Experiment: Thallium(I) acetate 0.001953125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt merR and Synpcc7942_0840 are separated by 36 nucleotides Synpcc7942_0840 and Synpcc7942_0841 are separated by 197 nucleotides Synpcc7942_0841 and gor are separated by 53 nucleotides
Synpcc7942_0839: merR - Nitrilase, at 833,950 to 834,954
merR
Synpcc7942_0840: Synpcc7942_0840 - hypothetical protein, at 834,991 to 835,473
_0840
Synpcc7942_0841: Synpcc7942_0841 - putative flavoprotein involved in K+ transport, at 835,671 to 837,011
_0841
Synpcc7942_0842: gor - glutathione reductase, at 837,065 to 838,405
gor
Position (kb) 835
836
837
838 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8 at 834.711 kb on + strand, within merR at 834.746 kb on + strand, within merR at 834.754 kb on - strand, within merR at 834.800 kb on + strand, within merR at 834.904 kb on + strand at 834.912 kb on - strand at 834.912 kb on - strand at 834.927 kb on - strand at 834.962 kb on + strand at 835.139 kb on + strand, within Synpcc7942_0840 at 835.233 kb on - strand at 835.259 kb on + strand, within Synpcc7942_0840 at 835.259 kb on + strand, within Synpcc7942_0840 at 835.262 kb on - strand, within Synpcc7942_0840 at 835.341 kb on + strand, within Synpcc7942_0840 at 835.472 kb on - strand at 835.673 kb on + strand at 835.705 kb on + strand at 835.705 kb on + strand at 835.706 kb on + strand at 835.713 kb on - strand at 835.713 kb on - strand at 835.714 kb on - strand at 835.714 kb on - strand at 835.732 kb on + strand at 835.740 kb on - strand at 835.770 kb on + strand at 835.778 kb on - strand at 835.792 kb on - strand at 835.813 kb on + strand, within Synpcc7942_0841 at 835.823 kb on - strand, within Synpcc7942_0841 at 835.827 kb on + strand, within Synpcc7942_0841 at 835.828 kb on - strand, within Synpcc7942_0841 at 835.835 kb on - strand, within Synpcc7942_0841 at 835.860 kb on + strand, within Synpcc7942_0841 at 835.933 kb on - strand, within Synpcc7942_0841 at 835.983 kb on + strand, within Synpcc7942_0841 at 836.003 kb on - strand, within Synpcc7942_0841 at 836.028 kb on - strand, within Synpcc7942_0841 at 836.062 kb on + strand, within Synpcc7942_0841 at 836.062 kb on + strand, within Synpcc7942_0841 at 836.085 kb on + strand, within Synpcc7942_0841 at 836.090 kb on + strand, within Synpcc7942_0841 at 836.093 kb on - strand, within Synpcc7942_0841 at 836.098 kb on - strand, within Synpcc7942_0841 at 836.098 kb on - strand, within Synpcc7942_0841 at 836.100 kb on + strand, within Synpcc7942_0841 at 836.115 kb on - strand, within Synpcc7942_0841 at 836.123 kb on + strand, within Synpcc7942_0841 at 836.123 kb on + strand, within Synpcc7942_0841 at 836.123 kb on + strand, within Synpcc7942_0841 at 836.148 kb on - strand, within Synpcc7942_0841 at 836.160 kb on + strand, within Synpcc7942_0841 at 836.206 kb on + strand, within Synpcc7942_0841 at 836.206 kb on + strand, within Synpcc7942_0841 at 836.206 kb on + strand, within Synpcc7942_0841 at 836.206 kb on + strand, within Synpcc7942_0841 at 836.214 kb on - strand, within Synpcc7942_0841 at 836.214 kb on - strand, within Synpcc7942_0841 at 836.214 kb on - strand, within Synpcc7942_0841 at 836.214 kb on - strand, within Synpcc7942_0841 at 836.214 kb on - strand, within Synpcc7942_0841 at 836.214 kb on - strand, within Synpcc7942_0841 at 836.224 kb on - strand, within Synpcc7942_0841 at 836.232 kb on + strand, within Synpcc7942_0841 at 836.277 kb on + strand at 836.282 kb on + strand, within Synpcc7942_0841 at 836.301 kb on - strand, within Synpcc7942_0841 at 836.309 kb on - strand, within Synpcc7942_0841 at 836.330 kb on - strand, within Synpcc7942_0841 at 836.342 kb on - strand, within Synpcc7942_0841 at 836.348 kb on + strand, within Synpcc7942_0841 at 836.392 kb on - strand, within Synpcc7942_0841 at 836.407 kb on + strand, within Synpcc7942_0841 at 836.415 kb on + strand, within Synpcc7942_0841 at 836.449 kb on + strand, within Synpcc7942_0841 at 836.503 kb on - strand, within Synpcc7942_0841 at 836.505 kb on + strand at 836.518 kb on - strand, within Synpcc7942_0841 at 836.539 kb on + strand, within Synpcc7942_0841 at 836.539 kb on + strand, within Synpcc7942_0841 at 836.549 kb on - strand, within Synpcc7942_0841 at 836.559 kb on + strand, within Synpcc7942_0841 at 836.647 kb on + strand, within Synpcc7942_0841 at 836.681 kb on - strand, within Synpcc7942_0841 at 836.715 kb on - strand, within Synpcc7942_0841 at 836.726 kb on + strand, within Synpcc7942_0841 at 836.740 kb on - strand, within Synpcc7942_0841 at 836.769 kb on + strand, within Synpcc7942_0841 at 836.793 kb on + strand, within Synpcc7942_0841 at 836.795 kb on - strand, within Synpcc7942_0841 at 836.803 kb on - strand, within Synpcc7942_0841 at 836.811 kb on - strand, within Synpcc7942_0841 at 836.811 kb on - strand, within Synpcc7942_0841 at 836.838 kb on - strand, within Synpcc7942_0841 at 836.852 kb on + strand, within Synpcc7942_0841 at 836.855 kb on - strand, within Synpcc7942_0841 at 836.856 kb on - strand, within Synpcc7942_0841 at 836.865 kb on - strand, within Synpcc7942_0841 at 836.881 kb on + strand at 836.881 kb on + strand at 836.881 kb on - strand at 836.889 kb on - strand at 836.907 kb on - strand at 836.927 kb on - strand at 836.997 kb on + strand at 836.999 kb on + strand at 837.007 kb on - strand at 837.007 kb on - strand at 837.007 kb on - strand at 837.007 kb on - strand at 837.016 kb on + strand at 837.024 kb on - strand at 837.024 kb on - strand at 837.041 kb on + strand at 837.070 kb on - strand at 837.075 kb on + strand at 837.075 kb on + strand at 837.075 kb on + strand at 837.075 kb on + strand at 837.083 kb on - strand at 837.083 kb on - strand at 837.083 kb on - strand at 837.141 kb on + strand at 837.149 kb on - strand at 837.192 kb on - strand at 837.246 kb on + strand, within gor at 837.264 kb on + strand, within gor at 837.276 kb on + strand, within gor at 837.276 kb on + strand, within gor at 837.284 kb on - strand, within gor at 837.284 kb on - strand, within gor at 837.309 kb on + strand, within gor at 837.311 kb on - strand, within gor at 837.329 kb on + strand, within gor at 837.358 kb on + strand, within gor at 837.358 kb on + strand, within gor at 837.361 kb on - strand, within gor at 837.364 kb on + strand, within gor at 837.366 kb on - strand, within gor at 837.366 kb on - strand, within gor at 837.366 kb on - strand, within gor at 837.366 kb on - strand, within gor at 837.372 kb on - strand, within gor at 837.383 kb on + strand, within gor at 837.458 kb on - strand, within gor at 837.480 kb on + strand, within gor at 837.481 kb on + strand, within gor at 837.514 kb on - strand, within gor at 837.535 kb on - strand, within gor at 837.540 kb on - strand, within gor at 837.557 kb on - strand, within gor at 837.589 kb