Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1529

Experiment: Valeric 25 mM; anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Valeric 25 mM; anaerobic
1,799,493	+				-1.7
1,799,494	-				+0.6
1,799,494	-				+0.5
1,799,511	-				-1.1
1,799,528	-				-0.6
1,799,586	-				-3.9
1,799,586	-				+0.0
1,799,586	-				-4.3
1,799,587	+				-1.5
1,799,587	+				+0.2
1,799,587	+				-0.7
1,799,587	+				+0.6
1,799,588	-				-5.0
1,799,588	-				-2.7
1,799,588	-				-2.4
1,799,588	-				-2.4
1,799,588	-				-2.6
1,799,588	-				-1.6
1,799,593	+				+0.5
1,799,593	+				-0.6
1,799,593	+				-0.2
1,799,593	+				+0.5
1,799,594	-				-4.1
1,799,594	-				-3.5
1,799,594	-				-2.7
1,799,594	-				-2.1
1,799,599	+				-0.1
1,799,599	+				-4.5
1,799,599	+				+0.4
1,799,599	+				-0.5
1,799,600	-				+1.6
1,799,600	-				-2.0
1,799,600	-				-2.2
1,799,600	-				-3.1
1,799,600	-				-2.6
1,799,600	-				-1.2
1,799,600	-				-2.2
1,799,601	+				-0.2
1,799,602	-				-4.7
1,799,602	-				-3.3
1,799,603	+				+0.9
1,799,603	+				-0.2
1,799,603	+				-0.1
1,799,603	+				-0.2
1,799,603	+				+0.0
1,799,604	-				-2.3
1,799,609	+				-2.8
1,799,609	+				+0.1
1,799,609	+				+0.1
1,799,610	-				-2.0
1,799,610	-				-2.8
1,799,610	-				-2.5
1,799,610	-				-3.4
1,799,610	-				-3.5
1,799,685	+				-0.3
1,799,685	+				+0.5
1,799,685	+				+1.1
1,799,685	+				+0.8
1,799,686	-				-2.1
1,799,686	-				-3.0
1,799,686	-				-3.8
1,799,686	-				-3.0
1,799,873	+		Rru_A1529	0.20	-0.2
1,799,873	+		Rru_A1529	0.20	-0.2
1,799,873	+		Rru_A1529	0.20	+0.7
1,799,873	+		Rru_A1529	0.20	+0.0
1,799,873	+		Rru_A1529	0.20	+0.3
1,799,874	-		Rru_A1529	0.20	-3.1
1,799,874	-		Rru_A1529	0.20	-2.1
1,799,874	-		Rru_A1529	0.20	-5.2
1,799,874	-		Rru_A1529	0.20	-3.6
1,800,014	+		Rru_A1529	0.34	-0.1
1,800,015	-		Rru_A1529	0.34	-3.1
1,800,098	+		Rru_A1529	0.42	-0.1
1,800,098	+		Rru_A1529	0.42	+1.0
1,800,099	-		Rru_A1529	0.42	-4.7
1,800,287	+		Rru_A1529	0.61	-0.7
1,800,287	+		Rru_A1529	0.61	-0.3
1,800,287	+		Rru_A1529	0.61	+1.7
1,800,287	+		Rru_A1529	0.61	+0.3
1,800,287	+		Rru_A1529	0.61	-0.6
1,800,287	+		Rru_A1529	0.61	+0.3
1,800,287	+		Rru_A1529	0.61	-0.2
1,800,287	+		Rru_A1529	0.61	+1.0
1,800,287	+		Rru_A1529	0.61	+0.1
1,800,287	+		Rru_A1529	0.61	-0.5
1,800,287	+		Rru_A1529	0.61	+0.2
1,800,287	+		Rru_A1529	0.61	-0.3
1,800,288	-		Rru_A1529	0.61	-2.3
1,800,288	-		Rru_A1529	0.61	-2.0
1,800,288	-		Rru_A1529	0.61	-2.2
1,800,288	-		Rru_A1529	0.61	-0.1
1,800,288	-		Rru_A1529	0.61	-3.0
1,800,288	-		Rru_A1529	0.61	-4.3
1,800,288	-		Rru_A1529	0.61	-3.1
1,800,288	-		Rru_A1529	0.61	+0.3
1,800,288	-		Rru_A1529	0.61	-2.8
1,800,288	-		Rru_A1529	0.61	-2.5
1,800,288	-		Rru_A1529	0.61	-3.3
1,800,288	-		Rru_A1529	0.61	-3.2
1,800,288	-		Rru_A1529	0.61	-3.7
