Experiment: L-Tryptophan (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS31655 and RR42_RS31660 are separated by 173 nucleotides
RR42_RS31655: RR42_RS31655 - hypothetical protein, at 2,482,957 to 2,483,160
_RS31655
RR42_RS31660: RR42_RS31660 - hypothetical protein, at 2,483,334 to 2,484,710
_RS31660
Position (kb)
2482
2483
2484 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2482.020 kb on + strand at 2482.262 kb on + strand at 2482.263 kb on - strand at 2482.334 kb on + strand at 2482.475 kb on + strand at 2482.476 kb on - strand at 2482.583 kb on - strand at 2482.744 kb on + strand at 2482.744 kb on + strand at 2482.744 kb on + strand at 2482.801 kb on + strand at 2482.806 kb on + strand at 2482.806 kb on + strand at 2482.806 kb on + strand at 2482.807 kb on - strand at 2482.846 kb on + strand at 2482.847 kb on - strand at 2482.870 kb on + strand at 2482.871 kb on - strand at 2482.959 kb on - strand at 2482.959 kb on - strand at 2483.021 kb on + strand, within RR42_RS31655 at 2483.021 kb on + strand, within RR42_RS31655 at 2483.022 kb on - strand, within RR42_RS31655 at 2483.022 kb on - strand, within RR42_RS31655 at 2483.136 kb on + strand, within RR42_RS31655 at 2483.137 kb on - strand, within RR42_RS31655 at 2483.277 kb on - strand at 2483.279 kb on + strand at 2483.280 kb on - strand at 2483.367 kb on + strand at 2483.367 kb on + strand at 2483.367 kb on + strand at 2483.367 kb on + strand at 2483.367 kb on + strand at 2483.376 kb on - strand at 2483.384 kb on + strand at 2483.390 kb on + strand at 2483.391 kb on - strand at 2483.433 kb on + strand at 2483.433 kb on + strand at 2483.433 kb on + strand at 2483.655 kb on + strand, within RR42_RS31660 at 2483.752 kb on - strand, within RR42_RS31660 at 2483.816 kb on + strand, within RR42_RS31660 at 2483.816 kb on + strand, within RR42_RS31660 at 2483.883 kb on + strand, within RR42_RS31660 at 2483.884 kb on - strand, within RR42_RS31660 at 2483.887 kb on + strand, within RR42_RS31660 at 2483.887 kb on + strand, within RR42_RS31660 at 2483.945 kb on - strand, within RR42_RS31660 at 2484.060 kb on - strand, within RR42_RS31660 at 2484.127 kb on - strand, within RR42_RS31660 at 2484.127 kb on - strand, within RR42_RS31660 at 2484.153 kb on + strand, within RR42_RS31660 at 2484.154 kb on - strand, within RR42_RS31660
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (N) remove 2,482,020 + +1.2 2,482,262 + +2.1 2,482,263 - -0.5 2,482,334 + +0.2 2,482,475 + -0.1 2,482,476 - -0.5 2,482,583 - -0.8 2,482,744 + -0.3 2,482,744 + -0.0 2,482,744 + +0.9 2,482,801 + -0.0 2,482,806 + +0.3 2,482,806 + +1.1 2,482,806 + -0.0 2,482,807 - -1.3 2,482,846 + -0.2 2,482,847 - +1.3 2,482,870 + +0.0 2,482,871 - -0.4 2,482,959 - -0.3 2,482,959 - -0.6 2,483,021 + RR42_RS31655 0.31 -0.0 2,483,021 + RR42_RS31655 0.31 -0.6 2,483,022 - RR42_RS31655 0.32 +0.3 2,483,022 - RR42_RS31655 0.32 -1.7 2,483,136 + RR42_RS31655 0.88 +0.2 2,483,137 - RR42_RS31655 0.88 -0.9 2,483,277 - -0.2 2,483,279 + +0.6 2,483,280 - +0.2 2,483,367 + +0.0 2,483,367 + +1.4 2,483,367 + -0.9 2,483,367 + -0.1 2,483,367 + +0.1 2,483,376 - +0.1 2,483,384 + +0.2 2,483,390 + +0.8 2,483,391 - -1.2 2,483,433 + -2.4 2,483,433 + -0.2 2,483,433 + +1.2 2,483,655 + RR42_RS31660 0.23 +0.3 2,483,752 - RR42_RS31660 0.30 +0.1 2,483,816 + RR42_RS31660 0.35 -0.2 2,483,816 + RR42_RS31660 0.35 +1.4 2,483,883 + RR42_RS31660 0.40 +0.2 2,483,884 - RR42_RS31660 0.40 +1.0 2,483,887 + RR42_RS31660 0.40 +0.7 2,483,887 + RR42_RS31660 0.40 +0.0 2,483,945 - RR42_RS31660 0.44 -0.2 2,484,060 - RR42_RS31660 0.53 +0.2 2,484,127 - RR42_RS31660 0.58 -1.1 2,484,127 - RR42_RS31660 0.58 -0.5 2,484,153 + RR42_RS31660 0.59 +0.8 2,484,154 - RR42_RS31660 0.60 +0.5
Or see this region's nucleotide sequence