Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01170

Experiment: PYE with sodium fluoride 7.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with sodium fluoride 7.5 mM
1,287,766	+				-0.8
1,287,790	+				+0.8
1,287,813	-				-1.3
1,287,830	+				-1.5
1,287,830	+				+0.7
1,287,837	+				-0.3
1,287,838	-				-0.2
1,287,838	-				+0.9
1,287,838	-				+0.3
1,287,877	+				-0.4
1,287,885	-				-0.2
1,287,885	-				-1.5
1,287,933	+				-0.2
1,287,947	-				+0.8
1,288,035	+		CCNA_01169	0.19	+0.2
1,288,057	+		CCNA_01169	0.22	-0.0
1,288,075	-		CCNA_01169	0.24	-1.7
1,288,089	-		CCNA_01169	0.26	-0.9
1,288,145	+		CCNA_01169	0.33	-1.3
1,288,148	-		CCNA_01169	0.33	-1.5
1,288,168	-		CCNA_01169	0.36	+0.1
1,288,190	+		CCNA_01169	0.38	+1.0
1,288,205	+		CCNA_01169	0.40	+1.3
1,288,237	-		CCNA_01169	0.44	+0.6
1,288,246	+				+0.8
1,288,307	+		CCNA_01169	0.53	-1.9
1,288,315	-		CCNA_01169	0.54	-2.1
1,288,327	-		CCNA_01169	0.55	-3.1
1,288,380	+		CCNA_01169	0.62	-0.5
1,288,380	+		CCNA_01169	0.62	-1.4
1,288,416	+		CCNA_01169	0.66	-1.1
1,288,416	+		CCNA_01169	0.66	-0.2
1,288,418	-		CCNA_01169	0.66	-0.4
1,288,522	+		CCNA_01169	0.79	+0.2
1,288,550	+		CCNA_01169	0.83	-1.2
1,288,550	+		CCNA_01169	0.83	-0.4
1,288,569	+		CCNA_01169	0.85	-0.8
1,288,569	+		CCNA_01169	0.85	+0.5
1,288,569	+		CCNA_01169	0.85	-0.6
1,288,620	+				+0.5
1,288,662	-				-0.4
1,288,669	+				+0.3
1,288,669	+				-1.2
1,288,679	+				-0.3
1,288,682	-				-0.6
1,288,716	+				-0.5
1,288,716	+				+0.8
1,288,716	+				-0.4
1,288,716	+				-0.3
1,288,801	-				-1.1
1,288,818	+				-1.0
1,288,818	+				-1.0
1,288,826	-				+0.2
1,288,826	-				-0.6
1,288,838	+				+0.0
1,288,839	+				-0.3
1,288,847	-				-0.6
1,288,847	-				+0.8
1,288,855	-				+1.5
1,288,871	-				-0.4
1,288,874	+				-0.2
1,288,894	+				-0.4
1,288,894	+				+0.6
1,288,894	+				-0.2
1,288,894	+				+0.3
1,288,894	+				+1.2
1,288,894	+				-1.0
1,288,894	+				-0.2
1,288,894	+				+1.2
1,288,894	+				-0.8
1,288,894	+				-1.2
1,288,894	+				-1.2
1,288,902	-				-0.5
1,288,902	-				+0.6
1,288,902	-				-0.7
1,288,902	-				-0.5
1,288,902	-				+1.5
1,288,902	-				-0.9
1,288,902	-				-1.2
1,288,909	+				+0.5
1,288,909	+				-2.9
1,288,933	+				-0.2
1,288,933	+				+0.2
1,288,941	-				-2.7
1,289,031	+		CCNA_01170	0.12	-1.1
1,289,036	+		CCNA_01170	0.12	-1.3
1,289,139	+		CCNA_01170	0.16	-0.5
1,289,139	+		CCNA_01170	0.16	-1.2
1,289,170	+		CCNA_01170	0.17	-0.4
1,289,170	+		CCNA_01170	0.17	-1.1
1,289,170	+		CCNA_01170	0.17	-0.7
1,289,178	-		CCNA_01170	0.18	-0.2
1,289,178	-		CCNA_01170	0.18	-1.6
1,289,178	-		CCNA_01170	0.18	+0.3
1,289,203	+		CCNA_01170	0.19	-0.0
1,289,211	-		CCNA_01170	0.19	+0.5
1,289,216	-		CCNA_01170	0.19	-2.5
1,289,216	-		CCNA_01170	0.19	-1.9
1,289,216	-		CCNA_01170	0.19	+0.2
1,289,232	+		CCNA_01170	0.20	-1.4
1,289,236	+		CCNA_01170	0.20	-1.7
1,289,275	+		CCNA_01170	0.21	-0.4
