Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_RNA77 and Psyr_4918 are separated by 580 nucleotides
Psyr_RNA77: Psyr_RNA77 - tRNA-Thr, at 5,830,736 to 5,830,811
_RNA77
Psyr_4918: Psyr_4918 - hypothetical protein, at 5,831,392 to 5,831,862
_4918
Position (kb) 5831
5832 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5 at 5830.532 kb on + strand at 5830.532 kb on + strand at 5830.532 kb on + strand at 5830.533 kb on - strand at 5830.533 kb on - strand at 5830.533 kb on - strand at 5830.533 kb on - strand at 5830.533 kb on - strand at 5830.533 kb on - strand at 5830.812 kb on + strand at 5830.812 kb on + strand at 5830.814 kb on + strand at 5830.814 kb on + strand at 5830.814 kb on + strand at 5830.815 kb on - strand at 5830.815 kb on - strand at 5830.815 kb on - strand at 5830.858 kb on - strand at 5830.863 kb on + strand at 5830.912 kb on - strand at 5831.028 kb on - strand at 5831.033 kb on + strand at 5831.034 kb on - strand at 5831.034 kb on - strand at 5831.036 kb on + strand at 5831.037 kb on - strand at 5831.037 kb on - strand at 5831.067 kb on + strand at 5831.068 kb on - strand at 5831.068 kb on - strand at 5831.128 kb on + strand at 5831.129 kb on - strand at 5831.131 kb on + strand at 5831.131 kb on + strand at 5831.132 kb on - strand at 5831.146 kb on + strand at 5831.146 kb on + strand at 5831.149 kb on + strand at 5831.150 kb on - strand at 5831.150 kb on - strand at 5831.150 kb on - strand at 5831.153 kb on + strand at 5831.153 kb on + strand at 5831.153 kb on + strand at 5831.153 kb on + strand at 5831.153 kb on + strand at 5831.154 kb on - strand at 5831.162 kb on + strand at 5831.163 kb on - strand at 5831.195 kb on - strand at 5831.195 kb on - strand at 5831.206 kb on + strand at 5831.207 kb on - strand at 5831.207 kb on - strand at 5831.207 kb on - strand at 5831.208 kb on + strand at 5831.208 kb on + strand at 5831.208 kb on + strand at 5831.208 kb on + strand at 5831.208 kb on + strand at 5831.208 kb on + strand at 5831.209 kb on - strand at 5831.209 kb on - strand at 5831.209 kb on - strand at 5831.209 kb on - strand at 5831.209 kb on - strand at 5831.209 kb on - strand at 5831.209 kb on - strand at 5831.209 kb on - strand at 5831.209 kb on - strand at 5831.209 kb on - strand at 5831.209 kb on - strand at 5831.212 kb on + strand at 5831.213 kb on - strand at 5831.213 kb on - strand at 5831.213 kb on - strand at 5831.233 kb on + strand at 5831.233 kb on + strand at 5831.233 kb on + strand at 5831.233 kb on + strand at 5831.233 kb on + strand at 5831.234 kb on - strand at 5831.234 kb on - strand at 5831.234 kb on - strand at 5831.234 kb on - strand at 5831.235 kb on + strand at 5831.235 kb on + strand at 5831.235 kb on + strand at 5831.235 kb on + strand at 5831.235 kb on + strand at 5831.285 kb on + strand at 5831.285 kb on + strand at 5831.285 kb on + strand at 5831.285 kb on + strand at 5831.285 kb on + strand at 5831.286 kb on - strand at 5831.286 kb on - strand at 5831.286 kb on - strand at 5831.286 kb on - strand