Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20427 and SM_b20428 are separated by 58 nucleotides SM_b20428 and SM_b20429 are separated by 102 nucleotides SM_b20429 and SM_b20430 are separated by 2 nucleotides
SM_b20427: SM_b20427 - amino acid ABC transporter ATP-binding protein, at 442,445 to 443,230
_b20427
SM_b20428: SM_b20428 - amino acid ABC transporter substrate-binding protein, at 443,289 to 444,140
_b20428
SM_b20429: SM_b20429 - amino acid ABC transporter permease, at 444,243 to 444,902
_b20429
SM_b20430: SM_b20430 - amino acid ABC transporter permease, at 444,905 to 445,567
_b20430
Position (kb) 443
444
445 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 442.653 kb on - strand, within SM_b20427 at 442.759 kb on + strand, within SM_b20427 at 442.760 kb on - strand, within SM_b20427 at 443.228 kb on + strand at 443.441 kb on + strand, within SM_b20428 at 443.547 kb on + strand, within SM_b20428 at 443.712 kb on + strand, within SM_b20428 at 443.712 kb on + strand, within SM_b20428 at 443.874 kb on + strand, within SM_b20428 at 443.967 kb on + strand, within SM_b20428 at 444.078 kb on + strand at 444.139 kb on - strand at 444.261 kb on + strand at 444.262 kb on - strand at 444.402 kb on + strand, within SM_b20429 at 444.402 kb on + strand, within SM_b20429 at 444.403 kb on - strand, within SM_b20429 at 444.403 kb on - strand, within SM_b20429 at 444.403 kb on - strand, within SM_b20429 at 444.404 kb on + strand, within SM_b20429 at 444.428 kb on + strand, within SM_b20429 at 444.429 kb on - strand, within SM_b20429 at 444.429 kb on - strand, within SM_b20429 at 444.453 kb on + strand, within SM_b20429 at 444.454 kb on - strand, within SM_b20429 at 444.478 kb on + strand, within SM_b20429 at 444.479 kb on - strand, within SM_b20429 at 444.535 kb on - strand, within SM_b20429 at 444.816 kb on + strand, within SM_b20429 at 444.817 kb on - strand, within SM_b20429 at 445.118 kb on + strand, within SM_b20430 at 445.129 kb on - strand, within SM_b20430 at 445.130 kb on + strand, within SM_b20430 at 445.130 kb on + strand, within SM_b20430 at 445.131 kb on - strand, within SM_b20430
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 442,653 - SM_b20427 0.26 -0.4 442,759 + SM_b20427 0.40 +1.2 442,760 - SM_b20427 0.40 -0.6 443,228 + -1.3 443,441 + SM_b20428 0.18 -0.6 443,547 + SM_b20428 0.30 -1.0 443,712 + SM_b20428 0.50 +1.1 443,712 + SM_b20428 0.50 -1.1 443,874 + SM_b20428 0.69 -3.8 443,967 + SM_b20428 0.80 -0.8 444,078 + -0.7 444,139 - -0.1 444,261 + +0.6 444,262 - +0.0 444,402 + SM_b20429 0.24 +0.8 444,402 + SM_b20429 0.24 -0.2 444,403 - SM_b20429 0.24 -0.3 444,403 - SM_b20429 0.24 +0.0 444,403 - SM_b20429 0.24 -0.7 444,404 + SM_b20429 0.24 -1.1 444,428 + SM_b20429 0.28 -0.2 444,429 - SM_b20429 0.28 -0.6 444,429 - SM_b20429 0.28 -1.6 444,453 + SM_b20429 0.32 +1.0 444,454 - SM_b20429 0.32 +0.1 444,478 + SM_b20429 0.36 -0.2 444,479 - SM_b20429 0.36 +0.2 444,535 - SM_b20429 0.44 +1.9 444,816 + SM_b20429 0.87 -0.6 444,817 - SM_b20429 0.87 -0.2 445,118 + SM_b20430 0.32 -0.3 445,129 - SM_b20430 0.34 +2.0 445,130 + SM_b20430 0.34 +0.8 445,130 + SM_b20430 0.34 +0.9 445,131 - SM_b20430 0.34 +0.3
Or see this region's nucleotide sequence