on - strand, within gor at 837.591 kb on - strand, within gor at 837.626 kb on + strand, within gor at 837.641 kb on - strand, within gor at 837.672 kb on + strand, within gor at 837.677 kb on + strand, within gor at 837.678 kb on - strand, within gor at 837.720 kb on - strand, within gor at 837.742 kb on - strand, within gor at 837.744 kb on - strand, within gor at 837.744 kb on - strand, within gor at 837.751 kb on + strand, within gor at 837.754 kb on - strand, within gor at 837.781 kb on - strand, within gor at 837.787 kb on + strand, within gor at 837.787 kb on + strand, within gor at 837.789 kb on - strand, within gor at 837.832 kb on + strand, within gor at 837.838 kb on + strand, within gor at 837.846 kb on - strand, within gor at 837.856 kb on - strand, within gor at 837.885 kb on + strand, within gor at 837.887 kb on + strand, within gor at 837.887 kb on + strand, within gor at 837.895 kb on - strand, within gor at 837.902 kb on + strand, within gor at 837.922 kb on + strand, within gor
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001953125 mg/ml remove 834,711 + merR Synpcc7942_0839 0.76 -1.1 834,746 + merR Synpcc7942_0839 0.79 +0.9 834,754 - merR Synpcc7942_0839 0.80 +0.6 834,800 + merR Synpcc7942_0839 0.85 +1.4 834,904 + +0.9 834,912 - +0.8 834,912 - -2.7 834,927 - +1.5 834,962 + -1.1 835,139 + Synpcc7942_0840 0.31 -2.1 835,233 - +1.4 835,259 + Synpcc7942_0840 0.55 -0.7 835,259 + Synpcc7942_0840 0.55 +0.9 835,262 - Synpcc7942_0840 0.56 +1.7 835,341 + Synpcc7942_0840 0.72 -1.2 835,472 - +0.3 835,673 + +1.7 835,705 + -0.6 835,705 + +1.4 835,706 + -0.2 835,713 - -0.8 835,713 - +2.0 835,714 - +0.4 835,714 - +0.1 835,732 + +2.0 835,740 - +0.7 835,770 + -1.1 835,778 - +0.6 835,792 - +0.9 835,813 + Synpcc7942_0841 0.11 +0.0 835,823 - Synpcc7942_0841 0.11 +1.1 835,827 + Synpcc7942_0841 0.12 +0.1 835,828 - Synpcc7942_0841 0.12 -0.4 835,835 - Synpcc7942_0841 0.12 +0.3 835,860 + Synpcc7942_0841 0.14 +3.6 835,933 - Synpcc7942_0841 0.20 +1.0 835,983 + Synpcc7942_0841 0.23 +1.9 836,003 - Synpcc7942_0841 0.25 -1.6 836,028 - Synpcc7942_0841 0.27 -1.7 836,062 + Synpcc7942_0841 0.29 +1.9 836,062 + Synpcc7942_0841 0.29 +0.9 836,085 + Synpcc7942_0841 0.31 -2.1 836,090 + Synpcc7942_0841 0.31 +0.6 836,093 - Synpcc7942_0841 0.31 +1.0 836,098 - Synpcc7942_0841 0.32 -2.1 836,098 - Synpcc7942_0841 0.32 +1.5 836,100 + Synpcc7942_0841 0.32 -0.5 836,115 - Synpcc7942_0841 0.33 -1.1 836,123 + Synpcc7942_0841 0.34 -2.1 836,123 + Synpcc7942_0841 0.34 +0.4 836,123 + Synpcc7942_0841 0.34 -0.0 836,148 - Synpcc7942_0841 0.36 +0.6 836,160 + Synpcc7942_0841 0.36 -3.1 836,206 + Synpcc7942_0841 0.40 -0.7 836,206 + Synpcc7942_0841 0.40 -1.1 836,206 + Synpcc7942_0841 0.40 +1.1 836,206 + Synpcc7942_0841 0.40 +0.4 836,214 - Synpcc7942_0841 0.40 +2.0 836,214 - Synpcc7942_0841 0.40 +3.5 836,214 - Synpcc7942_0841 0.40 +0.1 836,214 - Synpcc7942_0841 0.40 -0.4 836,214 - Synpcc7942_0841 0.40 +1.3 836,214 - Synpcc7942_0841 0.40 +0.4 836,224 - Synpcc7942_0841 0.41 -1.1 836,232 + Synpcc7942_0841 0.42 +0.4 836,277 + -1.1 836,282 + Synpcc7942_0841 0.46 -0.4 836,301 - Synpcc7942_0841 0.47 +0.2 836,309 - Synpcc7942_0841 0.48 -0.1 836,330 - Synpcc7942_0841 0.49 +0.6 836,342 - Synpcc7942_0841 0.50 +1.2 836,348 + Synpcc7942_0841 0.50 +0.4 836,392 - Synpcc7942_0841 0.54 +0.9 836,407 + Synpcc7942_0841 0.55 +1.0 836,415 + Synpcc7942_0841 0.55 +2.2 836,449 + Synpcc7942_0841 