at 5831.289 kb on + strand at 5831.290 kb on - strand at 5831.290 kb on - strand at 5831.290 kb on - strand at 5831.290 kb on - strand at 5831.380 kb on + strand at 5831.381 kb on - strand at 5831.405 kb on + strand at 5831.405 kb on + strand at 5831.405 kb on + strand at 5831.405 kb on + strand at 5831.405 kb on + strand at 5831.405 kb on + strand at 5831.406 kb on - strand at 5831.406 kb on - strand at 5831.406 kb on - strand at 5831.406 kb on - strand at 5831.500 kb on + strand, within Psyr_4918 at 5831.500 kb on + strand, within Psyr_4918 at 5831.500 kb on + strand, within Psyr_4918 at 5831.500 kb on + strand, within Psyr_4918 at 5831.500 kb on + strand, within Psyr_4918 at 5831.500 kb on + strand, within Psyr_4918 at 5831.500 kb on + strand, within Psyr_4918 at 5831.501 kb on - strand, within Psyr_4918 at 5831.501 kb on - strand, within Psyr_4918 at 5831.501 kb on - strand, within Psyr_4918 at 5831.501 kb on - strand, within Psyr_4918 at 5831.501 kb on - strand, within Psyr_4918 at 5831.501 kb on - strand, within Psyr_4918 at 5831.501 kb on - strand, within Psyr_4918 at 5831.501 kb on - strand, within Psyr_4918 at 5831.501 kb on - strand, within Psyr_4918 at 5831.501 kb on - strand, within Psyr_4918 at 5831.622 kb on - strand, within Psyr_4918 at 5831.644 kb on + strand, within Psyr_4918 at 5831.644 kb on + strand, within Psyr_4918 at 5831.644 kb on + strand, within Psyr_4918 at 5831.644 kb on + strand, within Psyr_4918 at 5831.644 kb on + strand, within Psyr_4918 at 5831.645 kb on - strand, within Psyr_4918 at 5831.645 kb on - strand, within Psyr_4918 at 5831.645 kb on - strand, within Psyr_4918 at 5831.645 kb on - strand, within Psyr_4918 at 5831.645 kb on - strand, within Psyr_4918 at 5831.645 kb on - strand, within Psyr_4918 at 5831.645 kb on - strand, within Psyr_4918 at 5831.730 kb on - strand, within Psyr_4918 at 5831.817 kb on - strand at 5831.838 kb on + strand at 5831.838 kb on + strand at 5831.838 kb on + strand at 5831.839 kb on - strand at 5831.839 kb on - strand at 5831.839 kb on - strand at 5831.860 kb on + strand at 5831.860 kb on + strand at 5831.860 kb on + strand at 5831.869 kb on - strand at 5831.895 kb on + strand at 5831.895 kb on + strand at 5831.944 kb on + strand at 5831.944 kb on + strand at 5832.232 kb on + strand at 5832.232 kb on + strand at 5832.233 kb on - strand at 5832.233 kb on - strand at 5832.233 kb on - strand at 5832.233 kb on - strand at 5832.257 kb on - strand at 5832.267 kb on + strand at 5832.346 kb on + strand at 5832.346 kb on + strand at 5832.346 kb on + strand at 5832.346 kb on + strand at 5832.346 kb on + strand at 5832.346 kb on + strand at 5832.346 kb on + strand at 5832.347 kb on - strand at 5832.347 kb on - strand at 5832.347 kb on - strand at 5832.353 kb on + strand at 5832.353 kb on + strand at 5832.353 kb on + strand at 5832.353 kb on + strand at 5832.353 kb on + strand at 5832.354 kb on - strand at 5832.354 kb on - strand at 5832.354 kb on - strand at 5832.354 kb on - strand at 