNA_02438	0.58	-0.2
2,579,379	-		CCNA_02438	0.58	-1.6
2,579,390	-		CCNA_02438	0.60	-2.5
2,579,397	-		CCNA_02438	0.60	-0.2
2,579,398	-		CCNA_02438	0.60	-0.3
2,579,406	+		CCNA_02438	0.61	+1.7
2,579,406	+		CCNA_02438	0.61	-0.1
2,579,411	+		CCNA_02438	0.62	-0.7
2,579,411	+		CCNA_02438	0.62	-0.5
2,579,411	+		CCNA_02438	0.62	-1.1
2,579,411	+		CCNA_02438	0.62	-0.3
2,579,411	+		CCNA_02438	0.62	-2.8
2,579,419	-		CCNA_02438	0.63	+0.1
2,579,419	-		CCNA_02438	0.63	-0.5
2,579,419	-		CCNA_02438	0.63	-1.5
2,579,419	-		CCNA_02438	0.63	+0.1
2,579,449	-		CCNA_02438	0.66	-0.6
2,579,460	+		CCNA_02438	0.67	+3.3
2,579,460	+		CCNA_02438	0.67	-0.0
2,579,460	+		CCNA_02438	0.67	-0.1
2,579,460	+		CCNA_02438	0.67	-1.8
2,579,460	+		CCNA_02438	0.67	+2.7
2,579,460	+		CCNA_02438	0.67	-0.4
2,579,462	+		CCNA_02438	0.67	+0.1
2,579,468	-		CCNA_02438	0.68	-0.0
2,579,468	-		CCNA_02438	0.68	-0.4
2,579,470	+		CCNA_02438	0.68	+2.0
2,579,485	+		CCNA_02438	0.69	-0.5
2,579,493	-		CCNA_02438	0.70	-0.4
2,579,548	-		CCNA_02438	0.76	-0.2
2,579,568	+		CCNA_02438	0.78	+1.3
2,579,609	-		CCNA_02438	0.82	-1.7
2,579,622	-		CCNA_02438	0.83	-0.7
2,579,626	+		CCNA_02438	0.84	-1.6
2,579,627	-		CCNA_02438	0.84	-0.4
2,579,634	-		CCNA_02438	0.85	-0.1
2,579,634	-		CCNA_02438	0.85	-0.6
2,579,635	+		CCNA_02438	0.85	-1.1
2,579,641	-		CCNA_02438	0.85	-0.4
2,579,641	-		CCNA_02438	0.85	-0.8
2,579,693	+				+1.1
2,579,693	+				+0.7
2,579,701	-				+1.3
2,579,701	-				-2.4
2,579,713	-				-0.6
2,579,714	-				+0.9
2,579,714	-				+1.2
2,579,722	-				-3.2
2,579,760	+				+0.3
2,579,760	+				+0.6
2,579,760	+				-1.2
2,579,760	+				+1.2
2,579,760	+				-1.1
2,579,760	+				+1.0
2,579,760	+				-0.5
2,579,768	-				+0.6
2,579,768	-				+0.6
2,579,768	-				+2.6
2,579,768	-				-1.7
2,579,878	+				+0.5
2,579,878	+				-0.2
2,579,958	-				+0.1
2,579,960	+				-1.1
2,579,986	+				-2.0
2,580,030	-				+0.4
2,580,040	+		CCNA_02439	0.10	-1.8
2,580,040	+		CCNA_02439	0.10	-2.9
2,580,048	-				+3.3
2,580,118	-		CCNA_02439	0.16	+1.4
2,580,134	+		CCNA_02439	0.18	+1.4
2,580,134	+		CCNA_02439	0.18	+1.2
2,580,142	-		CCNA_02439	0.18	-0.9
2,580,142	-		CCNA_02439	0.18	+0.9
2,580,142	-		CCNA_02439	0.18	-0.0
2,580,171	+		CCNA_02439	0.21	+0.1
2,580,173	+		CCNA_02439	0.21	+1.8
2,580,184	-		CCNA_02439	0.22	-0.4
2,580,193	+		CCNA_02439	0.22	-0.1
2,580,213	+		CCNA_02439	0.24	-2.0
2,580,216	-		CCNA_02439	0.24	-1.8
2,580,226	+		CCNA_02439	0.25	-1.0
2,580,233	-		CCNA_02439	0.25	-1.1
2,580,254	+		CCNA_02439	0.27	-1.4
2,580,278	+		CCNA_02439	0.29	-1.6
2,580,283	+		CCNA_02439	0.29	+1.3
2,580,310	+		CCNA_02439	0.31	-1.4
2,580,311	-		CCNA_02439	0.31	+0.3
2,580,383	-		CCNA_02439	0.37	-1.1
2,580,383	-		CCNA_02439	0.37	-0.5
2,580,385	-		CCNA_02439	0.37	-1.5
2,580,385	-		CCNA_02439	0.37	-1.7
2,580,414	+		CCNA_02439	0.39	-0.7
2,580,422	-		CCNA_02439	0.40	+1.2
2,580,432	-		CCNA_02439	0.41	+0.9
2,580,491	-		CCNA_02439	0.45	-0.4
2,580,511	-		CCNA_02439	0.47	-0.1
2,580,545	+		CCNA_02439	0.49	-1.7
2,580,553	-		CCNA_02439	0.50	-1.2
2,580,553	-		CCNA_02439	0.50	-2.0
2,580,553	-		CCNA_02439	0.50	+0.4
2,580,733	+		CCNA_02439	0.64	-1.2