Experiment: Thallium(I) acetate 0.0009765625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_0346 and Synpcc7942_0347 are separated by 156 nucleotides Synpcc7942_0347 and recA are separated by 245 nucleotides recA and Synpcc7942_0349 are separated by 114 nucleotides
Synpcc7942_0346: Synpcc7942_0346 - Protein of unknown function DUF152, at 339,352 to 340,131
_0346
Synpcc7942_0347: Synpcc7942_0347 - hypothetical protein, at 340,288 to 340,452
_0347
Synpcc7942_0348: recA - recombinase A, at 340,698 to 341,768
recA
Synpcc7942_0349: Synpcc7942_0349 - hypothetical protein, at 341,883 to 342,443
_0349
Position (kb)
340
341
342 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 339.830 kb on - strand, within Synpcc7942_0346 at 339.830 kb on - strand, within Synpcc7942_0346 at 339.847 kb on + strand, within Synpcc7942_0346 at 339.937 kb on + strand, within Synpcc7942_0346 at 340.034 kb on - strand, within Synpcc7942_0346 at 340.095 kb on + strand at 340.140 kb on + strand at 340.196 kb on - strand at 340.222 kb on + strand at 340.222 kb on + strand at 340.222 kb on + strand at 340.222 kb on + strand at 340.222 kb on + strand at 340.230 kb on - strand at 340.230 kb on - strand at 340.230 kb on - strand at 340.344 kb on - strand, within Synpcc7942_0347 at 340.373 kb on + strand, within Synpcc7942_0347 at 340.373 kb on + strand, within Synpcc7942_0347 at 340.373 kb on + strand, within Synpcc7942_0347 at 340.381 kb on - strand, within Synpcc7942_0347 at 340.429 kb on + strand, within Synpcc7942_0347 at 340.447 kb on + strand at 340.492 kb on - strand at 340.492 kb on - strand at 340.531 kb on + strand at 340.531 kb on + strand at 340.539 kb on + strand at 340.539 kb on + strand at 340.539 kb on - strand at 340.578 kb on + strand at 340.589 kb on - strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.591 kb on + strand at 340.599 kb on - strand at 340.599 kb on - strand at 340.599 kb on - strand at 340.599 kb on - strand at 340.599 kb on - strand at 340.599 kb on - strand at 340.599 kb on - strand at 340.599 kb on - strand at 340.599 kb on - strand at 340.599 kb on - strand at 340.599 kb on - strand at 340.599 kb on - strand at 340.599 kb on - strand at 340.599 kb on - strand at 340.599 kb on - strand at 340.603 kb on + strand at 340.606 kb on - strand at 340.610 kb on + strand at 340.610 kb on + strand at 340.610 kb on + strand at 340.611 kb on - strand at 340.618 kb on - strand at 340.696 kb on + strand at 340.720 kb on - strand at 341.765 kb on + strand at 341.800 kb on - strand at 341.838 kb on + strand at 341.851 kb on + strand at 341.851 kb on + strand at 341.859 kb on - strand at 341.859 kb on - strand at 341.880 kb on + strand at 341.880 kb on + strand at 341.880 kb on + strand at 341.882 kb on + strand at 341.888 kb on - strand at 341.900 kb on - strand at 341.906 kb on - strand at 341.934 kb on - strand at 341.965 kb on + strand, within Synpcc7942_0349 at 341.965 kb on - strand, within Synpcc7942_0349 at 342.009 kb on + strand, within Synpcc7942_0349 at 342.019 kb on + strand, within Synpcc7942_0349 at 342.027 kb on - strand, within Synpcc7942_0349 at 342.032 kb on - strand, within Synpcc7942_0349 at 342.032 kb on - strand, within Synpcc7942_0349 at 342.073 kb on - strand, within Synpcc7942_0349 at 342.079 kb on + strand, within Synpcc7942_0349 at 342.167 kb on + strand, within Synpcc7942_0349 at 342.167 kb on + strand, within Synpcc7942_0349 at 342.170 kb on - strand, within Synpcc7942_0349 at 342.175 kb on - strand, within Synpcc7942_0349 at 342.175 kb on - strand, within Synpcc7942_0349 at 342.190 kb on + strand, within Synpcc7942_0349 at 342.198 kb on - strand, within Synpcc7942_0349 at 342.209 kb on + strand, within Synpcc7942_0349 at 342.285 kb on + strand, within Synpcc7942_0349 at 342.286 kb on - strand, within Synpcc7942_0349 at 342.344 kb on - strand, within Synpcc7942_0349 at 342.359 kb on + strand, within Synpcc7942_0349 at 342.359 kb on + strand, within