5832.354 kb on - strand at 5832.354 kb on - strand at 5832.359 kb on + strand at 5832.359 kb on + strand at 5832.359 kb on + strand at 5832.359 kb on + strand at 5832.359 kb on + strand at 5832.359 kb on + strand at 5832.359 kb on + strand at 5832.359 kb on + strand at 5832.359 kb on + strand at 5832.359 kb on + strand at 5832.359 kb on + strand at 5832.359 kb on + strand at 5832.359 kb on + strand at 5832.359 kb on + strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.360 kb on - strand at 5832.365 kb on + strand at 5832.365 kb on + strand at 5832.365 kb on + strand at 5832.366 kb on - strand at 5832.369 kb on + strand at 5832.369 kb on + strand at 5832.369 kb on + strand at 5832.370 kb on - strand at 5832.370 kb on - strand at 5832.441 kb on - strand at 5832.441 kb on - strand at 5832.498 kb on + strand at 5832.498 kb on + strand at 5832.498 kb on + strand at 5832.498 kb on + strand at 5832.499 kb on - strand at 5832.499 kb on - strand at 5832.499 kb on - strand at 5832.499 kb on - strand at 5832.499 kb on - strand at 5832.499 kb on - strand at 5832.549 kb on + strand at 5832.549 kb on + strand at 5832.675 kb on + strand at 5832.683 kb on + strand at 5832.703 kb on + strand at 5832.714 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 5,830,532 + -1.5 5,830,532 + -0.1 5,830,532 + +2.1 5,830,533 - -0.3 5,830,533 - +1.7 5,830,533 - -1.2 5,830,533 - -1.0 5,830,533 - +1.2 5,830,533 - +1.8 5,830,812 + -0.1 5,830,812 + +3.1 5,830,814 + -1.6 5,830,814 + +0.6 5,830,814 + +0.1 5,830,815 - -4.7 5,830,815 - +3.1 5,830,815 - -3.3 5,830,858 - -1.0 5,830,863 + -1.2 5,830,912 - +4.5 5,831,028 - -1.5 5,831,033 + +0.9 5,831,034 - +2.7 5,831,034 - +2.7 5,831,036 + +2.4 5,831,037 - -1.9 5,831,037 - +1.1 5,831,067 + -2.0 5,831,068 - -2.0 5,831,068 - -1.5 5,831,128 + -3.5 5,831,129 - -1.9 5,831,131 + -2.3 5,831,131 + -3.1 5,831,132 - +1.1 5,831,146 + -2.9 5,831,146 + -4.7 5,831,149 + -5.4 5,831,150 - -0.8 5,831,150 - +3.1 5,831,150 - +0.7 5,831,153 + +1.1 5,831,153 + +1.1 5,831,153 + +0.1 5,831,153 + -2.7 5,831,153 + -1.8 5,831,154 - +1.7 5,831,162 + -3.0 5,831,163 - -5.1 5,831,195 - +0.1 5,831,195 - +0.1 5,831,206 + -0.9 5,831,207 - +2.7 5,831,207 - +0.1 5,831,207 - -2.6 5,831,208 + +2.1 5,831,208 + +0.1 5,831,208 + -2.0 5,831,208 + +0.1 5,831,208 + +1.1 5,831,208 + -2.1 5,831,209 - -5.5 5,831,209 - -2.5 5,831,209 - -1.5 5,831,209 - -2.4 5,831,209 - -0.7 5,831,209 - -2.6 5,831,209 - +2.1 5,831,209 - -4.0 5,831,209 - -0.8 5,831,209 - +0.1 5,831,209 - +0.1 5,831,212 + -3.7 5,831,213 - -0.4 5,831,213 - -1.4 5,831,213 - +0.1 5,831,233 + -1.3 5,831,233 + -2.2 5,831,233 + +2.1 5,831,233 + +0.1 5,831,233 + +1.1 5,831,234 - +2.9 5,831,234 - +0.1 5,831,234 - -2.3 5,831,234 - -1.9 5,831,235 + +3.2 5,831,235 + -0.9 5,831,235 + -5.0 5,831,235 + +2.9 5,831,235 + +0.1 5,831,285 + +0.2 5,831,285 + +3.8 5,831,285 + +2.4 5,831,285 + -1.2 5,831,285 + +0.7 5,831,286 - -3.6 5,831,286 - -0.8 5,831,286 - +0.1 5,831,286 - -1.2 5,831,289 + +1.7 5,831,290 - +0.5 5,831,290 - +0.1 