1,289,342	+		CCNA_01170	0.24	-1.0
1,289,342	+		CCNA_01170	0.24	-0.2
1,289,342	+		CCNA_01170	0.24	-2.4
1,289,350	-		CCNA_01170	0.24	-1.5
1,289,377	+		CCNA_01170	0.25	-0.6
1,289,492	+		CCNA_01170	0.30	-0.0
1,289,492	+		CCNA_01170	0.30	-1.3
1,289,492	+		CCNA_01170	0.30	-0.5
1,289,516	+		CCNA_01170	0.30	-1.5
1,289,553	+		CCNA_01170	0.32	-1.7
1,289,563	+		CCNA_01170	0.32	+0.2
1,289,609	-		CCNA_01170	0.34	-0.1
1,289,614	-		CCNA_01170	0.34	-0.3
1,289,629	+		CCNA_01170	0.35	-1.3
1,289,664	+		CCNA_01170	0.36	+0.5
1,289,672	-				+1.8
1,289,672	-		CCNA_01170	0.36	-1.0
1,289,729	+		CCNA_01170	0.39	+0.0
1,289,757	+		CCNA_01170	0.40	+0.3
1,289,760	-		CCNA_01170	0.40	-0.0
1,289,833	+		CCNA_01170	0.42	-0.9
1,289,841	-		CCNA_01170	0.43	+0.4
1,289,842	+		CCNA_01170	0.43	+0.8
1,289,853	+		CCNA_01170	0.43	-0.5
1,289,854	+		CCNA_01170	0.43	-1.8
1,289,895	-		CCNA_01170	0.45	-1.0
1,289,935	+		CCNA_01170	0.46	-0.2
1,289,975	-		CCNA_01170	0.48	+1.5
1,289,982	+		CCNA_01170	0.48	+0.3
1,290,012	-		CCNA_01170	0.49	+0.9
1,290,012	-		CCNA_01170	0.49	-1.3
1,290,019	+		CCNA_01170	0.49	+3.1
1,290,035	+		CCNA_01170	0.50	-1.0
1,290,038	-		CCNA_01170	0.50	-2.1
1,290,054	+		CCNA_01170	0.51	-0.5
1,290,054	+		CCNA_01170	0.51	-1.0
1,290,076	+		CCNA_01170	0.52	+1.0
1,290,078	+		CCNA_01170	0.52	+0.0
1,290,084	+		CCNA_01170	0.52	+1.5
1,290,085	+		CCNA_01170	0.52	+1.4
1,290,107	+		CCNA_01170	0.53	-0.1
1,290,109	+		CCNA_01170	0.53	-1.3
1,290,114	+		CCNA_01170	0.53	-2.2
1,290,115	-		CCNA_01170	0.53	-2.6
1,290,120	+		CCNA_01170	0.53	-1.1
1,290,128	-		CCNA_01170	0.54	-0.2
1,290,128	-		CCNA_01170	0.54	-0.1
1,290,176	+		CCNA_01170	0.55	-1.8
1,290,176	-		CCNA_01170	0.55	+0.6
1,290,180	-		CCNA_01170	0.56	-0.5
1,290,216	-		CCNA_01170	0.57	-0.9
1,290,240	+		CCNA_01170	0.58	-0.2
1,290,240	+		CCNA_01170	0.58	-1.8
1,290,248	-		CCNA_01170	0.58	-1.0
1,290,248	-		CCNA_01170	0.58	-0.5
1,290,263	-		CCNA_01170	0.59	+0.8
1,290,264	+		CCNA_01170	0.59	-1.8
1,290,287	+		CCNA_01170	0.60	-1.2
1,290,288	+		CCNA_01170	0.60	-1.7
1,290,330	+		CCNA_01170	0.61	-0.3
1,290,339	-		CCNA_01170	0.62	-0.4
1,290,450	+		CCNA_01170	0.66	-2.0
1,290,457	+		CCNA_01170	0.66	-1.0
1,290,490	-		CCNA_01170	0.67	-0.7
1,290,495	-		CCNA_01170	0.67	-0.7
1,290,509	-		CCNA_01170	0.68	-1.2
1,290,514	-		CCNA_01170	0.68	-0.3
1,290,524	+		CCNA_01170	0.69	-1.2
1,290,531	+		CCNA_01170	0.69	+0.4
1,290,532	-		CCNA_01170	0.69	-0.2
1,290,540	-		CCNA_01170	0.69	-1.8
1,290,550	+		CCNA_01170	0.70	-1.1
1,290,558	-		CCNA_01170	0.70	-1.1
1,290,610	+		CCNA_01170	0.72	-0.2
1,290,646	+		CCNA_01170	0.73	+0.0
1,290,704	-		CCNA_01170	0.75	-0.1
1,290,712	+		CCNA_01170	0.76	-0.8
1,290,725	-		CCNA_01170	0.76	-0.7
1,290,749	+		CCNA_01170	0.77	-0.4
1,290,766	+		CCNA_01170	0.78	-0.3
1,290,782	-		CCNA_01170	0.78	+1.2
1,290,865	+		CCNA_01170	0.81	+0.0
1,290,869	+		CCNA_01170	0.82	+0.3
1,290,875	+		CCNA_01170	0.82	-0.6
