Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01505 and HSERO_RS01510 are separated by 55 nucleotides HSERO_RS01510 and HSERO_RS01515 are separated by 568 nucleotides
HSERO_RS01505: HSERO_RS01505 - transketolase, at 326,260 to 327,225
_RS01505
HSERO_RS01510: HSERO_RS01510 - membrane protein, at 327,281 to 328,219
_RS01510
HSERO_RS01515: HSERO_RS01515 - hemin-binding protein, at 328,788 to 330,488
_RS01515
Position (kb) 327
328
329 Strain fitness (log2 ratio) -2
-1
0
1 at 326.330 kb on + strand at 326.476 kb on + strand, within HSERO_RS01505 at 326.814 kb on + strand, within HSERO_RS01505 at 326.899 kb on - strand, within HSERO_RS01505 at 326.996 kb on - strand, within HSERO_RS01505 at 327.181 kb on + strand at 327.271 kb on + strand at 327.332 kb on - strand at 327.714 kb on + strand, within HSERO_RS01510 at 327.724 kb on + strand, within HSERO_RS01510 at 327.840 kb on + strand, within HSERO_RS01510 at 327.856 kb on - strand, within HSERO_RS01510 at 327.916 kb on + strand, within HSERO_RS01510 at 327.946 kb on + strand, within HSERO_RS01510 at 328.145 kb on + strand at 328.145 kb on + strand at 328.393 kb on + strand at 328.401 kb on - strand at 328.458 kb on + strand at 328.630 kb on + strand at 328.630 kb on + strand at 328.874 kb on + strand at 328.879 kb on - strand at 328.971 kb on - strand at 328.971 kb on - strand, within HSERO_RS01515 at 329.131 kb on + strand, within HSERO_RS01515 at 329.168 kb on + strand, within HSERO_RS01515 at 329.176 kb on - strand, within HSERO_RS01515 at 329.181 kb on - strand, within HSERO_RS01515
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 326,330 + -0.1 326,476 + HSERO_RS01505 0.22 -0.5 326,814 + HSERO_RS01505 0.57 -2.2 326,899 - HSERO_RS01505 0.66 +0.4 326,996 - HSERO_RS01505 0.76 +0.6 327,181 + +0.5 327,271 + +0.1 327,332 - -0.2 327,714 + HSERO_RS01510 0.46 -0.6 327,724 + HSERO_RS01510 0.47 -1.2 327,840 + HSERO_RS01510 0.60 -1.4 327,856 - HSERO_RS01510 0.61 +0.1 327,916 + HSERO_RS01510 0.68 -0.4 327,946 + HSERO_RS01510 0.71 -0.9 328,145 + -0.3 328,145 + -0.7 328,393 + +0.0 328,401 - -0.1 328,458 + +0.1 328,630 + -0.5 328,630 + +0.2 328,874 + +0.8 328,879 - +0.1 328,971 - -1.2 328,971 - HSERO_RS01515 0.11 -0.7 329,131 + HSERO_RS01515 0.20 -1.4 329,168 + HSERO_RS01515 0.22 +0.2 329,176 - HSERO_RS01515 0.23 -0.1 329,181 - HSERO_RS01515 0.23 +0.9
Or see this region's nucleotide sequence