Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08595

Experiment: soil sample 4; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	soil sample 4; outgrowth in LB
1,822,339	+		ABZR87_RS08590	0.61	+0.1
1,822,339	+		ABZR87_RS08590	0.61	-1.2
1,822,339	+		ABZR87_RS08590	0.61	-2.6
1,822,340	-		ABZR87_RS08590	0.61	+0.8
1,822,340	-		ABZR87_RS08590	0.61	+1.4
1,822,340	-		ABZR87_RS08590	0.61	-0.8
1,822,340	-		ABZR87_RS08590	0.61	-0.7
1,822,340	-		ABZR87_RS08590	0.61	-0.9
1,822,340	-		ABZR87_RS08590	0.61	-0.9
1,822,340	-		ABZR87_RS08590	0.61	-1.0
1,822,340	-		ABZR87_RS08590	0.61	-0.9
1,822,515	+		ABZR87_RS08590	0.69	-1.4
1,822,516	-		ABZR87_RS08590	0.69	-0.2
1,822,516	-		ABZR87_RS08590	0.69	-1.5
1,822,516	-		ABZR87_RS08590	0.69	+0.9
1,822,723	-		ABZR87_RS08590	0.78	-0.2
1,823,081	+				-0.4
1,823,478	+				-0.7
1,823,478	+				+1.0
1,823,479	-				-1.7
1,823,526	-				-0.8
1,823,553	+				+0.0
1,823,553	+				-1.5
1,823,554	-				+0.0
1,823,610	+				+0.8
1,823,610	+				-0.9
1,823,610	+				-0.6
1,823,611	-				+0.1
1,823,611	-				-1.6
1,823,718	+				-1.3
1,823,718	+				+0.2
1,823,718	+				-1.1
1,823,719	-				+0.4
1,823,719	-				-1.8
1,823,775	+				-1.3
1,823,775	+				-2.3
1,823,997	+		ABZR87_RS08595	0.12	+0.3
1,823,997	+		ABZR87_RS08595	0.12	+0.1
1,824,130	+		ABZR87_RS08595	0.14	-0.3
1,824,189	+		ABZR87_RS08595	0.15	-1.1
1,824,189	+		ABZR87_RS08595	0.15	-0.6
1,824,189	+		ABZR87_RS08595	0.15	-1.1
1,824,190	-		ABZR87_RS08595	0.15	-1.3
1,824,211	+		ABZR87_RS08595	0.15	-1.1
1,824,212	-		ABZR87_RS08595	0.15	-1.1
1,824,212	-		ABZR87_RS08595	0.15	-0.3
1,824,240	+		ABZR87_RS08595	0.16	-0.8
1,824,240	+		ABZR87_RS08595	0.16	+0.1
1,824,241	-		ABZR87_RS08595	0.16	-0.9
1,824,241	-		ABZR87_RS08595	0.16	+0.1
1,824,261	+		ABZR87_RS08595	0.16	-1.0
1,824,262	-		ABZR87_RS08595	0.16	-0.8
1,824,262	-		ABZR87_RS08595	0.16	-0.7
1,824,385	-		ABZR87_RS08595	0.18	-1.0
1,824,385	-		ABZR87_RS08595	0.18	+0.1
1,824,387	+		ABZR87_RS08595	0.18	+0.2
1,824,387	+		ABZR87_RS08595	0.18	+0.4
1,824,388	-		ABZR87_RS08595	0.18	-1.1
1,824,388	-		ABZR87_RS08595	0.18	-0.0
1,824,388	-		ABZR87_RS08595	0.18	+0.6
1,824,388	-		ABZR87_RS08595	0.18	-1.0
1,824,388	-		ABZR87_RS08595	0.18	+0.2
1,824,388	-		ABZR87_RS08595	0.18	-0.3
1,824,388	-		ABZR87_RS08595	0.18	-0.9
1,824,942	+		ABZR87_RS08595	0.27	-0.1
1,824,942	+		ABZR87_RS08595	0.27	-0.7
1,824,943	-		ABZR87_RS08595	0.27	-1.5
1,825,032	+		ABZR87_RS08595	0.29	-0.1
1,825,356	-		ABZR87_RS08595	0.34	-1.3
1,825,767	+		ABZR87_RS08595	0.41	-0.1
1,825,767	+		ABZR87_RS08595	0.41	-0.4
1,825,767	+		ABZR87_RS08595	0.41	-1.9
1,826,043	+		ABZR87_RS08595	0.45	+0.1
