Experiment: Thallium(I) acetate 0.0009765625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_0490 and Synpcc7942_0491 are separated by 259 nucleotides Synpcc7942_0491 and ribF are separated by 39 nucleotides
Synpcc7942_0490: Synpcc7942_0490 - diguanylate cyclase with PAS/PAC sensor, at 477,395 to 479,440
_0490
Synpcc7942_0491: Synpcc7942_0491 - hypothetical protein, at 479,700 to 479,837
_0491
Synpcc7942_0492: ribF - bifunctional riboflavin kinase/FMN adenylyltransferase, at 479,877 to 480,824
ribF
Position (kb) 479
480 Strain fitness (log2 ratio) -2
-1
0
1
2 at 478.757 kb on - strand, within Synpcc7942_0490 at 478.769 kb on + strand, within Synpcc7942_0490 at 479.032 kb on - strand, within Synpcc7942_0490 at 479.116 kb on + strand, within Synpcc7942_0490 at 479.116 kb on + strand, within Synpcc7942_0490 at 479.123 kb on - strand, within Synpcc7942_0490 at 479.125 kb on + strand, within Synpcc7942_0490 at 479.185 kb on + strand, within Synpcc7942_0490 at 479.185 kb on + strand, within Synpcc7942_0490 at 479.185 kb on + strand, within Synpcc7942_0490 at 479.193 kb on - strand, within Synpcc7942_0490 at 479.220 kb on + strand, within Synpcc7942_0490 at 479.220 kb on + strand, within Synpcc7942_0490 at 479.271 kb on + strand at 479.312 kb on - strand at 479.346 kb on - strand at 479.392 kb on + strand at 479.473 kb on + strand at 479.473 kb on + strand at 479.620 kb on - strand at 479.655 kb on - strand at 479.658 kb on + strand at 479.666 kb on - strand at 479.737 kb on - strand, within Synpcc7942_0491 at 479.737 kb on - strand, within Synpcc7942_0491 at 479.737 kb on - strand, within Synpcc7942_0491 at 479.737 kb on - strand, within Synpcc7942_0491 at 479.762 kb on + strand, within Synpcc7942_0491 at 479.770 kb on - strand, within Synpcc7942_0491 at 479.781 kb on - strand, within Synpcc7942_0491 at 479.788 kb on + strand, within Synpcc7942_0491 at 479.804 kb on + strand, within Synpcc7942_0491 at 479.811 kb on + strand, within Synpcc7942_0491 at 479.820 kb on - strand, within Synpcc7942_0491 at 479.832 kb on - strand at 479.849 kb on - strand at 479.899 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0009765625 mg/ml remove 478,757 - Synpcc7942_0490 0.67 +1.2 478,769 + Synpcc7942_0490 0.67 +2.6 479,032 - Synpcc7942_0490 0.80 -0.8 479,116 + Synpcc7942_0490 0.84 -2.5 479,116 + Synpcc7942_0490 0.84 +2.3 479,123 - Synpcc7942_0490 0.84 -0.4 479,125 + Synpcc7942_0490 0.85 +1.7 479,185 + Synpcc7942_0490 0.87 -0.2 479,185 + Synpcc7942_0490 0.87 +1.1 479,185 + Synpcc7942_0490 0.87 +0.9 479,193 - Synpcc7942_0490 0.88 +0.8 479,220 + Synpcc7942_0490 0.89 +1.3 479,220 + Synpcc7942_0490 0.89 +1.5 479,271 + +0.3 479,312 - +1.1 479,346 - +2.0 479,392 + +2.7 479,473 + +0.7 479,473 + +0.3 479,620 - +0.1 479,655 - +0.3 479,658 + -0.5 479,666 - +1.6 479,737 - Synpcc7942_0491 0.27 +0.5 479,737 - Synpcc7942_0491 0.27 +0.1 479,737 - Synpcc7942_0491 0.27 +0.1 479,737 - Synpcc7942_0491 0.27 +1.1 479,762 + Synpcc7942_0491 0.45 -0.2 479,770 - Synpcc7942_0491 0.51 -1.2 479,781 - Synpcc7942_0491 0.59 -0.9 479,788 + Synpcc7942_0491 0.64 +0.9 479,804 + Synpcc7942_0491 0.75 +0.3 479,811 + Synpcc7942_0491 0.80 -1.5 479,820 - Synpcc7942_0491 0.87 +1.5 479,832 - +2.5 479,849 - -0.5 479,899 + +1.6
Or see this region's nucleotide sequence