1,290,961	-		CCNA_01170	0.85	-0.8
1,290,975	+		CCNA_01170	0.86	-0.4
1,290,975	+		CCNA_01170	0.86	-1.0
1,290,975	+		CCNA_01170	0.86	-1.2
1,290,975	+		CCNA_01170	0.86	-1.0
1,290,975	+		CCNA_01170	0.86	-1.1
1,290,975	+		CCNA_01170	0.86	-0.7
1,290,983	-		CCNA_01170	0.86	-1.5
1,290,983	-		CCNA_01170	0.86	-2.3
1,290,983	-		CCNA_01170	0.86	+1.8
1,290,983	-		CCNA_01170	0.86	-0.2
1,290,983	-		CCNA_01170	0.86	-2.0
1,290,990	-		CCNA_01170	0.86	+0.5
1,291,033	-		CCNA_01170	0.88	+0.0
1,291,074	+		CCNA_01170	0.89	-1.4
1,291,082	-		CCNA_01170	0.90	-1.0
1,291,105	+				-2.1
1,291,108	-				+0.8
1,291,133	-				+1.3
1,291,171	-				+0.8
1,291,178	-				-0.0
1,291,180	+				-1.3
1,291,188	-				+0.9
1,291,241	+				-0.9
1,291,269	-				-1.5
1,291,271	+				-1.2
1,291,271	+				-0.2
1,291,279	-				-0.5
1,291,279	-				-0.8
1,291,303	+				-2.0
1,291,303	+				-1.3
1,291,305	-				+0.5
1,291,311	-				+0.0
1,291,350	+				+1.5
1,291,411	-				-0.5
1,291,411	-				-1.0
1,291,418	-				-1.3
1,291,420	+				-0.3
1,291,422	+				-0.3
1,291,424	+				-0.9
1,291,430	-				-0.5
1,291,486	-				-0.9
1,291,488	+				-0.7
1,291,496	-				+1.4
1,291,496	-				+1.4
1,291,496	-				+0.9
1,291,496	-				+0.6
1,291,801	-		CCNA_01171	0.14	-1.5
1,291,802	-		CCNA_01171	0.14	-1.5
1,291,811	-		CCNA_01171	0.17	-0.8
1,291,837	-		CCNA_01171	0.25	-1.3
1,291,936	+		CCNA_01171	0.54	-0.7
1,291,945	-		CCNA_01171	0.57	+0.7
1,291,963	+		CCNA_01171	0.62	-0.8
1,291,988	-		CCNA_01171	0.69	-2.4
1,291,990	+		CCNA_01171	0.70	+0.7
1,291,990	+		CCNA_01171	0.70	-0.9
1,291,990	+		CCNA_01171	0.70	+0.4
1,291,990	+		CCNA_01171	0.70	+0.7
1,291,998	-		CCNA_01171	0.72	-2.6
1,291,998	-		CCNA_01171	0.72	-0.7
1,292,020	+		CCNA_01171	0.79	-0.8
1,292,020	+		CCNA_01171	0.79	+0.2
1,292,020	+		CCNA_01171	0.79	-2.1
1,292,020	+		CCNA_01171	0.79	-0.9
1,292,020	+		CCNA_01171	0.79	-2.4
1,292,020	+		CCNA_01171	0.79	-1.6
1,292,020	+		CCNA_01171	0.79	+0.8
1,292,020	+		CCNA_01171	0.79	-0.3
1,292,020	+		CCNA_01171	0.79	-1.4
1,292,020	+		CCNA_01171	0.79	-0.2
1,292,020	+		CCNA_01171	0.79	+1.0
1,292,020	+		CCNA_01171	0.79	-0.8
1,292,020	+		CCNA_01171	0.79	+0.1
1,292,020	+		CCNA_01171	0.79	-0.5
1,292,028	-		CCNA_01171	0.81	-0.7
1,292,028	-		CCNA_01171	0.81	-0.4
1,292,028	-		CCNA_01171	0.81	-0.8
1,292,028	-		CCNA_01171	0.81	-1.4
1,292,028	-		CCNA_01171	0.81	-0.8
1,292,028	-		CCNA_01171	0.81	-0.2
1,292,028	-		CCNA_01171	0.81	+1.2
1,292,035	+		CCNA_01171	0.83	-1.2
1,292,057	+		CCNA_01171	0.90	+0.8
1,292,128	-				+0.7
1,292,128	-				+0.4
1,292,142	+				-0.5
1,292,142	+				+0.4
1,292,150	-				-1.7
1,292,150	-				-0.7
1,292,194	+				-0.2
1,292,194	+				-0.1
1,292,207	-				-2.9
1,292,207	-				-0.8
1,292,212	+				+0.6
1,292,212	+				+0.5
1,292,212	+				-1.7
1,292,212	+				+0.8
1,292,212	+				-1.8
1,292,217	+				-0.9
1,292,220	-				-0.3
1,292,285	+				+0.8
1,292,314	+		CCNA_01172	0.13	-0.4