Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06860

Experiment: soil sample 2; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	soil sample 2; outgrowth in LB
1,451,149	+		ABZR87_RS06855	0.56	+0.1
1,451,294	-		ABZR87_RS06855	0.72	+0.3
1,451,337	+		ABZR87_RS06855	0.76	-0.2
1,451,439	-		ABZR87_RS06855	0.87	+0.1
1,451,441	-		ABZR87_RS06855	0.88	-3.4
1,451,441	-		ABZR87_RS06855	0.88	-0.2
1,451,441	-		ABZR87_RS06855	0.88	+0.1
1,451,441	-		ABZR87_RS06855	0.88	+1.1
1,451,441	-		ABZR87_RS06855	0.88	-0.2
1,451,600	+				+0.0
1,451,601	-				-0.6
1,451,623	+				+0.6
1,451,623	+				+0.5
1,451,623	+				-1.2
1,451,623	+				+0.4
1,451,624	-				+0.4
1,451,624	-				+0.6
1,451,624	-				+0.5
1,451,626	+				+0.2
1,451,626	+				+0.1
1,451,626	+				+0.0
1,451,626	+				+0.6
1,451,627	-				-0.4
1,451,648	+				+0.4
1,451,680	-				-0.6
1,451,704	+				-0.1
1,451,704	+				-0.5
1,451,704	+				+0.4
1,451,705	-				-0.7
1,451,706	+				+0.0
1,451,706	+				+0.1
1,451,706	+				+0.9
1,451,707	-				+1.4
1,451,725	+				+0.2
1,451,725	+				-0.7
1,451,726	-				+0.6
1,451,726	-				-1.3
1,451,726	-				+0.8
1,451,726	-				-0.5
1,451,726	-				+0.6
1,451,770	-				-1.0
1,451,770	-				+0.2
1,451,792	+				-0.0
1,451,793	-				-0.3
1,451,793	-				-0.1
1,451,815	+				+0.2
1,451,816	-				+1.2
1,451,816	-				+0.1
1,451,816	-				-0.2
1,452,017	+				+0.5
1,452,019	-				+0.4
1,452,092	+		ABZR87_RS06860	0.12	-0.6
1,452,092	+		ABZR87_RS06860	0.12	+0.2
1,452,092	+		ABZR87_RS06860	0.12	+0.6
1,452,092	+		ABZR87_RS06860	0.12	-0.9
1,452,092	+		ABZR87_RS06860	0.12	+1.1
1,452,093	-		ABZR87_RS06860	0.12	+1.7
1,452,093	-		ABZR87_RS06860	0.12	+0.8
1,452,093	-		ABZR87_RS06860	0.12	-0.0
1,452,093	-		ABZR87_RS06860	0.12	+0.6
1,452,131	+		ABZR87_RS06860	0.13	+0.6
1,452,131	+		ABZR87_RS06860	0.13	-0.4
1,452,131	+		ABZR87_RS06860	0.13	+0.3
1,452,132	-		ABZR87_RS06860	0.13	+0.4
1,452,132	-		ABZR87_RS06860	0.13	+1.8
1,452,194	+		ABZR87_RS06860	0.15	+0.7
1,452,194	+		ABZR87_RS06860	0.15	+0.9
1,452,299	+		ABZR87_RS06860	0.19	+0.6
1,452,299	+		ABZR87_RS06860	0.19	+0.5
1,452,299	+		ABZR87_RS06860	0.19	+0.5
1,452,299	+		ABZR87_RS06860	0.19	+0.1
1,452,299	+		ABZR87_RS06860	0.19	+0.7
1,452,300	-		ABZR87_RS06860	0.19	-0.0
