Experiment: Thallium(I) acetate 0.0009765625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_0342 and psb27 are separated by 63 nucleotides psb27 and Synpcc7942_0344 are separated by 352 nucleotides Synpcc7942_0344 and birA are separated by 84 nucleotides birA and Synpcc7942_0346 are separated by 45 nucleotides
Synpcc7942_0342: Synpcc7942_0342 - hypothetical protein, at 336,363 to 336,590
_0342
Synpcc7942_0343: psb27 - photosystem II 11 kD protein, at 336,654 to 337,055
psb27
Synpcc7942_0344: Synpcc7942_0344 - probable peptidase, at 337,408 to 338,451
_0344
Synpcc7942_0345: birA - Biotin--acetyl-CoA-carboxylase ligase, at 338,536 to 339,306
birA
Synpcc7942_0346: Synpcc7942_0346 - Protein of unknown function DUF152, at 339,352 to 340,131
_0346
Position (kb) 337
338
339 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 336.425 kb on - strand, within Synpcc7942_0342 at 336.452 kb on + strand, within Synpcc7942_0342 at 336.468 kb on + strand, within Synpcc7942_0342 at 336.498 kb on + strand, within Synpcc7942_0342 at 336.504 kb on + strand, within Synpcc7942_0342 at 336.506 kb on - strand, within Synpcc7942_0342 at 336.512 kb on - strand, within Synpcc7942_0342 at 336.544 kb on - strand, within Synpcc7942_0342 at 336.544 kb on - strand, within Synpcc7942_0342 at 336.563 kb on - strand, within Synpcc7942_0342 at 336.590 kb on + strand at 336.640 kb on + strand at 336.769 kb on - strand, within psb27 at 336.774 kb on + strand, within psb27 at 336.774 kb on + strand, within psb27 at 336.814 kb on - strand, within psb27 at 336.838 kb on + strand, within psb27 at 336.933 kb on + strand, within psb27 at 337.050 kb on + strand at 337.050 kb on + strand at 337.050 kb on + strand at 337.058 kb on - strand at 337.058 kb on - strand at 337.058 kb on - strand at 337.058 kb on - strand at 337.058 kb on - strand at 337.101 kb on + strand at 337.107 kb on + strand at 337.200 kb on + strand at 337.200 kb on + strand at 337.200 kb on + strand at 337.201 kb on + strand at 337.201 kb on + strand at 337.201 kb on + strand at 337.201 kb on + strand at 337.201 kb on + strand at 337.201 kb on + strand at 337.201 kb on + strand at 337.201 kb on + strand at 337.209 kb on - strand at 337.209 kb on - strand at 337.209 kb on - strand at 337.209 kb on - strand at 337.209 kb on - strand at 337.222 kb on - strand at 337.224 kb on + strand at 337.236 kb on + strand at 337.245 kb on - strand at 337.249 kb on + strand at 337.257 kb on + strand at 337.257 kb on + strand at 337.327 kb on + strand at 337.364 kb on + strand at 337.405 kb on + strand at 337.405 kb on + strand at 337.412 kb on + strand at 337.412 kb on + strand at 337.413 kb on - strand at 337.420 kb on - strand at 337.431 kb on + strand at 337.442 kb on + strand at 337.486 kb on + strand at 337.489 kb on + strand at 337.540 kb on + strand, within Synpcc7942_0344 at 337.563 kb on - strand, within Synpcc7942_0344 at 337.593 kb on - strand, within Synpcc7942_0344 at 337.707 kb on + strand, within Synpcc7942_0344 at 337.719 kb on - strand, within Synpcc7942_0344 at 337.814 kb on + strand, within Synpcc7942_0344 at 337.821 kb on - strand, within Synpcc7942_0344 at 337.821 kb on - strand, within Synpcc7942_0344 at 337.846 kb on + strand, within Synpcc7942_0344 at 337.854 kb on - strand, within Synpcc7942_0344 at 337.854 kb on - strand, within Synpcc7942_0344 at 337.870 kb on + strand, within Synpcc7942_0344 at 337.870 kb on + strand, within Synpcc7942_0344 at 337.880 kb on + strand at 337.951 kb on - strand, within Synpcc7942_0344 at 337.958 kb on + strand, within Synpcc7942_0344 at 337.966 kb on - strand, within Synpcc7942_0344 at 337.980 kb on + strand, within Synpcc7942_0344 at 338.009 kb on + strand, within Synpcc7942_0344 at 338.009 kb on + strand, within Synpcc7942_0344 at 338.017 kb on - strand, within