5,831,290 - +1.1 5,831,290 - +0.1 5,831,380 + +2.9 5,831,381 - +3.2 5,831,405 + -3.3 5,831,405 + -3.5 5,831,405 + +1.7 5,831,405 + -4.5 5,831,405 + +2.1 5,831,405 + -0.9 5,831,406 - -0.4 5,831,406 - -1.9 5,831,406 - -2.9 5,831,406 - +4.2 5,831,500 + Psyr_4918 0.23 +0.1 5,831,500 + Psyr_4918 0.23 -2.7 5,831,500 + Psyr_4918 0.23 -3.1 5,831,500 + Psyr_4918 0.23 +3.2 5,831,500 + Psyr_4918 0.23 -4.4 5,831,500 + Psyr_4918 0.23 -1.9 5,831,500 + Psyr_4918 0.23 -2.6 5,831,501 - Psyr_4918 0.23 -1.9 5,831,501 - Psyr_4918 0.23 -1.2 5,831,501 - Psyr_4918 0.23 +0.3 5,831,501 - Psyr_4918 0.23 -0.4 5,831,501 - Psyr_4918 0.23 -4.4 5,831,501 - Psyr_4918 0.23 -0.4 5,831,501 - Psyr_4918 0.23 -2.6 5,831,501 - Psyr_4918 0.23 +2.4 5,831,501 - Psyr_4918 0.23 +4.9 5,831,501 - Psyr_4918 0.23 +0.1 5,831,622 - Psyr_4918 0.49 -2.2 5,831,644 + Psyr_4918 0.54 +1.1 5,831,644 + Psyr_4918 0.54 -3.1 5,831,644 + Psyr_4918 0.54 -2.8 5,831,644 + Psyr_4918 0.54 -1.5 5,831,644 + Psyr_4918 0.54 +3.1 5,831,645 - Psyr_4918 0.54 +2.4 5,831,645 - Psyr_4918 0.54 -1.1 5,831,645 - Psyr_4918 0.54 +0.9 5,831,645 - Psyr_4918 0.54 +1.1 5,831,645 - Psyr_4918 0.54 -1.2 5,831,645 - Psyr_4918 0.54 +2.9 5,831,645 - Psyr_4918 0.54 +2.4 5,831,730 - Psyr_4918 0.72 -1.2 5,831,817 - +4.0 5,831,838 + +3.4 5,831,838 + -1.1 5,831,838 + -1.9 5,831,839 - +2.1 5,831,839 - +2.4 5,831,839 - -0.5 5,831,860 + -3.0 5,831,860 + +2.1 5,831,860 + -1.0 5,831,869 - +2.9 5,831,895 + +2.1 5,831,895 + -2.8 5,831,944 + -0.3 5,831,944 + -0.7 5,832,232 + -2.0 5,832,232 + -0.7 5,832,233 - +4.2 5,832,233 - +0.1 5,832,233 - -2.4 5,832,233 - +0.1 5,832,257 - +1.4 5,832,267 + -5.0 5,832,346 + -0.3 5,832,346 + +2.1 5,832,346 + +0.1 5,832,346 + +1.5 5,832,346 + -1.1 5,832,346 + -1.3 5,832,346 + +0.1 5,832,347 - -1.4 5,832,347 - +3.4 5,832,347 - -0.8 5,832,353 + +0.3 5,832,353 + -2.4 5,832,353 + -3.6 5,832,353 + +1.6 5,832,353 + -1.9 5,832,354 - -1.6 5,832,354 - +0.1 5,832,354 - +0.1 5,832,354 - +3.1 5,832,354 - +1.7 5,832,354 - +1.2 5,832,359 + -0.9 5,832,359 + +4.2 5,832,359 + +0.1 5,832,359 + +0.1 5,832,359 + +2.1 5,832,359 + -0.7 5,832,359 + -1.3 5,832,359 + +0.1 5,832,359 + -1.4 5,832,359 + -0.6 5,832,359 + -5.1 5,832,359 + +4.2 5,832,359 + +2.7 5,832,359 + +1.6 5,832,360 - +2.1 5,832,360 - -0.7 5,832,360 - -2.5 5,832,360 - -0.9 5,832,360 - -2.7 5,832,360 - -3.3 5,832,360 - -1.9 5,832,360 - +3.2 5,832,360 - -5.1 5,832,360 - -0.3 5,832,360 - -2.5 5,832,360 - +2.7 5,832,360 - -1.3 5,832,360 - +2.1 5,832,360 - -3.2 5,832,360 - +0.1 5,832,360 - -4.1 5,832,365 + -5.2 5,832,365 + -0.9 5,832,365 + -2.1 5,832,366 - +3.7 5,832,369 + -1.3 5,832,369 + +2.1 5,832,369 + +1.1 5,832,370 - -3.0 5,832,370 - +0.1 5,832,441 - +1.7 5,832,441 - -1.3 5,832,498 + -1.8 5,832,498 + -0.5 5,832,498 + -3.5 5,832,498 + -0.5 5,832,499 - -2.4 5,832,499 - -1.3 5,832,499 - +3.2 5,832,499 - -1.4 5,832,499 - +0.1 5,832,499 - +3.1 5,832,549 + -3.5 5,832,549 + +3.2 5,832,675 + -3.8 5,832,683 + -1.5 5,832,703 + -1.9 5,832,714 - +1.7
Or see this region's nucleotide sequence