1,452,300	-		ABZR87_RS06860	0.19	-0.4
1,452,300	-		ABZR87_RS06860	0.19	+0.8
1,452,300	-		ABZR87_RS06860	0.19	+0.9
1,452,300	-		ABZR87_RS06860	0.19	+0.8
1,452,300	-		ABZR87_RS06860	0.19	-0.1
1,452,300	-		ABZR87_RS06860	0.19	+0.9
1,452,458	+		ABZR87_RS06860	0.24	-0.0
1,452,458	+		ABZR87_RS06860	0.24	-0.1
1,452,458	+		ABZR87_RS06860	0.24	-0.5
1,452,458	+		ABZR87_RS06860	0.24	+0.4
1,452,458	+		ABZR87_RS06860	0.24	+0.3
1,452,476	+		ABZR87_RS06860	0.25	+0.9
1,452,476	+		ABZR87_RS06860	0.25	+0.7
1,452,476	+		ABZR87_RS06860	0.25	-1.0
1,452,476	+		ABZR87_RS06860	0.25	+0.2
1,452,476	+		ABZR87_RS06860	0.25	+0.4
1,452,476	+		ABZR87_RS06860	0.25	+1.0
1,452,477	-		ABZR87_RS06860	0.25	-0.5
1,452,477	-		ABZR87_RS06860	0.25	-0.2
1,452,477	-		ABZR87_RS06860	0.25	+0.2
1,452,477	-		ABZR87_RS06860	0.25	+0.2
1,452,477	-		ABZR87_RS06860	0.25	-0.9
1,452,704	+		ABZR87_RS06860	0.33	+0.7
1,452,705	-		ABZR87_RS06860	0.33	+1.0
1,452,731	+		ABZR87_RS06860	0.33	+1.4
1,452,732	-		ABZR87_RS06860	0.33	+1.0
1,452,743	+		ABZR87_RS06860	0.34	-0.1
1,452,743	+		ABZR87_RS06860	0.34	+0.5
1,452,743	+		ABZR87_RS06860	0.34	-0.2
1,452,743	+		ABZR87_RS06860	0.34	-0.7
1,452,744	-		ABZR87_RS06860	0.34	+0.8
1,452,744	-		ABZR87_RS06860	0.34	-0.4
1,452,758	+		ABZR87_RS06860	0.34	+0.3
1,452,759	-		ABZR87_RS06860	0.34	+0.7
1,452,830	+		ABZR87_RS06860	0.37	+0.1
1,452,830	+		ABZR87_RS06860	0.37	+0.6
1,452,831	-		ABZR87_RS06860	0.37	+0.7
1,452,831	-		ABZR87_RS06860	0.37	-0.4
1,452,831	-		ABZR87_RS06860	0.37	-0.8
1,452,848	+		ABZR87_RS06860	0.37	+0.7
1,452,848	+		ABZR87_RS06860	0.37	-0.2
1,452,848	+		ABZR87_RS06860	0.37	+0.6
1,452,863	+		ABZR87_RS06860	0.38	+0.4
1,452,863	+		ABZR87_RS06860	0.38	-0.1
1,452,863	+		ABZR87_RS06860	0.38	+0.3
1,452,863	+		ABZR87_RS06860	0.38	+0.3
1,452,863	+		ABZR87_RS06860	0.38	-0.4
1,452,863	+		ABZR87_RS06860	0.38	-0.3
1,452,863	+		ABZR87_RS06860	0.38	-0.7
1,452,864	-		ABZR87_RS06860	0.38	+0.7
1,452,864	-		ABZR87_RS06860	0.38	+1.0
1,452,864	-		ABZR87_RS06860	0.38	+0.1
1,452,864	-		ABZR87_RS06860	0.38	+0.5
1,452,864	-		ABZR87_RS06860	0.38	+0.0
1,452,864	-		ABZR87_RS06860	0.38	+0.1
1,452,864	-		ABZR87_RS06860	0.38	+1.0
1,452,864	-		ABZR87_RS06860	0.38	-0.7
1,452,864	-		ABZR87_RS06860	0.38	-0.0
