Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20125

Experiment: L-Citrulline (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (N)
4,348,606	-		RR42_RS20120	0.53	+0.4
4,348,737	+		RR42_RS20120	0.64	-0.8
4,348,737	+		RR42_RS20120	0.64	+0.4
4,348,738	-		RR42_RS20120	0.64	-0.2
4,348,738	-		RR42_RS20120	0.64	+0.5
4,348,785	+		RR42_RS20120	0.69	+0.3
4,348,785	+		RR42_RS20120	0.69	-2.2
4,348,786	-		RR42_RS20120	0.69	+0.6
4,348,917	-		RR42_RS20120	0.80	-1.5
4,348,917	-		RR42_RS20120	0.80	+0.3
4,349,008	-		RR42_RS20120	0.88	-0.3
4,349,160	+				-0.1
4,349,160	+				+0.7
4,349,160	+				+0.7
4,349,160	+				+0.5
4,349,161	-				-1.9
4,349,161	-				+0.8
4,349,161	-				+0.5
4,349,164	+				-0.4
4,349,164	+				-0.0
4,349,164	+				+0.5
4,349,164	+				-0.1
4,349,165	-				-0.5
4,349,165	-				-0.5
4,349,165	-				+1.7
4,349,165	-				+0.5
4,349,165	-				+1.1
4,349,165	-				-0.7
4,349,165	-				-0.4
4,349,165	-				+1.3
4,349,171	+				+0.1
4,349,172	-				+2.3
4,349,172	-				+0.8
4,349,172	-				-0.9
4,349,172	-				+0.2
4,349,172	-				-1.7
4,349,172	-				+0.4
4,349,173	+				-0.1
4,349,174	-				+1.0
4,349,236	-				+0.3
4,349,236	-				-0.3
4,349,382	-				-2.1
4,349,451	+				-2.9
4,349,547	+				-0.6
4,349,547	+				-0.0
4,349,547	+				-2.1
4,349,547	+				-0.9
4,349,548	-				-2.1
4,349,548	-				-1.2
4,349,548	-				-0.5
4,349,548	-				-2.7
4,349,625	+				-0.7
4,349,701	+		RR42_RS20125	0.10	-2.1
4,349,702	-		RR42_RS20125	0.10	-1.5
4,349,702	-		RR42_RS20125	0.10	-3.1
4,349,702	-		RR42_RS20125	0.10	-0.7
4,349,702	-		RR42_RS20125	0.10	-1.9
4,349,702	-		RR42_RS20125	0.10	-1.9
4,349,959	+		RR42_RS20125	0.17	-1.0
4,349,960	-		RR42_RS20125	0.17	-1.4
4,349,960	-		RR42_RS20125	0.17	-3.6
4,349,960	-		RR42_RS20125	0.17	+0.3
4,349,960	-		RR42_RS20125	0.17	-0.5
4,350,041	+		RR42_RS20125	0.19	-2.8
4,350,042	-		RR42_RS20125	0.19	-1.6
4,350,042	-		RR42_RS20125	0.19	-4.3
4,350,056	-		RR42_RS20125	0.19	-2.6
4,350,356	+		RR42_RS20125	0.27	-1.9
4,351,012	+		RR42_RS20125	0.43	-1.7
4,351,015	+		RR42_RS20125	0.43	-2.0
4,351,015	+		RR42_RS20125	0.43	-1.2
4,351,447	+		RR42_RS20125	0.54	-2.7
4,351,448	-		RR42_RS20125	0.54	-2.9
4,351,448	-		RR42_RS20125	0.54	-2.2
4,351,628	-		RR42_RS20125	0.58	-0.9
4,351,663	+		RR42_RS20125	0.59	-2.2
4,351,759	+		RR42_RS20125	0.62	-0.8
4,351,760	-		RR42_RS20125	0.62	-2.6
4,351,771	+		RR42_RS20125	0.62	-1.9
4,351,771	+		RR42_RS20125	0.62	-2.5
4,351,772	-		RR42_RS20125	0.62	-1.1
4,351,774	+		RR42_RS20125	0.62	-3.1
4,351,774	+		RR42_RS20125	0.62	-2.0
4,351,774	+		RR42_RS20125	0.62	-1.4
4,351,774	+		RR42_RS20125	0.62	-3.3
4,351,774	+		RR42_RS20125	0.62	-1.1
4,351,774	+		RR42_RS20125	0.62	-1.3
4,351,774	+		RR42_RS20125	0.62	-2.6
4,351,774	+		RR42_RS20125	0.62	-2.4
4,351,774	+		RR42_RS20125	0.62	-2.3
4,351,774	+		RR42_RS20125	0.62	-2.3
4,351,774	+		RR42_RS20125	0.62	-2.6
4,351,774	+		RR42_RS20125	0.62	-2.4
4,351,774	+		RR42_RS20125	0.62	-1.3
4,351,774	+		RR42_RS20125	0.62	-0.2
4,351,774	+		RR42_RS20125	0.62	-0.3
4,351,775	-		RR42_RS20125	0.62	+1.8
4,351,775	-		RR42_RS20125	0.62	-3.0
4,351,775	-		RR42_RS20125	0.62	-2.2
4,351,775	-		RR42_RS20125	0.62	-2.1
4,351,775	-		RR42_RS20125	0.62	-1.4
4,351,775	-		RR42_RS20125	0.62	-2.1
4,351,775	-		RR42_RS20125	0.62	-0.5
4,351,795	+		RR42_RS20125	0.63	-0.2