1,826,044	-		ABZR87_RS08595	0.45	-0.4
1,826,451	+		ABZR87_RS08595	0.52	-1.0
1,826,452	-		ABZR87_RS08595	0.52	-1.4
1,826,452	-		ABZR87_RS08595	0.52	-0.9
1,826,452	-		ABZR87_RS08595	0.52	-0.7
1,826,452	-		ABZR87_RS08595	0.52	-0.8
1,826,460	+		ABZR87_RS08595	0.52	-1.2
1,826,460	+		ABZR87_RS08595	0.52	+0.7
1,826,461	-		ABZR87_RS08595	0.52	-1.1
1,826,590	+		ABZR87_RS08595	0.54	-1.4
1,826,853	-		ABZR87_RS08595	0.59	-2.3
1,827,270	+		ABZR87_RS08595	0.65	-0.5
1,827,270	+		ABZR87_RS08595	0.65	-1.1
1,827,270	+		ABZR87_RS08595	0.65	+0.4
1,827,270	+		ABZR87_RS08595	0.65	-1.8
1,827,271	-		ABZR87_RS08595	0.65	-1.1
1,827,271	-		ABZR87_RS08595	0.65	+0.3
1,827,271	-		ABZR87_RS08595	0.65	-0.2
1,827,606	+		ABZR87_RS08595	0.71	+0.2
1,827,606	+		ABZR87_RS08595	0.71	-1.6
1,827,606	+		ABZR87_RS08595	0.71	-0.4
1,827,606	+		ABZR87_RS08595	0.71	-0.4
1,827,606	+		ABZR87_RS08595	0.71	-0.1
1,827,607	-		ABZR87_RS08595	0.71	-0.9
1,827,607	-		ABZR87_RS08595	0.71	-0.4
1,827,607	-		ABZR87_RS08595	0.71	-0.6
1,827,607	-		ABZR87_RS08595	0.71	-0.1
1,827,607	-		ABZR87_RS08595	0.71	-1.2
1,827,607	-		ABZR87_RS08595	0.71	-1.3
1,827,607	-		ABZR87_RS08595	0.71	-0.6
1,827,607	-		ABZR87_RS08595	0.71	-1.9
1,827,945	+		ABZR87_RS08595	0.77	-0.3
1,827,946	-		ABZR87_RS08595	0.77	-1.4
1,828,472	+		ABZR87_RS08595	0.85	-1.9
1,828,472	+		ABZR87_RS08595	0.85	+0.3
1,828,473	-		ABZR87_RS08595	0.85	-0.8
1,828,509	+		ABZR87_RS08595	0.86	-0.6
1,828,509	+		ABZR87_RS08595	0.86	-1.1
1,828,509	+		ABZR87_RS08595	0.86	+0.1
1,828,510	-		ABZR87_RS08595	0.86	+1.5
1,828,510	-		ABZR87_RS08595	0.86	-3.2
1,828,510	-		ABZR87_RS08595	0.86	-0.9
1,828,575	+		ABZR87_RS08595	0.87	-0.0
1,828,575	+		ABZR87_RS08595	0.87	-1.9
1,828,576	-		ABZR87_RS08595	0.87	-1.3
1,828,576	-		ABZR87_RS08595	0.87	-0.4
1,828,576	-		ABZR87_RS08595	0.87	-0.6
1,828,576	-		ABZR87_RS08595	0.87	-0.6
1,828,623	+		ABZR87_RS08595	0.88	-0.6
1,828,623	+		ABZR87_RS08595	0.88	-0.4
1,828,623	+		ABZR87_RS08595	0.88	-0.6
1,828,623	+		ABZR87_RS08595	0.88	-1.1
1,828,624	-		ABZR87_RS08595	0.88	-0.9
1,828,674	+		ABZR87_RS08595	0.89	-1.5
1,828,675	-		ABZR87_RS08595	0.89	-1.5
1,828,675	-		ABZR87_RS08595	0.89	-2.1
1,828,842	+				-0.9
1,828,842	+				-2.8
1,828,842	+				-1.2
1,828,842	+				-1.3
1,828,842	+				-1.2
1,828,842	+				+1.1
1,828,843	-				+0.6
1,828,843	-				-0.4
1,828,843	-				-0.0
1,828,843	-				+1.1
1,828,843	-				-1.6
1,829,176	+				-2.1
1,829,176	+				+0.2
1,829,177	-				+1.2
1,829,229	-				-0.8
1,829,285	+				-0.8
1,829,293	-				-0.4
1,829,510	+				-0.6
1,829,564	+				-0.2
1,829,564	+				+0.2
1,829,564	+				+0.6
