Experiment: soil sample 4; outgrowth in LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS02515 and ABZR87_RS02520 are separated by 59 nucleotides ABZR87_RS02520 and ABZR87_RS02525 overlap by 4 nucleotides ABZR87_RS02525 and ABZR87_RS02530 are separated by 251 nucleotides ABZR87_RS02530 and ABZR87_RS02535 are separated by 74 nucleotides
ABZR87_RS02515: ABZR87_RS02515 - BolA family protein, at 533,289 to 533,525
_RS02515
ABZR87_RS02520: ABZR87_RS02520 - ABC transporter permease, at 533,585 to 534,373
_RS02520
ABZR87_RS02525: ABZR87_RS02525 - ABC transporter ATP-binding protein, at 534,370 to 535,335
_RS02525
ABZR87_RS02530: ABZR87_RS02530 - STAS domain-containing protein, at 535,587 to 535,898
_RS02530
ABZR87_RS02535: ABZR87_RS02535 - phospholipid-binding protein MlaC, at 535,973 to 536,608
_RS02535
Position (kb)
534
535
536 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 533.495 kb on - strand, within ABZR87_RS02515 at 533.495 kb on - strand, within ABZR87_RS02515 at 533.602 kb on - strand at 533.710 kb on - strand, within ABZR87_RS02520 at 533.730 kb on + strand, within ABZR87_RS02520 at 533.731 kb on - strand, within ABZR87_RS02520 at 533.732 kb on + strand, within ABZR87_RS02520 at 533.791 kb on - strand, within ABZR87_RS02520 at 533.791 kb on - strand, within ABZR87_RS02520 at 533.791 kb on - strand, within ABZR87_RS02520 at 533.791 kb on - strand, within ABZR87_RS02520 at 533.791 kb on - strand, within ABZR87_RS02520 at 533.873 kb on - strand, within ABZR87_RS02520 at 533.954 kb on + strand, within ABZR87_RS02520 at 533.954 kb on + strand, within ABZR87_RS02520 at 533.954 kb on + strand, within ABZR87_RS02520 at 533.954 kb on + strand, within ABZR87_RS02520 at 533.954 kb on + strand, within ABZR87_RS02520 at 533.955 kb on - strand, within ABZR87_RS02520 at 533.955 kb on - strand, within ABZR87_RS02520 at 534.031 kb on - strand, within ABZR87_RS02520 at 534.031 kb on - strand, within ABZR87_RS02520 at 534.031 kb on - strand, within ABZR87_RS02520 at 534.031 kb on - strand, within ABZR87_RS02520 at 534.031 kb on - strand, within ABZR87_RS02520 at 534.031 kb on - strand, within ABZR87_RS02520 at 534.184 kb on - strand, within ABZR87_RS02520 at 534.184 kb on - strand, within ABZR87_RS02520 at 534.184 kb on - strand, within ABZR87_RS02520 at 534.184 kb on - strand, within ABZR87_RS02520 at 534.184 kb on - strand, within ABZR87_RS02520 at 534.244 kb on - strand, within ABZR87_RS02520 at 534.316 kb on - strand at 534.316 kb on - strand at 534.316 kb on - strand at 534.316 kb on - strand at 534.765 kb on - strand, within ABZR87_RS02525 at 534.765 kb on - strand, within ABZR87_RS02525 at 534.893 kb on - strand, within ABZR87_RS02525 at 535.029 kb on - strand, within ABZR87_RS02525 at 535.029 kb on - strand, within ABZR87_RS02525 at 535.299 kb on - strand at 535.299 kb on - strand at 535.299 kb on - strand at 535.442 kb on - strand at 535.442 kb on - strand at 535.442 kb on - strand at 535.442 kb on - strand at 535.442 kb on - strand at 535.443 kb on + strand at 535.652 kb on - strand, within ABZR87_RS02530 at 535.960 kb on - strand at 535.974 kb on + strand at 535.975 kb on - strand at 535.975 kb on - strand at 535.975 kb on - strand at 536.079 kb on + strand, within ABZR87_RS02535 at 536.079 kb on + strand, within ABZR87_RS02535 at 536.080 kb on - strand, within ABZR87_RS02535 at 536.118 kb on + strand, within