1,452,864	-		ABZR87_RS06860	0.38	+0.1
1,452,864	-		ABZR87_RS06860	0.38	+0.2
1,452,864	-		ABZR87_RS06860	0.38	-0.2
1,452,864	-		ABZR87_RS06860	0.38	+0.4
1,452,864	-		ABZR87_RS06860	0.38	-0.5
1,452,864	-		ABZR87_RS06860	0.38	+0.3
1,452,928	-		ABZR87_RS06860	0.40	+0.1
1,452,965	+		ABZR87_RS06860	0.41	-0.4
1,452,965	+		ABZR87_RS06860	0.41	+0.3
1,452,965	+		ABZR87_RS06860	0.41	+0.4
1,452,965	+		ABZR87_RS06860	0.41	-0.1
1,452,965	+		ABZR87_RS06860	0.41	+0.2
1,452,965	+		ABZR87_RS06860	0.41	-0.5
1,452,965	+		ABZR87_RS06860	0.41	-0.3
1,452,965	+		ABZR87_RS06860	0.41	-0.9
1,452,966	-		ABZR87_RS06860	0.41	+0.9
1,452,966	-		ABZR87_RS06860	0.41	+0.1
1,453,196	+		ABZR87_RS06860	0.49	+0.4
1,453,196	+		ABZR87_RS06860	0.49	-0.6
1,453,196	+		ABZR87_RS06860	0.49	+0.1
1,453,196	+		ABZR87_RS06860	0.49	-0.1
1,453,196	+		ABZR87_RS06860	0.49	+0.4
1,453,197	-		ABZR87_RS06860	0.49	+0.4
1,453,197	-		ABZR87_RS06860	0.49	+0.8
1,453,256	+		ABZR87_RS06860	0.51	+0.0
1,453,256	+		ABZR87_RS06860	0.51	+1.3
1,453,257	-		ABZR87_RS06860	0.51	-0.1
1,453,257	-		ABZR87_RS06860	0.51	+0.4
1,453,257	-		ABZR87_RS06860	0.51	+0.2
1,453,301	+		ABZR87_RS06860	0.53	+0.1
1,453,379	+		ABZR87_RS06860	0.56	+0.3
1,453,379	+		ABZR87_RS06860	0.56	-0.1
1,453,379	+		ABZR87_RS06860	0.56	+0.3
1,453,379	+		ABZR87_RS06860	0.56	+0.7
1,453,379	+		ABZR87_RS06860	0.56	+0.9
1,453,379	+		ABZR87_RS06860	0.56	-0.6
1,453,379	+		ABZR87_RS06860	0.56	+0.8
1,453,379	+		ABZR87_RS06860	0.56	-0.9
1,453,379	+		ABZR87_RS06860	0.56	+0.9
1,453,379	+		ABZR87_RS06860	0.56	-0.4
1,453,380	-		ABZR87_RS06860	0.56	+1.6
1,453,380	-		ABZR87_RS06860	0.56	+1.2
1,453,380	-		ABZR87_RS06860	0.56	+0.1
1,453,380	-		ABZR87_RS06860	0.56	+0.6
1,453,380	-		ABZR87_RS06860	0.56	+1.3
1,453,380	-		ABZR87_RS06860	0.56	-0.3
1,453,478	+		ABZR87_RS06860	0.59	-0.8
1,453,479	-		ABZR87_RS06860	0.59	+0.4
1,453,479	-		ABZR87_RS06860	0.59	-0.2
1,453,580	-		ABZR87_RS06860	0.63	+0.4
1,453,644	+		ABZR87_RS06860	0.65	+0.6
1,453,689	+		ABZR87_RS06860	0.66	+0.1
1,453,689	+		ABZR87_RS06860	0.66	+1.6
1,453,690	-		ABZR87_RS06860	0.66	-0.3
1,453,703	+		ABZR87_RS06860	0.67	-0.5
1,453,704	-		ABZR87_RS06860	0.67	+0.3
1,453,704	-		ABZR87_RS06860	0.67	+0.7