Synpcc7942_0349 at 342.359 kb on + strand, within Synpcc7942_0349 at 342.393 kb on + strand at 342.450 kb on + strand at 342.450 kb on + strand at 342.458 kb on - strand at 342.473 kb on + strand at 342.473 kb on + strand at 342.475 kb on + strand at 342.488 kb on + strand at 342.529 kb on + strand at 342.544 kb on - strand at 342.549 kb on - strand at 342.549 kb on - strand at 342.549 kb on - strand at 342.556 kb on + strand at 342.559 kb on - strand at 342.564 kb on - strand at 342.569 kb on - strand at 342.592 kb on - strand at 342.610 kb on - strand at 342.647 kb on - strand at 342.647 kb on - strand at 342.689 kb on + strand at 342.689 kb on - strand at 342.694 kb on - strand at 342.694 kb on - strand at 342.699 kb on + strand at 342.706 kb on + strand at 342.706 kb on + strand at 342.709 kb on - strand at 342.711 kb on + strand at 342.711 kb on + strand at 342.719 kb on - strand at 342.719 kb on - strand at 342.731 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0009765625 mg/ml remove 339,830 - Synpcc7942_0346 0.61 -2.5 339,830 - Synpcc7942_0346 0.61 -2.5 339,847 + Synpcc7942_0346 0.63 -1.5 339,937 + Synpcc7942_0346 0.75 -3.5 340,034 - Synpcc7942_0346 0.87 -1.1 340,095 + +0.1 340,140 + -0.5 340,196 - -0.5 340,222 + -2.1 340,222 + +0.3 340,222 + -2.5 340,222 + -4.1 340,222 + -0.9 340,230 - -0.3 340,230 - -2.5 340,230 - -2.1 340,344 - Synpcc7942_0347 0.34 -1.5 340,373 + Synpcc7942_0347 0.52 -4.1 340,373 + Synpcc7942_0347 0.52 -3.9 340,373 + Synpcc7942_0347 0.52 -2.5 340,381 - Synpcc7942_0347 0.56 -2.2 340,429 + Synpcc7942_0347 0.85 -4.3 340,447 + -2.5 340,492 - -0.8 340,492 - +0.2 340,531 + +3.3 340,531 + -0.8 340,539 + +1.1 340,539 + +0.9 340,539 - +0.3 340,578 + +1.1 340,589 - +0.2 340,591 + -0.5 340,591 + +0.3 340,591 + +0.2 340,591 + +1.1 340,591 + -2.5 340,591 + -2.5 340,591 + -0.1 340,591 + -1.3 340,591 + +1.6 340,591 + +0.1 340,591 + +0.2 340,591 + -0.8 340,591 + +1.3 340,591 + -0.2 340,591 + -0.5 340,591 + +0.8 340,591 + -1.5 340,591 + +0.1 340,599 - +0.1 340,599 - -0.8 340,599 - -2.5 340,599 - +1.5 340,599 - -1.5 340,599 - +1.1 340,599 - -1.3 340,599 - +0.1 340,599 - +0.1 340,599 - -1.9 340,599 - -3.1 340,599 - +1.2 340,599 - +0.8 340,599 - -1.5 340,599 - +0.1 340,603 + -0.5 340,606 - -2.1 340,610 + +0.9 340,610 + +0.3 340,610 + +0.1 340,611 - +0.8 340,618 - -0.9 340,696 + +0.1 340,720 - -1.5 341,765 + +2.9 341,800 - -3.1 341,838 + -1.5 341,851 + -1.5 341,851 + -0.8 341,859 - -2.5 341,859 - +0.9 341,880 + -3.1 341,880 + +0.1 341,880 + -0.5 341,882 + -1.1 341,888 - +0.8 341,900 - -1.5 341,906 - -0.5 341,934 - -0.9 341,965 + Synpcc7942_0349 0.15 -2.5 341,965 - Synpcc7942_0349 0.15 -1.2 342,009 + Synpcc7942_0349 0.22 -1.5 342,019 + Synpcc7942_0349 0.24 -1.5 342,027 - Synpcc7942_0349 0.26 -0.5 342,032 - Synpcc7942_0349 0.27 -0.4 342,032 - Synpcc7942_0349 0.27 -0.5 342,073 - Synpcc7942_0349 0.34 -0.9 342,079 + Synpcc7942_0349 0.35 -0.4 342,167 + Synpcc7942_0349 0.51 -0.5 342,167 + Synpcc7942_0349 0.51 -2.5 342,170 - Synpcc7942_0349 0.51 +0.1 342,175 - Synpcc7942_0349 0.52 +0.8 342,175 - Synpcc7942_0349 0.52 -1.5 342,190 + Synpcc7942_0349 0.55 -0.9 342,198 - Synpcc7942_0349 0.56 -1.5 342,209 + Synpcc7942_0349 0.58 +0.8 342,285 + Synpcc7942_0349 0.72 -1.5 342,286 - Synpcc7942_0349 0.72 +0.5 342,344 - Synpcc7942_0349 0.82 -0.7 342,359 + Synpcc7942_0349 0.85 -2.5 342,359 + Synpcc7942_0349 0.85 -2.5 342,359 + Synpcc7942_0349 0.85 -0.1 342,393 + -2.9 342,450 + -0.1 342,450 + +1.3 342,458 - -0.5 342,473 + +0.5 342,473 + +1.4 342,475 + +0.5 342,488 + +2.2 342,529 + -1.5 342,544 - +0.8 342,549 - +0.5 342,549 - +0.2 342,549 - -0.1 342,556 + +1.6 342,559 - -0.3 342,564 - -0.1 342,569 - +1.9 342,592 - +0.5 342,610 - +1.6 342,647 - +1.5 342,647 - +1.4 342,689 + -2.9 342,689 - -0.8 342,694 - +1.4 342,694 - +0.8 342,699 + -1.9 342,706 + +0.6 342,706 + +0.1 342,709 - +0.2 342,711 + -1.5 342,711 + +1.5 342,719 - -0.5 342,719 - +0.6 342,731 + +3.8
Or see this region's nucleotide sequence