ABZR87_RS02535 at 536.118 kb on + strand, within ABZR87_RS02535 at 536.118 kb on + strand, within ABZR87_RS02535 at 536.118 kb on + strand, within ABZR87_RS02535 at 536.118 kb on + strand, within ABZR87_RS02535 at 536.118 kb on + strand, within ABZR87_RS02535 at 536.119 kb on - strand, within ABZR87_RS02535 at 536.119 kb on - strand, within ABZR87_RS02535 at 536.119 kb on - strand, within ABZR87_RS02535 at 536.119 kb on - strand, within ABZR87_RS02535 at 536.119 kb on - strand, within ABZR87_RS02535 at 536.241 kb on + strand, within ABZR87_RS02535 at 536.241 kb on + strand, within ABZR87_RS02535 at 536.242 kb on - strand, within ABZR87_RS02535 at 536.242 kb on - strand, within ABZR87_RS02535 at 536.283 kb on + strand, within ABZR87_RS02535 at 536.283 kb on - strand, within ABZR87_RS02535 at 536.284 kb on - strand, within ABZR87_RS02535 at 536.284 kb on - strand, within ABZR87_RS02535
Per-strain Table
Position Strand Gene LocusTag Fraction soil sample 4; outgrowth in LB remove 533,495 - ABZR87_RS02515 0.87 +1.0 533,495 - ABZR87_RS02515 0.87 -0.0 533,602 - +0.0 533,710 - ABZR87_RS02520 0.16 +0.0 533,730 + ABZR87_RS02520 0.18 +2.4 533,731 - ABZR87_RS02520 0.19 +1.0 533,732 + ABZR87_RS02520 0.19 +1.4 533,791 - ABZR87_RS02520 0.26 -0.2 533,791 - ABZR87_RS02520 0.26 +0.0 533,791 - ABZR87_RS02520 0.26 -1.1 533,791 - ABZR87_RS02520 0.26 +0.3 533,791 - ABZR87_RS02520 0.26 -0.3 533,873 - ABZR87_RS02520 0.37 -0.6 533,954 + ABZR87_RS02520 0.47 +1.4 533,954 + ABZR87_RS02520 0.47 +0.1 533,954 + ABZR87_RS02520 0.47 +0.1 533,954 + ABZR87_RS02520 0.47 +0.4 533,954 + ABZR87_RS02520 0.47 +0.2 533,955 - ABZR87_RS02520 0.47 -0.3 533,955 - ABZR87_RS02520 0.47 -0.5 534,031 - ABZR87_RS02520 0.57 -0.3 534,031 - ABZR87_RS02520 0.57 +0.1 534,031 - ABZR87_RS02520 0.57 -0.7 534,031 - ABZR87_RS02520 0.57 -0.0 534,031 - ABZR87_RS02520 0.57 -1.3 534,031 - ABZR87_RS02520 0.57 -1.7 534,184 - ABZR87_RS02520 0.76 -2.8 534,184 - ABZR87_RS02520 0.76 +1.4 534,184 - ABZR87_RS02520 0.76 -0.0 534,184 - ABZR87_RS02520 0.76 -0.7 534,184 - ABZR87_RS02520 0.76 -0.4 534,244 - ABZR87_RS02520 0.84 +1.1 534,316 - +0.3 534,316 - -1.0 534,316 - +0.4 534,316 - -0.6 534,765 - ABZR87_RS02525 0.41 -2.1 534,765 - ABZR87_RS02525 0.41 -0.7 534,893 - ABZR87_RS02525 0.54 -1.1 535,029 - ABZR87_RS02525 0.68 -1.6 535,029 - ABZR87_RS02525 0.68 -0.4 535,299 - +0.9 535,299 - +0.9 535,299 - -0.2 535,442 - +0.6 535,442 - -1.2 535,442 - -0.3 535,442 - +0.6 535,442 - +0.4 535,443 + -0.7 535,652 - ABZR87_RS02530 0.21 +0.1 535,960 - -0.5 535,974 + +0.6 535,975 - -2.0 535,975 - -1.6 535,975 - -1.6 536,079 + ABZR87_RS02535 0.17 +0.1 536,079 + ABZR87_RS02535 0.17 -0.1 536,080 - ABZR87_RS02535 0.17 +0.7 536,118 + ABZR87_RS02535 0.23 -1.5 536,118 + ABZR87_RS02535 0.23 +0.9 536,118 + ABZR87_RS02535 0.23 +2.4 536,118 + ABZR87_RS02535 0.23 +1.1 536,118 + ABZR87_RS02535 0.23 -1.8 536,118 + ABZR87_RS02535 0.23 +1.9 536,119 - ABZR87_RS02535 0.23 +1.4 536,119 - ABZR87_RS02535 0.23 -0.6 536,119 - ABZR87_RS02535 0.23 +0.4 536,119 - ABZR87_RS02535 0.23 -2.3 536,119 - ABZR87_RS02535 0.23 -0.1 536,241 + ABZR87_RS02535 0.42 -1.8 536,241 + ABZR87_RS02535 0.42 -1.0 536,242 - ABZR87_RS02535 0.42 +0.4 536,242 - ABZR87_RS02535 0.42 -0.9 536,283 + ABZR87_RS02535 0.49 -1.3 536,283 - ABZR87_RS02535 0.49 -0.7 536,284 - ABZR87_RS02535 0.49 -1.0 536,284 - ABZR87_RS02535 0.49 -0.6
Or see this region's nucleotide sequence