0.58 +1.4 836,503 - Synpcc7942_0841 0.62 +0.8 836,505 + -1.1 836,518 - Synpcc7942_0841 0.63 +7.8 836,539 + Synpcc7942_0841 0.65 +1.9 836,539 + Synpcc7942_0841 0.65 +0.3 836,549 - Synpcc7942_0841 0.65 +1.2 836,559 + Synpcc7942_0841 0.66 +1.1 836,647 + Synpcc7942_0841 0.73 +1.0 836,681 - Synpcc7942_0841 0.75 +0.0 836,715 - Synpcc7942_0841 0.78 +1.2 836,726 + Synpcc7942_0841 0.79 -1.7 836,740 - Synpcc7942_0841 0.80 +0.2 836,769 + Synpcc7942_0841 0.82 +1.3 836,793 + Synpcc7942_0841 0.84 +1.6 836,795 - Synpcc7942_0841 0.84 +0.5 836,803 - Synpcc7942_0841 0.84 +0.9 836,811 - Synpcc7942_0841 0.85 -0.7 836,811 - Synpcc7942_0841 0.85 -1.1 836,838 - Synpcc7942_0841 0.87 +1.0 836,852 + Synpcc7942_0841 0.88 -0.4 836,855 - Synpcc7942_0841 0.88 +1.9 836,856 - Synpcc7942_0841 0.88 -0.9 836,865 - Synpcc7942_0841 0.89 +2.4 836,881 + +1.6 836,881 + -0.6 836,881 - +2.0 836,889 - -0.6 836,907 - +1.2 836,927 - -0.3 836,997 + -1.1 836,999 + +1.4 837,007 - +3.1 837,007 - +0.9 837,007 - +1.4 837,007 - +1.2 837,016 + -0.1 837,024 - +1.5 837,024 - +1.7 837,041 + +0.4 837,070 - +0.9 837,075 + +0.9 837,075 + -3.5 837,075 + -0.9 837,075 + -0.4 837,083 - +0.9 837,083 - +2.0 837,083 - +1.6 837,141 + +1.7 837,149 - -2.7 837,192 - +1.4 837,246 + gor Synpcc7942_0842 0.13 +1.9 837,264 + gor Synpcc7942_0842 0.15 +0.2 837,276 + gor Synpcc7942_0842 0.16 +0.9 837,276 + gor Synpcc7942_0842 0.16 -1.1 837,284 - gor Synpcc7942_0842 0.16 +1.9 837,284 - gor Synpcc7942_0842 0.16 -1.1 837,309 + gor Synpcc7942_0842 0.18 +1.8 837,311 - gor Synpcc7942_0842 0.18 -0.1 837,329 + gor Synpcc7942_0842 0.20 -0.8 837,358 + gor Synpcc7942_0842 0.22 -1.1 837,358 + gor Synpcc7942_0842 0.22 +0.7 837,361 - gor Synpcc7942_0842 0.22 +1.1 837,364 + gor Synpcc7942_0842 0.22 +0.3 837,366 - gor Synpcc7942_0842 0.22 +0.8 837,366 - gor Synpcc7942_0842 0.22 -1.1 837,366 - gor Synpcc7942_0842 0.22 +3.0 837,366 - gor Synpcc7942_0842 0.22 -1.1 837,372 - gor Synpcc7942_0842 0.23 +0.3 837,383 + gor Synpcc7942_0842 0.24 +2.1 837,458 - gor Synpcc7942_0842 0.29 -2.1 837,480 + gor Synpcc7942_0842 0.31 -0.2 837,481 + gor Synpcc7942_0842 0.31 +0.4 837,514 - gor Synpcc7942_0842 0.33 -0.1 837,535 - gor Synpcc7942_0842 0.35 +0.4 837,540 - gor Synpcc7942_0842 0.35 -0.7 837,557 - gor Synpcc7942_0842 0.37 -0.0 837,589 - gor Synpcc7942_0842 0.39 -0.7 837,591 - gor Synpcc7942_0842 0.39 -0.4 837,626 + gor Synpcc7942_0842 0.42 -2.1 837,641 - gor Synpcc7942_0842 0.43 +1.3 837,672 + gor Synpcc7942_0842 0.45 -2.1 837,677 + gor Synpcc7942_0842 0.46 -0.1 837,678 - gor Synpcc7942_0842 0.46 +1.0 837,720 - gor Synpcc7942_0842 0.49 +2.3 837,742 - gor Synpcc7942_0842 0.50 -0.4 837,744 - gor Synpcc7942_0842 0.51 -0.6 837,744 - gor Synpcc7942_0842 0.51 +1.7 837,751 + gor Synpcc7942_0842 0.51 -2.1 837,754 - gor Synpcc7942_0842 0.51 +0.9 837,781 - gor Synpcc7942_0842 0.53 -2.1 837,787 + gor Synpcc7942_0842 0.54 +1.2 837,787 + gor Synpcc7942_0842 0.54 +0.2 837,789 - gor Synpcc7942_0842 0.54 -0.7 837,832 + gor Synpcc7942_0842 0.57 -1.1 837,838 + gor Synpcc7942_0842 0.58 +0.9 837,846 - gor Synpcc7942_0842 0.58 -2.7 837,856 - gor Synpcc7942_0842 0.59 +3.3 837,885 + gor Synpcc7942_0842 0.61 -2.7 837,887 + gor Synpcc7942_0842 0.61 -1.1 837,887 + gor Synpcc7942_0842 0.61 -2.7 837,895 - gor Synpcc7942_0842 0.62 +1.9 837,902 + gor Synpcc7942_0842 0.62 +1.0 837,922 + gor Synpcc7942_0842 0.64 +2.0
Or see this region's nucleotide sequence