Experiment: L-Tryptophan (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS32780 and RR42_RS32785 are separated by 19 nucleotides RR42_RS32785 and RR42_RS32790 are separated by 380 nucleotides RR42_RS32790 and RR42_RS32795 are separated by 53 nucleotides
RR42_RS32780: RR42_RS32780 - multidrug transporter, at 2,748,078 to 2,748,986
_RS32780
RR42_RS32785: RR42_RS32785 - chemotaxis protein, at 2,749,006 to 2,750,937
_RS32785
RR42_RS32790: RR42_RS32790 - hypothetical protein, at 2,751,318 to 2,751,569
_RS32790
RR42_RS32795: RR42_RS32795 - DNA polymerase III subunit alpha, at 2,751,623 to 2,755,069
_RS32795
Position (kb)
2749
2750
2751 Strain fitness (log2 ratio)
-1
0
1 at 2748.255 kb on + strand, within RR42_RS32780 at 2748.255 kb on + strand, within RR42_RS32780 at 2748.256 kb on - strand, within RR42_RS32780 at 2748.361 kb on - strand, within RR42_RS32780 at 2748.493 kb on + strand, within RR42_RS32780 at 2748.493 kb on + strand, within RR42_RS32780 at 2748.493 kb on + strand, within RR42_RS32780 at 2748.494 kb on - strand, within RR42_RS32780 at 2748.610 kb on - strand, within RR42_RS32780 at 2748.774 kb on + strand, within RR42_RS32780 at 2748.774 kb on + strand, within RR42_RS32780 at 2748.775 kb on - strand, within RR42_RS32780 at 2748.775 kb on - strand, within RR42_RS32780 at 2748.775 kb on - strand, within RR42_RS32780 at 2748.804 kb on + strand, within RR42_RS32780 at 2748.805 kb on - strand, within RR42_RS32780 at 2749.884 kb on + strand, within RR42_RS32785 at 2749.885 kb on - strand, within RR42_RS32785 at 2750.432 kb on + strand, within RR42_RS32785 at 2750.433 kb on - strand, within RR42_RS32785 at 2750.830 kb on + strand at 2750.830 kb on + strand at 2750.853 kb on - strand at 2750.996 kb on - strand at 2751.095 kb on + strand at 2751.096 kb on - strand at 2751.096 kb on - strand at 2751.170 kb on + strand at 2751.322 kb on + strand at 2751.322 kb on + strand at 2751.567 kb on + strand at 2751.606 kb on + strand at 2751.625 kb on - strand at 2751.836 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (N) remove 2,748,255 + RR42_RS32780 0.19 +1.1 2,748,255 + RR42_RS32780 0.19 -0.0 2,748,256 - RR42_RS32780 0.20 +0.3 2,748,361 - RR42_RS32780 0.31 +1.3 2,748,493 + RR42_RS32780 0.46 -0.6 2,748,493 + RR42_RS32780 0.46 +1.2 2,748,493 + RR42_RS32780 0.46 -0.4 2,748,494 - RR42_RS32780 0.46 +0.2 2,748,610 - RR42_RS32780 0.59 -0.4 2,748,774 + RR42_RS32780 0.77 +0.5 2,748,774 + RR42_RS32780 0.77 +0.3 2,748,775 - RR42_RS32780 0.77 -1.0 2,748,775 - RR42_RS32780 0.77 -0.8 2,748,775 - RR42_RS32780 0.77 -0.3 2,748,804 + RR42_RS32780 0.80 +0.2 2,748,805 - RR42_RS32780 0.80 +0.3 2,749,884 + RR42_RS32785 0.45 -0.8 2,749,885 - RR42_RS32785 0.45 -0.2 2,750,432 + RR42_RS32785 0.74 +0.4 2,750,433 - RR42_RS32785 0.74 -0.6 2,750,830 + +0.5 2,750,830 + +1.2 2,750,853 - -0.2 2,750,996 - +0.2 2,751,095 + +0.6 2,751,096 - +1.2 2,751,096 - +0.3 2,751,170 + +0.3 2,751,322 + -1.5 2,751,322 + +0.8 2,751,567 + +0.2 2,751,606 + +0.2 2,751,625 - -0.3 2,751,836 - +0.2
Or see this region's nucleotide sequence