1,453,704	-		ABZR87_RS06860	0.67	+1.3
1,453,709	+		ABZR87_RS06860	0.67	-1.1
1,453,709	+		ABZR87_RS06860	0.67	-0.6
1,453,709	+		ABZR87_RS06860	0.67	+0.7
1,453,709	+		ABZR87_RS06860	0.67	+0.6
1,453,709	+		ABZR87_RS06860	0.67	+1.0
1,453,710	-		ABZR87_RS06860	0.67	-0.1
1,453,710	-		ABZR87_RS06860	0.67	-0.0
1,453,710	-		ABZR87_RS06860	0.67	+0.0
1,453,710	-		ABZR87_RS06860	0.67	+1.3
1,453,710	-		ABZR87_RS06860	0.67	-0.1
1,453,725	-		ABZR87_RS06860	0.67	+1.1
1,453,865	+		ABZR87_RS06860	0.72	+0.5
1,453,866	-		ABZR87_RS06860	0.72	+0.5
1,454,126	+		ABZR87_RS06860	0.81	-0.2
1,454,132	+		ABZR87_RS06860	0.81	-0.6
1,454,132	+		ABZR87_RS06860	0.81	-0.3
1,454,133	-		ABZR87_RS06860	0.81	+0.4
1,454,133	-		ABZR87_RS06860	0.81	-0.5
1,454,341	+		ABZR87_RS06860	0.89	-0.2
1,454,679	+				+0.6
1,454,679	+				+0.3
1,454,679	+				+1.7
1,454,679	+				+1.0
1,454,679	+				+0.3
1,454,679	+				+1.8
1,454,679	+				+0.6
1,454,679	+				-0.2
1,454,680	-				-0.7
1,454,680	-				-0.0
1,454,680	-				+1.0
1,454,680	-				+0.8
1,454,680	-				+0.7
1,454,687	-				+0.8
1,454,717	+				-0.0
1,454,763	+				-0.8
1,454,763	+				-0.2
1,454,764	-				-0.1
1,454,764	-				-0.3
1,454,764	-				+0.3
1,454,764	-				-0.0
1,454,873	+				-0.2
1,454,873	+				-1.1
1,454,873	+				-0.5
1,454,873	+				-1.1
1,454,874	-				-2.4
1,454,874	-				-0.5
1,454,986	+		ABZR87_RS06865	0.18	+0.7
1,454,986	+		ABZR87_RS06865	0.18	+0.1
1,454,986	+		ABZR87_RS06865	0.18	+0.1
1,454,986	+		ABZR87_RS06865	0.18	+0.4
1,454,987	-		ABZR87_RS06865	0.18	+0.4
1,454,987	-		ABZR87_RS06865	0.18	-0.1
1,454,987	-		ABZR87_RS06865	0.18	+0.3
1,454,987	-		ABZR87_RS06865	0.18	+0.3
1,454,988	+		ABZR87_RS06865	0.18	+0.5
1,455,041	-		ABZR87_RS06865	0.31	-0.0
1,455,089	-		ABZR87_RS06865	0.43	-1.4
1,455,089	-		ABZR87_RS06865	0.43	+0.5
1,455,089	-		ABZR87_RS06865	0.43	+0.2
1,455,089	-		ABZR87_RS06865	0.43	+1.3
1,455,106	+		ABZR87_RS06865	0.47	-0.6
1,455,106	+		ABZR87_RS06865	0.47	-1.1
1,455,169	+		ABZR87_RS06865	0.63	-0.3
1,455,169	+		ABZR87_RS06865	0.63	-0.1
1,455,170	-		ABZR87_RS06865	0.63	-0.2
1,455,530	+		ABZR87_RS06870	0.23	+0.4
1,455,531	-		ABZR87_RS06870	0.23	-0.8
1,455,531	-		ABZR87_RS06870	0.23	+0.2
1,455,531	-		ABZR87_RS06870	0.23	+0.1
1,455,531	-		ABZR87_RS06870	0.23	-0.4