Synpcc7942_0344 at 338.042 kb on - strand, within Synpcc7942_0344 at 338.046 kb on - strand, within Synpcc7942_0344 at 338.121 kb on - strand, within Synpcc7942_0344 at 338.220 kb on + strand, within Synpcc7942_0344 at 338.281 kb on + strand, within Synpcc7942_0344 at 338.320 kb on - strand, within Synpcc7942_0344 at 338.320 kb on - strand, within Synpcc7942_0344 at 338.331 kb on - strand, within Synpcc7942_0344 at 338.379 kb on - strand at 338.402 kb on + strand at 338.405 kb on - strand at 338.421 kb on - strand at 338.435 kb on - strand at 338.435 kb on - strand at 338.437 kb on - strand at 338.446 kb on + strand at 338.454 kb on - strand at 338.454 kb on - strand at 338.463 kb on - strand at 338.464 kb on - strand at 338.480 kb on + strand at 338.485 kb on - strand at 338.488 kb on - strand at 338.492 kb on + strand at 338.492 kb on + strand at 338.515 kb on - strand at 338.534 kb on + strand at 338.566 kb on - strand at 339.336 kb on + strand at 339.344 kb on + strand at 339.371 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0009765625 mg/ml remove 336,425 - Synpcc7942_0342 0.27 -1.5 336,452 + Synpcc7942_0342 0.39 +0.1 336,468 + Synpcc7942_0342 0.46 +0.6 336,498 + Synpcc7942_0342 0.59 +0.3 336,504 + Synpcc7942_0342 0.62 +0.6 336,506 - Synpcc7942_0342 0.63 +0.9 336,512 - Synpcc7942_0342 0.65 -1.9 336,544 - Synpcc7942_0342 0.79 +1.1 336,544 - Synpcc7942_0342 0.79 +0.5 336,563 - Synpcc7942_0342 0.88 -2.5 336,590 + -0.5 336,640 + +1.9 336,769 - psb27 Synpcc7942_0343 0.29 -2.5 336,774 + psb27 Synpcc7942_0343 0.30 -2.5 336,774 + psb27 Synpcc7942_0343 0.30 +0.3 336,814 - psb27 Synpcc7942_0343 0.40 -0.9 336,838 + psb27 Synpcc7942_0343 0.46 +1.4 336,933 + psb27 Synpcc7942_0343 0.69 -0.9 337,050 + +1.1 337,050 + +0.8 337,050 + -1.2 337,058 - +0.1 337,058 - +2.7 337,058 - +0.3 337,058 - +0.4 337,058 - -1.5 337,101 + -0.5 337,107 + -0.5 337,200 + +0.6 337,200 + +0.5 337,200 + +1.4 337,201 + -1.0 337,201 + +0.9 337,201 + +0.1 337,201 + -0.7 337,201 + +0.1 337,201 + +1.4 337,201 + +0.3 337,201 + +0.8 337,209 - +1.9 337,209 - +2.2 337,209 - +2.0 337,209 - +0.8 337,209 - +1.5 337,222 - -1.5 337,224 + -0.9 337,236 + -1.1 337,245 - -0.5 337,249 + +0.2 337,257 + +2.4 337,257 + +1.4 337,327 + +1.1 337,364 + -0.1 337,405 + -1.5 337,405 + -0.8 337,412 + +0.5 337,412 + -2.5 337,413 - +1.1 337,420 - -0.2 337,431 + +0.5 337,442 + +0.1 337,486 + +1.6 337,489 + -0.5 337,540 + Synpcc7942_0344 0.13 -0.3 337,563 - Synpcc7942_0344 0.15 -0.5 337,593 - Synpcc7942_0344 0.18 +0.1 337,707 + Synpcc7942_0344 0.29 -2.5 337,719 - Synpcc7942_0344 0.30 -1.5 337,814 + Synpcc7942_0344 0.39 -0.5 337,821 - Synpcc7942_0344 0.40 +0.3 337,821 - Synpcc7942_0344 0.40 +0.1 337,846 + Synpcc7942_0344 0.42 +0.3 337,854 - Synpcc7942_0344 0.43 +0.5 337,854 - Synpcc7942_0344 0.43 +0.1 337,870 + Synpcc7942_0344 0.44 +0.8 337,870 + Synpcc7942_0344 0.44 -1.5 337,880 + -1.5 337,951 - Synpcc7942_0344 0.52 +0.8 337,958 + Synpcc7942_0344 0.53 +1.1 337,966 - Synpcc7942_0344 0.53 -0.5 337,980 + Synpcc7942_0344 0.55 -0.5 338,009 + Synpcc7942_0344 0.58 -1.5 338,009 + Synpcc7942_0344 0.58 -1.0 338,017 - Synpcc7942_0344 0.58 +0.3 338,042 - Synpcc7942_0344 0.61 +0.1 338,046 - Synpcc7942_0344 0.61 -0.7 338,121 - Synpcc7942_0344 0.68 +0.9 338,220 + Synpcc7942_0344 0.78 -0.2 338,281 + Synpcc7942_0344 0.84 +1.4 338,320 - Synpcc7942_0344 0.87 -1.3 338,320 - Synpcc7942_0344 0.87 +1.8 338,331 - Synpcc7942_0344 0.88 -2.5 338,379 - +1.3 338,402 + +0.1 338,405 - +0.3 338,421 - -3.1 338,435 - +2.3 338,435 - +1.3 338,437 - +1.1 338,446 + +1.3 338,454 - -1.5 338,454 - -0.9 338,463 - +1.5 338,464 - -0.5 338,480 + -3.1 338,485 - -1.5 338,488 - -2.5 338,492 + -0.2 338,492 + +2.1 338,515 - +0.4 338,534 + +1.1 338,566 - +2.4 339,336 + +0.8 339,344 + +0.4 339,371 - +0.8
Or see this region's nucleotide sequence