1,800,288	-		Rru_A1529	0.61	-0.5
1,800,288	-		Rru_A1529	0.61	-2.2
1,800,463	+		Rru_A1529	0.78	-0.3
1,800,463	+		Rru_A1529	0.78	-0.3
1,800,463	+		Rru_A1529	0.78	-2.2
1,800,463	+		Rru_A1529	0.78	+0.7
1,800,463	+		Rru_A1529	0.78	+0.0
1,800,464	-		Rru_A1529	0.78	-1.2
1,800,464	-		Rru_A1529	0.78	-3.4
1,800,464	-		Rru_A1529	0.78	-3.3
1,800,464	-		Rru_A1529	0.78	-2.2
1,800,464	-		Rru_A1529	0.78	-2.4
1,800,464	-		Rru_A1529	0.78	-0.7
1,800,464	-		Rru_A1529	0.78	-3.3
1,800,844	+		Rru_A1530	0.17	-2.7
1,800,844	+		Rru_A1530	0.17	-3.2
1,800,844	+		Rru_A1530	0.17	-2.9
1,800,844	+		Rru_A1530	0.17	-3.4
1,800,844	+		Rru_A1530	0.17	-1.1
1,800,844	+		Rru_A1530	0.17	-3.6
1,800,844	+		Rru_A1530	0.17	-2.3
1,800,845	-		Rru_A1530	0.17	-3.5
1,800,845	-		Rru_A1530	0.17	-4.7
1,800,845	-		Rru_A1530	0.17	-3.1
1,800,982	+		Rru_A1530	0.31	-1.2
1,800,982	+		Rru_A1530	0.31	-3.2
1,800,982	+		Rru_A1530	0.31	-0.5
1,801,048	+		Rru_A1530	0.38	-3.2
1,801,048	+		Rru_A1530	0.38	-3.2
1,801,048	+		Rru_A1530	0.38	-1.9
1,801,048	+		Rru_A1530	0.38	-3.7
1,801,048	+		Rru_A1530	0.38	-2.2
1,801,049	-		Rru_A1530	0.38	-3.9
1,801,049	-		Rru_A1530	0.38	-3.9
1,801,049	-		Rru_A1530	0.38	-4.2
1,801,049	-		Rru_A1530	0.38	-2.1
1,801,049	-		Rru_A1530	0.38	-4.1
1,801,049	-		Rru_A1530	0.38	-1.9
1,801,049	-		Rru_A1530	0.38	-0.7
1,801,049	-		Rru_A1530	0.38	-2.5
1,801,049	-		Rru_A1530	0.38	-3.8
1,801,075	+		Rru_A1530	0.41	-3.8
1,801,075	+		Rru_A1530	0.41	-3.0
1,801,075	+		Rru_A1530	0.41	-2.4
1,801,076	-		Rru_A1530	0.41	-3.5
1,801,076	-		Rru_A1530	0.41	-2.9
1,801,076	-		Rru_A1530	0.41	-2.6
1,801,125	+		Rru_A1530	0.46	-2.0
1,801,126	-		Rru_A1530	0.46	-3.1
1,801,126	-		Rru_A1530	0.46	-3.5
1,801,186	-		Rru_A1530	0.53	-1.8
1,801,186	-		Rru_A1530	0.53	-2.4
1,801,186	-		Rru_A1530	0.53	-1.0
1,801,234	+		Rru_A1530	0.57	-4.8
1,801,235	-		Rru_A1530	0.58	-3.8
1,801,235	-		Rru_A1530	0.58	-4.0
1,801,235	-		Rru_A1530	0.58	-4.7
1,801,235	-		Rru_A1530	0.58	-3.0
1,801,255	+		Rru_A1530	0.60	-2.4
1,801,256	-		Rru_A1530	0.60	-3.7
1,801,507	+		Rru_A1530	0.86	-4.2
1,801,507	+		Rru_A1530	0.86	-3.2
1,801,507	+		Rru_A1530	0.86	-3.3
1,801,507	+		Rru_A1530	0.86	-4.4
1,801,507	+		Rru_A1530	0.86	-1.8
1,801,507	+		Rru_A1530	0.86	-4.7
1,801,507	+		Rru_A1530	0.86	-2.3
1,801,508	-		Rru_A1530	0.86	-4.6
1,801,508	-		Rru_A1530	0.86	-2.3
1,801,508	-		Rru_A1530	0.86	-3.6
1,801,508	-		Rru_A1530	0.86	-3.0
1,801,508	-		Rru_A1530	0.86	-1.3
1,801,509	+		Rru_A1530	0.86	-5.3
1,801,637	+				-1.6
1,801,637	+				-2.1
1,801,637	+				-2.2
1,801,638	-				-1.2
1,801,638	-				-2.6
1,801,638	-				-1.1
1,801,638	-				-2.9
1,801,638	-				-3.6
1,801,638	-				-2.5
1,801,638	-				-2.2
1,801,638	-				+0.1
1,801,638	-				-4.0
1,801,638	-				-4.8