Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21240 and SM_b21241 are separated by 313 nucleotides SM_b21241 and SM_b21242 are separated by 35 nucleotides
SM_b21240: SM_b21240 - MPA1 family protein, at 805,755 to 807,743
_b21240
SM_b21241: SM_b21241 - hypothetical protein, at 808,057 to 809,349
_b21241
SM_b21242: SM_b21242 - glycosyltransferase, at 809,385 to 810,509
_b21242
Position (kb) 808
809
810 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 807.097 kb on + strand at 807.097 kb on + strand, within SM_b21240 at 807.097 kb on + strand, within SM_b21240 at 807.098 kb on - strand, within SM_b21240 at 807.154 kb on - strand, within SM_b21240 at 807.349 kb on + strand, within SM_b21240 at 807.350 kb on - strand, within SM_b21240 at 807.530 kb on + strand, within SM_b21240 at 807.530 kb on + strand, within SM_b21240 at 807.537 kb on - strand, within SM_b21240 at 807.537 kb on - strand, within SM_b21240 at 807.539 kb on - strand, within SM_b21240 at 807.714 kb on + strand at 807.755 kb on - strand at 807.818 kb on - strand at 807.912 kb on - strand at 807.914 kb on + strand at 807.914 kb on + strand at 807.914 kb on + strand at 807.914 kb on + strand at 807.915 kb on - strand at 807.963 kb on + strand at 808.101 kb on + strand at 808.101 kb on + strand at 808.108 kb on + strand at 808.151 kb on + strand at 808.151 kb on + strand at 808.152 kb on - strand at 808.152 kb on - strand at 808.152 kb on - strand at 808.152 kb on - strand at 808.155 kb on + strand at 808.155 kb on + strand at 808.155 kb on + strand at 808.156 kb on - strand at 808.156 kb on - strand at 808.156 kb on - strand at 808.156 kb on - strand at 808.156 kb on - strand at 808.156 kb on - strand at 808.331 kb on + strand, within SM_b21241 at 808.331 kb on + strand, within SM_b21241 at 808.331 kb on + strand, within SM_b21241 at 808.332 kb on - strand, within SM_b21241 at 808.335 kb on + strand, within SM_b21241 at 808.336 kb on - strand, within SM_b21241 at 808.421 kb on - strand, within SM_b21241 at 808.422 kb on + strand, within SM_b21241 at 808.422 kb on + strand, within SM_b21241 at 808.422 kb on + strand, within SM_b21241 at 808.422 kb on + strand, within SM_b21241 at 808.423 kb on - strand, within SM_b21241 at 808.423 kb on - strand, within SM_b21241 at 808.423 kb on - strand, within SM_b21241 at 808.423 kb on - strand at 808.423 kb on - strand, within SM_b21241 at 808.477 kb on + strand, within SM_b21241 at 808.477 kb on + strand, within SM_b21241 at 808.539 kb on + strand, within SM_b21241 at 808.540 kb on - strand, within SM_b21241 at 808.549 kb on + strand, within SM_b21241 at 808.643 kb on - strand, within SM_b21241 at 808.773 kb on + strand, within SM_b21241 at 808.773 kb on + strand, within SM_b21241 at 808.774 kb on - strand, within SM_b21241 at 808.774 kb on - strand, within SM_b21241 at 808.783 kb on + strand, within SM_b21241 at 808.784 kb on - strand, within SM_b21241 at 808.784 kb on - strand, within SM_b21241 at 808.851 kb on + strand, within SM_b21241 at 808.851 kb on + strand, within SM_b21241 at 808.852 kb on - strand, within SM_b21241 at 808.852 kb on - strand, within SM_b21241 at 808.852 kb on - strand, within SM_b21241 at 808.852 kb on - strand, within SM_b21241 at 808.878 kb on + strand, within SM_b21241 at 808.878 kb on + strand, within SM_b21241 at 808.880 kb on + strand, within SM_b21241 at 808.880 kb on + strand, within SM_b21241 at 808.880 kb on + strand, within SM_b21241 at 808.880 kb on + strand, within SM_b21241 at 808.880 kb on + strand, within SM_b21241 at 808.881 kb on - strand, within SM_b21241 at 808.881 kb on - strand, within SM_b21241 at 808.881 kb on - strand, within SM_b21241 at 808.881 kb on - strand, within SM_b21241 at 808.881 kb on - strand, within SM_b21241 at 808.893 kb on + strand, within SM_b21241 at 808.995 kb on - strand, within SM_b21241 at 808.995 kb on - strand, within SM_b21241 at 808.995 kb on - strand, within SM_b21241 at 809.006 kb on + strand, within SM_b21241 at 809.006 kb on + strand, within SM_b21241 at 809.006 kb on + strand, within SM_b21241 at 809.007 kb on - strand, within SM_b21241 at 809.007 kb on - strand, within SM_b21241 at 809.101 kb on + strand, within SM_b21241 at 809.366 kb on + strand at 809.367 kb on - strand at 809.370 kb on + strand at 809.450 kb on + strand at 809.450 kb on + strand at 809.450 kb on + strand at 809.451 kb on - strand at 809.721 kb on + strand, within SM_b21242
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 807,097 + +4.5 807,097 + SM_b21240 0.67 -0.7 807,097 + SM_b21240 0.67 +0.4 807,098 - SM_b21240 0.68 +0.3 807,154 - SM_b21240 0.70 -0.1 807,349 + SM_b21240 0.80 +0.5 807,350 - SM_b21240 0.80 -0.3 807,530 + SM_b21240 0.89 +0.1 807,530 + SM_b21240 0.89 -0.3 807,537 - SM_b21240 0.90 +1.3 807,537 - SM_b21240 0.90 -1.8 807,539 - SM_b21240 0.90 +0.2 807,714 + +0.3 807,755 - +0.2 807,818 - +0.4 807,912 - +0.9 807,914 + -0.6 807,914 + -0.8 807,914 + +0.1 807,914 + +0.3 807,915 - -0.1 807,963 + +0.3 808,101 + +1.1 808,101 + -0.1 808,108 + +0.5 808,151 + +0.3 808,151 + +0.2 808,152 - +0.3 808,152 - -0.1 808,152 - +0.4 808,152 - +0.3 808,155 + -1.5 808,155 + +0.3 808,155 + -0.2 808,156 - +1.3 808,156 - -1.0 808,156 - -3.0 808,156 - +0.7 808,156 - -0.4 808,156 - -0.2 808,331 + SM_b21241 0.21 -1.9 808,331 + SM_b21241 0.21 -0.4 808,331 + SM_b21241 0.21 +0.7 808,332 - SM_b21241 0.21 -1.6 808,335 + SM_b21241 0.22 +0.4 808,336 - SM_b21241 0.22 +1.1 808,421 - SM_b21241 0.28 -0.7 808,422 + SM_b21241 0.28 -0.1 808,422 + SM_b21241 0.28 -0.5 808,422 + SM_b21241 0.28 -1.0 808,422 + SM_b21241 0.28 -0.3 808,423 - SM_b21241 0.28 -2.0 808,423 - SM_b21241 0.28 +0.2 808,423 - SM_b21241 0.28 -1.3 808,423 - +3.7 808,423 - SM_b21241 0.28 -0.1 808,477 + SM_b21241 0.32 -0.1 808,477 + SM_b21241 0.32 +0.4 808,539 + SM_b21241 0.37 +0.6 808,540 - SM_b21241 0.37 -0.2 808,549 + SM_b21241 0.38 -0.3 808,643 - SM_b21241 0.45 -0.0 808,773 + SM_b21241 0.55 -0.5 808,773 + SM_b21241 0.55 -0.9 808,774 - SM_b21241 0.55 -1.4 808,774 - SM_b21241 0.55 -2.4 808,783 + SM_b21241 0.56 -1.3 808,784 - SM_b21241 0.56 -1.3 808,784 - SM_b21241 0.56 +0.5 808,851 + SM_b21241 0.61 +1.4 808,851 + SM_b21241 0.61 -0.0 808,852 - SM_b21241 0.61 -1.2 808,852 - SM_b21241 0.61 -0.6 808,852 - SM_b21241 0.61 +0.3 808,852 - SM_b21241 0.61 +0.5 808,878 + SM_b21241 0.63 +1.6 808,878 + SM_b21241 0.63 -0.1 808,880 + SM_b21241 0.64 -0.9 808,880 + SM_b21241 0.64 +0.1 808,880 + SM_b21241 0.64 -3.2 808,880 + SM_b21241 0.64 -0.2 808,880 + SM_b21241 0.64 +0.1 808,881 - SM_b21241 0.64 -0.0 808,881 - SM_b21241 0.64 +0.5 808,881 - SM_b21241 0.64 +0.4 808,881 - SM_b21241 0.64 +0.2 808,881 - SM_b21241 0.64 -0.2 808,893 + SM_b21241 0.65 -0.1 808,995 - SM_b21241 0.73 -2.6 808,995 - SM_b21241 0.73 +0.9 808,995 - SM_b21241 0.73 -0.7 809,006 + SM_b21241 0.73 -0.2 809,006 + SM_b21241 0.73 +1.1 809,006 + SM_b21241 0.73 +0.0 809,007 - SM_b21241 0.73 -1.0 809,007 - SM_b21241 0.73 +0.3 809,101 + SM_b21241 0.81 -0.2 809,366 + -1.4 809,367 - -0.7 809,370 + -0.1 809,450 + +0.3 809,450 + -0.7 809,450 + +0.2 809,451 - -0.7 809,721 + SM_b21242 0.30 +1.4
Or see this region's nucleotide sequence