Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS19505 and HSERO_RS19510 are separated by 346 nucleotides HSERO_RS19510 and HSERO_RS19515 are separated by 83 nucleotides
HSERO_RS19505: HSERO_RS19505 - membrane protein, at 4,471,372 to 4,471,863
_RS19505
HSERO_RS19510: HSERO_RS19510 - threonine dehydratase, at 4,472,210 to 4,473,736
_RS19510
HSERO_RS19515: HSERO_RS19515 - 7-cyano-7-deazaguanine reductase, at 4,473,820 to 4,474,695
_RS19515
Position (kb) 4472
4473
4474 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 4471.285 kb on - strand at 4471.398 kb on + strand at 4471.599 kb on - strand, within HSERO_RS19505 at 4471.670 kb on + strand, within HSERO_RS19505 at 4471.789 kb on - strand, within HSERO_RS19505 at 4471.801 kb on + strand, within HSERO_RS19505 at 4471.809 kb on - strand, within HSERO_RS19505 at 4472.186 kb on + strand at 4472.196 kb on - strand at 4472.201 kb on - strand at 4472.284 kb on + strand at 4472.355 kb on + strand at 4472.363 kb on - strand, within HSERO_RS19510 at 4472.363 kb on - strand, within HSERO_RS19510 at 4472.385 kb on - strand, within HSERO_RS19510 at 4472.719 kb on - strand, within HSERO_RS19510 at 4472.863 kb on - strand, within HSERO_RS19510 at 4472.888 kb on - strand, within HSERO_RS19510 at 4472.948 kb on - strand, within HSERO_RS19510 at 4473.078 kb on - strand, within HSERO_RS19510 at 4473.114 kb on - strand, within HSERO_RS19510 at 4473.148 kb on + strand, within HSERO_RS19510 at 4473.161 kb on + strand, within HSERO_RS19510 at 4473.313 kb on + strand, within HSERO_RS19510 at 4473.481 kb on - strand, within HSERO_RS19510 at 4473.488 kb on + strand, within HSERO_RS19510 at 4473.496 kb on - strand, within HSERO_RS19510 at 4473.679 kb on + strand at 4473.723 kb on - strand at 4473.787 kb on - strand at 4473.804 kb on + strand at 4473.887 kb on - strand at 4473.976 kb on - strand, within HSERO_RS19515 at 4474.471 kb on + strand, within HSERO_RS19515 at 4474.543 kb on - strand, within HSERO_RS19515 at 4474.691 kb on + strand at 4474.731 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 4,471,285 - +1.4 4,471,398 + -0.3 4,471,599 - HSERO_RS19505 0.46 -0.6 4,471,670 + HSERO_RS19505 0.61 -0.3 4,471,789 - HSERO_RS19505 0.85 +0.2 4,471,801 + HSERO_RS19505 0.87 +0.2 4,471,809 - HSERO_RS19505 0.89 -0.7 4,472,186 + -0.3 4,472,196 - -4.9 4,472,201 - -1.6 4,472,284 + -4.4 4,472,355 + -4.5 4,472,363 - HSERO_RS19510 0.10 -3.0 4,472,363 - HSERO_RS19510 0.10 -5.3 4,472,385 - HSERO_RS19510 0.11 -3.7 4,472,719 - HSERO_RS19510 0.33 -3.4 4,472,863 - HSERO_RS19510 0.43 -3.3 4,472,888 - HSERO_RS19510 0.44 -2.3 4,472,948 - HSERO_RS19510 0.48 -2.8 4,473,078 - HSERO_RS19510 0.57 -2.2 4,473,114 - HSERO_RS19510 0.59 -3.3 4,473,148 + HSERO_RS19510 0.61 -3.5 4,473,161 + HSERO_RS19510 0.62 -2.9 4,473,313 + HSERO_RS19510 0.72 -3.0 4,473,481 - HSERO_RS19510 0.83 +1.4 4,473,488 + HSERO_RS19510 0.84 -2.6 4,473,496 - HSERO_RS19510 0.84 -4.8 4,473,679 + -4.1 4,473,723 - -2.4 4,473,787 - +0.3 4,473,804 + -0.3 4,473,887 - -0.3 4,473,976 - HSERO_RS19515 0.18 -0.1 4,474,471 + HSERO_RS19515 0.74 -0.0 4,474,543 - HSERO_RS19515 0.83 +1.5 4,474,691 + +1.2 4,474,731 + +1.5
Or see this region's nucleotide sequence