1,829,599	+		ABZR87_RS08600	0.10	-0.4
1,829,599	+		ABZR87_RS08600	0.10	+0.3
1,829,599	+		ABZR87_RS08600	0.10	+1.9
1,829,599	+		ABZR87_RS08600	0.10	-1.1
1,829,599	+		ABZR87_RS08600	0.10	+0.3
1,829,599	+		ABZR87_RS08600	0.10	+0.8
1,829,599	+		ABZR87_RS08600	0.10	+0.1
1,829,600	-		ABZR87_RS08600	0.10	+0.9
1,829,600	-		ABZR87_RS08600	0.10	+1.0
1,829,600	-		ABZR87_RS08600	0.10	-0.3
1,829,600	-		ABZR87_RS08600	0.10	+0.6
1,829,600	-		ABZR87_RS08600	0.10	+0.2
1,829,633	+		ABZR87_RS08600	0.13	+0.7
1,829,633	+		ABZR87_RS08600	0.13	-0.5
1,829,633	+		ABZR87_RS08600	0.13	+0.0
1,829,633	+		ABZR87_RS08600	0.13	-0.0
1,829,633	+		ABZR87_RS08600	0.13	-0.6
1,829,633	+		ABZR87_RS08600	0.13	+0.5
1,829,633	+		ABZR87_RS08600	0.13	-0.8
1,829,633	+		ABZR87_RS08600	0.13	-0.2
1,829,633	+		ABZR87_RS08600	0.13	+0.1
1,829,633	+		ABZR87_RS08600	0.13	-0.9
1,829,633	+		ABZR87_RS08600	0.13	-0.1
1,829,634	-		ABZR87_RS08600	0.13	-1.1
1,829,634	-		ABZR87_RS08600	0.13	-0.4
1,829,634	-		ABZR87_RS08600	0.13	-0.3
1,829,634	-		ABZR87_RS08600	0.13	-0.2
1,829,634	-		ABZR87_RS08600	0.13	-0.1
1,829,634	-		ABZR87_RS08600	0.13	-1.0
1,829,634	-		ABZR87_RS08600	0.13	+0.5
1,829,634	-		ABZR87_RS08600	0.13	-0.6
1,829,634	-		ABZR87_RS08600	0.13	+0.2
1,829,666	+		ABZR87_RS08600	0.15	+0.6
1,829,666	+		ABZR87_RS08600	0.15	+0.6
1,829,667	-		ABZR87_RS08600	0.15	-0.6
1,829,825	+		ABZR87_RS08600	0.25	-1.6
1,829,826	-		ABZR87_RS08600	0.25	+0.3
1,829,906	+		ABZR87_RS08600	0.30	+0.6
1,829,906	+		ABZR87_RS08600	0.30	+0.4
1,829,906	+		ABZR87_RS08600	0.30	-0.8
1,829,906	+		ABZR87_RS08600	0.30	+1.0
1,829,906	+		ABZR87_RS08600	0.30	+0.4
1,829,906	+		ABZR87_RS08600	0.30	+1.1
1,829,907	-		ABZR87_RS08600	0.30	+1.0
1,829,907	-		ABZR87_RS08600	0.30	-0.6
1,829,907	-		ABZR87_RS08600	0.30	-0.3
1,829,907	-		ABZR87_RS08600	0.30	-0.4
1,830,086	+		ABZR87_RS08600	0.42	-0.2
1,830,086	+		ABZR87_RS08600	0.42	-1.4
1,830,086	+		ABZR87_RS08600	0.42	-0.2
1,830,086	+		ABZR87_RS08600	0.42	+0.5
1,830,086	+		ABZR87_RS08600	0.42	+0.9
1,830,087	-		ABZR87_RS08600	0.42	-0.2
1,830,089	-		ABZR87_RS08600	0.42	+0.4
1,830,215	+		ABZR87_RS08600	0.50	-1.4
1,830,215	+		ABZR87_RS08600	0.50	+0.7
1,830,215	+		ABZR87_RS08600	0.50	-1.2
1,830,215	+		ABZR87_RS08600	0.50	+0.4
1,830,215	+		ABZR87_RS08600	0.50	-1.1
1,830,216	-		ABZR87_RS08600	0.50	-0.5
1,830,216	-		ABZR87_RS08600	0.50	-0.4
1,830,216	-		ABZR87_RS08600	0.50	-2.5
1,830,216	-		ABZR87_RS08600	0.50	+0.1
1,830,216	-		ABZR87_RS08600	0.50	-0.2
1,830,216	-		ABZR87_RS08600	0.50	+0.5
1,830,257	+		ABZR87_RS08600	0.53	-1.0
1,830,257	+		ABZR87_RS08600	0.53	-0.3
1,830,258	-		ABZR87_RS08600	0.53	+0.2