4,351,795	+		RR42_RS20125	0.63	-0.1
4,351,795	+		RR42_RS20125	0.63	-1.2
4,351,795	+		RR42_RS20125	0.63	-2.3
4,351,796	-		RR42_RS20125	0.63	-1.7
4,351,796	-		RR42_RS20125	0.63	-1.9
4,351,796	-		RR42_RS20125	0.63	-4.1
4,351,796	-		RR42_RS20125	0.63	-2.9
4,351,840	+		RR42_RS20125	0.64	-2.1
4,351,840	+		RR42_RS20125	0.64	-1.7
4,351,881	+		RR42_RS20125	0.65	-1.1
4,351,885	+		RR42_RS20125	0.65	-1.1
4,351,885	+		RR42_RS20125	0.65	-1.5
4,351,885	+		RR42_RS20125	0.65	-2.2
4,351,885	+		RR42_RS20125	0.65	-2.4
4,351,885	+		RR42_RS20125	0.65	-2.2
4,351,885	+		RR42_RS20125	0.65	+0.8
4,351,885	+		RR42_RS20125	0.65	-1.7
4,351,886	-		RR42_RS20125	0.65	-1.1
4,351,898	+		RR42_RS20125	0.65	-2.1
4,351,899	-		RR42_RS20125	0.65	-0.9
4,351,900	+		RR42_RS20125	0.65	-0.6
4,351,900	+		RR42_RS20125	0.65	-2.8
4,351,900	+		RR42_RS20125	0.65	-2.1
4,351,901	-		RR42_RS20125	0.65	-1.3
4,351,901	-		RR42_RS20125	0.65	-1.1
4,351,901	-		RR42_RS20125	0.65	-1.9
4,351,916	-		RR42_RS20125	0.66	-2.1
4,351,924	+		RR42_RS20125	0.66	+1.3
4,352,036	-		RR42_RS20125	0.69	-1.5
4,352,036	-		RR42_RS20125	0.69	-0.9
4,352,177	+		RR42_RS20125	0.72	-0.9
4,352,178	-		RR42_RS20125	0.72	-1.7
4,352,194	+		RR42_RS20125	0.73	-1.1
4,352,194	+		RR42_RS20125	0.73	-0.5
4,352,195	-		RR42_RS20125	0.73	-2.0
4,352,233	+		RR42_RS20125	0.73	-2.4
4,352,234	-		RR42_RS20125	0.74	-1.7
4,352,234	-		RR42_RS20125	0.74	-1.2
4,352,234	-		RR42_RS20125	0.74	-1.9
4,352,234	-		RR42_RS20125	0.74	-1.6
4,352,270	+		RR42_RS20125	0.74	-1.1
4,352,270	+		RR42_RS20125	0.74	-1.8
4,352,271	-		RR42_RS20125	0.74	-1.5
4,352,271	-		RR42_RS20125	0.74	-1.9
4,352,273	-		RR42_RS20125	0.74	-2.7
4,352,320	+		RR42_RS20125	0.76	+0.3
4,352,320	+		RR42_RS20125	0.76	-0.5
4,352,320	+		RR42_RS20125	0.76	-2.8
4,352,320	+		RR42_RS20125	0.76	-2.1
4,352,320	+		RR42_RS20125	0.76	-2.5
4,352,320	+		RR42_RS20125	0.76	-2.7
4,352,320	+		RR42_RS20125	0.76	-2.4
4,352,320	+		RR42_RS20125	0.76	-0.3
4,352,320	+		RR42_RS20125	0.76	-1.0
4,352,320	+		RR42_RS20125	0.76	-2.5
4,352,321	-		RR42_RS20125	0.76	-2.4
4,352,321	-		RR42_RS20125	0.76	-1.3
4,352,321	-		RR42_RS20125	0.76	-0.9
4,352,321	-		RR42_RS20125	0.76	-0.9
4,352,321	-		RR42_RS20125	0.76	-2.0
4,352,321	-		RR42_RS20125	0.76	-1.9
4,352,321	-		RR42_RS20125	0.76	-0.6
4,352,321	-		RR42_RS20125	0.76	-2.3
4,352,371	+		RR42_RS20125	0.77	-2.3
4,352,371	+		RR42_RS20125	0.77	-1.3
4,352,372	-		RR42_RS20125	0.77	-1.5
4,352,383	+		RR42_RS20125	0.77	-1.6
4,352,383	+		RR42_RS20125	0.77	-2.7
4,352,383	+		RR42_RS20125	0.77	-1.4
4,352,383	+		RR42_RS20125	0.77	-2.4
4,352,383	+		RR42_RS20125	0.77	-1.6
4,352,431	+		RR42_RS20125	0.78	-0.4
4,352,431	+		RR42_RS20125	0.78	-3.5
4,352,431	+		RR42_RS20125	0.78	-1.9
4,352,431	+		RR42_RS20125	0.78	-1.2
4,352,458	+		RR42_RS20125	0.79	-2.2
4,352,458	+		RR42_RS20125	0.79	+0.7
4,352,458	+		RR42_RS20125	0.79	-4.1
4,352,459	-		RR42_RS20125	0.79	-3.3
4,352,618	+		RR42_RS20125	0.83	-0.2
4,352,618	+		RR42_RS20125	0.83	-1.3
4,352,619	-		RR42_RS20125	0.83	-1.7
4,352,619	-		RR42_RS20125	0.83	-1.7
4,353,057	+				-1.3
4,353,175	+				-2.7
4,353,175	+				-3.6
4,353,176	-				-1.6
4,353,310	-				-1.2
4,353,310	-				+0.4
4,353,310	-				+0.7
4,353,365	+				-1.0
4,353,365	+				-1.5
4,353,366	-				-0.2
4,353,392	+				-0.8
4,353,396	+				+1.3
4,353,397	-				-1.2