Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15045

Experiment: soil sample 2; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	soil sample 2; outgrowth in LB
3,172,088	+		ABZR87_RS15040	0.38	-0.9
3,172,089	-		ABZR87_RS15040	0.38	+0.9
3,172,089	-		ABZR87_RS15040	0.38	+0.8
3,172,124	+		ABZR87_RS15040	0.40	-0.0
3,172,124	+		ABZR87_RS15040	0.40	-0.7
3,172,125	-		ABZR87_RS15040	0.41	-0.4
3,172,253	+		ABZR87_RS15040	0.49	-0.3
3,172,253	+		ABZR87_RS15040	0.49	-0.2
3,172,253	+		ABZR87_RS15040	0.49	-1.1
3,172,253	+		ABZR87_RS15040	0.49	-0.4
3,172,253	+		ABZR87_RS15040	0.49	-0.9
3,172,253	+		ABZR87_RS15040	0.49	-0.4
3,172,254	-		ABZR87_RS15040	0.49	-0.4
3,172,254	-		ABZR87_RS15040	0.49	-0.2
3,172,277	+		ABZR87_RS15040	0.50	+0.4
3,172,277	+		ABZR87_RS15040	0.50	-0.1
3,172,277	+		ABZR87_RS15040	0.50	+0.5
3,172,277	+		ABZR87_RS15040	0.50	-0.2
3,172,277	+		ABZR87_RS15040	0.50	-0.2
3,172,278	-		ABZR87_RS15040	0.51	+0.0
3,172,278	-		ABZR87_RS15040	0.51	+0.1
3,172,278	-		ABZR87_RS15040	0.51	-1.7
3,172,362	-		ABZR87_RS15040	0.56	-0.1
3,172,548	-		ABZR87_RS15040	0.68	+0.1
3,172,548	-		ABZR87_RS15040	0.68	-0.6
3,172,557	-		ABZR87_RS15040	0.69	+2.1
3,172,642	+		ABZR87_RS15040	0.74	-0.1
3,172,642	+		ABZR87_RS15040	0.74	-0.3
3,172,642	+		ABZR87_RS15040	0.74	+0.0
3,172,643	-		ABZR87_RS15040	0.74	-1.2
3,172,643	-		ABZR87_RS15040	0.74	-0.9
3,172,643	-		ABZR87_RS15040	0.74	-2.4
3,172,643	-		ABZR87_RS15040	0.74	-0.3
3,172,643	-		ABZR87_RS15040	0.74	-1.2
3,172,646	+		ABZR87_RS15040	0.75	-0.4
3,172,646	+		ABZR87_RS15040	0.75	+0.3
3,172,646	+		ABZR87_RS15040	0.75	-1.8
3,172,646	+		ABZR87_RS15040	0.75	-0.6
3,172,646	+		ABZR87_RS15040	0.75	+0.3
3,172,646	+		ABZR87_RS15040	0.75	-0.5
3,172,647	-		ABZR87_RS15040	0.75	-1.3
3,172,647	-		ABZR87_RS15040	0.75	-0.5
3,172,647	-		ABZR87_RS15040	0.75	+0.5
3,172,647	-		ABZR87_RS15040	0.75	-1.0
3,172,647	-		ABZR87_RS15040	0.75	-1.0
3,172,647	-		ABZR87_RS15040	0.75	+2.1
3,172,647	-		ABZR87_RS15040	0.75	+0.1
3,172,647	-		ABZR87_RS15040	0.75	-0.4
3,172,758	-		ABZR87_RS15040	0.82	-0.8
3,172,871	+		ABZR87_RS15040	0.89	+1.0
3,172,871	+		ABZR87_RS15040	0.89	-0.1
3,172,871	+		ABZR87_RS15040	0.89	-0.0
3,172,872	-		ABZR87_RS15040	0.89	+0.0
3,172,907	+				-0.4
3,172,907	+				+0.0
3,172,907	+				-2.8
3,172,907	+				+2.7
3,172,907	+				+0.9
3,172,907	+				-0.4
3,172,907	+				+2.6
3,172,907	+				-2.0
3,172,907	+				-1.1
3,172,908	-				-0.0
3,172,908	-				+0.4
3,172,908	-				-0.5
3,172,908	-				-0.4
3,172,917	+				+0.1
3,172,938	-				+0.1
3,173,014	+				-0.0
3,173,030	+				+0.1
3,173,030	+				-0.3
3,173,031	-				+0.3
3,173,079	-				-0.2
3,173,172	+				-2.5
3,173,173	-				+0.2
3,173,173	-				-0.8
3,173,173	-				-0.4
3,173,299	+		ABZR87_RS15045	0.11	-0.5
3,173,299	+		ABZR87_RS15045	0.11	-1.2
3,173,300	-		ABZR87_RS15045	0.11	-0.7
3,173,466	+		ABZR87_RS15045	0.18	-0.2
3,173,629	-		ABZR87_RS15045	0.25	-0.4
3,173,649	+		ABZR87_RS15045	0.26	+1.8
3,173,934	+		ABZR87_RS15045	0.38	+0.0
3,173,934	+		ABZR87_RS15045	0.38	-1.6
3,173,935	-		ABZR87_RS15045	0.38	-0.9
3,173,946	+		ABZR87_RS15045	0.38	+0.6
3,173,947	-		ABZR87_RS15045	0.38	-0.3
3,174,063	+		ABZR87_RS15045	0.43	-1.8
3,174,063	+		ABZR87_RS15045	0.43	-0.4
3,174,063	+		ABZR87_RS15045	0.43	+0.4
3,174,171	+		ABZR87_RS15045	0.48	-0.4
3,174,171	+		ABZR87_RS15045	0.48	+0.6
3,174,171	+		ABZR87_RS15045	0.48	-0.0
3,174,172	-		ABZR87_RS15045	0.48	-1.5
3,174,172	-		ABZR87_RS15045	0.48	-1.3
3,174,172	-		ABZR87_RS15045	0.48	-2.2
3,174,172	-		ABZR87_RS15045	0.48	-1.3
3,174,333	+		ABZR87_RS15045	0.55	-1.1
3,174,475	-		ABZR87_RS15045	0.61	-0.3
3,174,822	+		ABZR87_RS15045	0.75	+0.7
3,174,822	+		ABZR87_RS15045	0.75	-0.6
3,174,822	+		ABZR87_RS15045	0.75	-1.4
3,174,822	+		ABZR87_RS15045	0.75	+0.1
3,174,823	-		ABZR87_RS15045	0.75	-1.4
3,174,823	-		ABZR87_RS15045	0.75	+0.3
3,174,858	+		ABZR87_RS15045	0.77	-0.6
3,174,858	+		ABZR87_RS15045	0.77	-0.6
3,174,858	+		ABZR87_RS15045	0.77	+1.0
3,174,859	-		ABZR87_RS15045	0.77	-0.2
3,174,859	-		ABZR87_RS15045	0.77	-0.2
3,174,859	-		ABZR87_RS15045	0.77	-0.3
3,174,859	-		ABZR87_RS15045	0.77	-0.9
3,174,912	+		ABZR87_RS15045	0.79	-1.4
3,174,912	+		ABZR87_RS15045	0.79	+0.8
3,174,913	-		ABZR87_RS15045	0.79	-0.2
3,174,913	-		ABZR87_RS15045	0.79	-0.5
3,174,916	-		ABZR87_RS15045	0.79	+1.4
3,174,918	+		ABZR87_RS15045	0.79	-2.1
3,174,918	+		ABZR87_RS15045	0.79	-0.5
3,174,918	+		ABZR87_RS15045	0.79	-0.9
3,174,918	+		ABZR87_RS15045	0.79	-1.7
3,174,918	+		ABZR87_RS15045	0.79	-0.8
3,174,918	+		ABZR87_RS15045	0.79	+1.3
3,174,918	+		ABZR87_RS15045	0.79	-0.2
3,174,919	-		ABZR87_RS15045	0.80	+0.6
3,174,919	-		ABZR87_RS15045	0.80	+0.8
3,174,919	-		ABZR87_RS15045	0.80	-0.0
3,174,919	-		ABZR87_RS15045	0.80	-0.6
3,174,919	-		ABZR87_RS15045	0.80	-0.5
3,174,919	-		ABZR87_RS15045	0.80	-0.9
3,174,956	+		ABZR87_RS15045	0.81	-0.7
3,175,140	+		ABZR87_RS15045	0.89	+0.4
3,175,140	+		ABZR87_RS15045	0.89	-0.6
3,175,140	+		ABZR87_RS15045	0.89	+0.8
3,175,140	+		ABZR87_RS15045	0.89	-0.4
3,175,141	-		ABZR87_RS15045	0.89	-1.0
3,175,141	-		ABZR87_RS15045	0.89	+1.1
3,175,570	+		ABZR87_RS15050	0.15	+0.6
3,175,571	-		ABZR87_RS15050	0.15	+0.5
3,175,677	+		ABZR87_RS15050	0.25	-2.2
3,175,677	+		ABZR87_RS15050	0.25	+0.0
3,176,119	+		ABZR87_RS15050	0.68	-0.3
3,176,119	+		ABZR87_RS15050	0.68	+0.6
3,176,119	+		ABZR87_RS15050	0.68	+1.2
3,176,120	-		ABZR87_RS15050	0.68	-0.1
3,176,120	-		ABZR87_RS15050	0.68	-0.5
3,176,120	-		ABZR87_RS15050	0.68	-0.7
3,176,120	-		ABZR87_RS15050	0.68	-0.8
3,176,120	-		ABZR87_RS15050	0.68	-0.3
3,176,120	-		ABZR87_RS15050	0.68	+0.4
3,176,120	-		ABZR87_RS15050	0.68	-0.2
3,176,120	-		ABZR87_RS15050	0.68	-0.0
3,176,197	+		ABZR87_RS15050	0.75	-0.4
3,176,198	-		ABZR87_RS15050	0.75	+0.4
3,176,198	-		ABZR87_RS15050	0.75	-0.5
3,176,198	-		ABZR87_RS15050	0.75	-0.3
3,176,271	+		ABZR87_RS15050	0.83	+0.1
3,176,271	+		ABZR87_RS15050	0.83	-0.8