Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4911 and Psyr_4912 are separated by 13 nucleotides Psyr_4912 and Psyr_4913 are separated by 66 nucleotides Psyr_4913 and Psyr_4914 overlap by 4 nucleotides Psyr_4914 and Psyr_4915 are separated by 1 nucleotides
Psyr_4911: Psyr_4911 - amino acid ABC transporter ATP-binding protein, PAAT family, at 5,823,615 to 5,824,388
_4911
Psyr_4912: Psyr_4912 - amino acid ABC transporter substrate-binding protein, PAAT family, at 5,824,402 to 5,825,166
_4912
Psyr_4913: Psyr_4913 - amino acid ABC transporter membrane protein 1, PAAT family, at 5,825,233 to 5,825,928
_4913
Psyr_4914: Psyr_4914 - amino acid ABC transporter membrane protein 2, PAAT family, at 5,825,925 to 5,826,614
_4914
Psyr_4915: Psyr_4915 - conserved hypothetical protein, at 5,826,616 to 5,827,887
_4915
Position (kb) 5825
5826 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 5824.270 kb on + strand, within Psyr_4911 at 5824.271 kb on - strand, within Psyr_4911 at 5824.271 kb on - strand, within Psyr_4911 at 5824.333 kb on + strand at 5824.333 kb on + strand at 5824.334 kb on - strand at 5824.334 kb on - strand at 5824.334 kb on - strand at 5824.334 kb on - strand at 5824.334 kb on - strand at 5824.541 kb on + strand, within Psyr_4912 at 5824.552 kb on + strand, within Psyr_4912 at 5824.721 kb on - strand, within Psyr_4912 at 5824.723 kb on + strand, within Psyr_4912 at 5824.724 kb on - strand, within Psyr_4912 at 5824.888 kb on + strand, within Psyr_4912 at 5824.888 kb on + strand, within Psyr_4912 at 5824.888 kb on + strand, within Psyr_4912 at 5824.888 kb on + strand, within Psyr_4912 at 5824.889 kb on - strand, within Psyr_4912 at 5824.889 kb on - strand, within Psyr_4912 at 5824.957 kb on + strand, within Psyr_4912 at 5824.957 kb on + strand, within Psyr_4912 at 5824.957 kb on + strand, within Psyr_4912 at 5824.957 kb on + strand, within Psyr_4912 at 5824.957 kb on + strand, within Psyr_4912 at 5824.957 kb on + strand, within Psyr_4912 at 5824.957 kb on + strand, within Psyr_4912 at 5824.957 kb on + strand, within Psyr_4912 at 5824.957 kb on + strand, within Psyr_4912 at 5824.957 kb on + strand, within Psyr_4912 at 5824.957 kb on + strand, within Psyr_4912 at 5824.957 kb on + strand, within Psyr_4912 at 5824.958 kb on - strand, within Psyr_4912 at 5824.958 kb on - strand, within Psyr_4912 at 5824.958 kb on - strand, within Psyr_4912 at 5824.958 kb on - strand, within Psyr_4912 at 5825.122 kb on + strand at 5825.122 kb on + strand at 5825.122 kb on + strand at 5825.122 kb on + strand at 5825.123 kb on - strand at 5825.123 kb on - strand at 5825.123 kb on - strand at 5825.123 kb on - strand at 5825.123 kb on - strand at 5825.123 kb on - strand at 5825.123 kb on - strand at 5825.123 kb on - strand at 5825.123 kb on - strand at 5825.123 kb on - strand at 5825.123 kb on - strand at 5825.143 kb on + strand at 5825.143 kb on + strand at 5825.143 kb on + strand at 5825.143 kb on + strand at 5825.143 kb on + strand at 5825.143 kb on + strand at 5825.143 kb on + strand at 5825.143 kb on + strand at 5825.144 kb on - strand at 5825.144 kb on - strand at 5825.144 kb on - strand at 5825.144 kb on - strand at 5825.144 kb on - strand at 5825.392 kb on - strand, within Psyr_4913 at 5825.392 kb on - strand, within Psyr_4913 at 5825.395 kb on + strand, within Psyr_4913 at 5825.395 kb on + strand, within Psyr_4913 at 5825.395 kb on + strand, within Psyr_4913 at 5825.395 kb on + strand, within Psyr_4913 at 5825.395 kb on + strand, within Psyr_4913 at 5825.396 kb on - strand, within Psyr_4913 at 5825.396 kb on - strand, within Psyr_4913 at 5825.396 kb on - strand, within Psyr_4913 at 5825.446 kb on + strand, within Psyr_4913 at 5825.446 kb on + strand, within Psyr_4913 at 5825.446 kb on + strand, within Psyr_4913 at 5825.821 kb on + strand, within Psyr_4913 at 5825.821 kb on + strand, within Psyr_4913 at 5825.821 kb on + strand, within Psyr_4913 at 5825.821 kb on + strand, within Psyr_4913 at 5825.821 kb on + strand, within Psyr_4913 at 5825.821 kb on + strand, within Psyr_4913 at 5825.821 kb on + strand, within Psyr_4913 at 5825.821 kb on + strand, within Psyr_4913 at 5825.822 kb on - strand, within Psyr_4913 at 5825.822 kb on - strand, within Psyr_4913 at 5825.822 kb on - strand, within Psyr_4913 at 5825.822 kb on - strand, within Psyr_4913 at 5825.822 kb on - strand, within Psyr_4913 at 5825.822 kb on - strand, within Psyr_4913 at 5825.822 kb on - strand, within Psyr_4913 at 5825.822 kb on - strand, within Psyr_4913 at 5825.822 kb on - strand, within Psyr_4913 at 5825.822 kb on - strand, within Psyr_4913 at 5825.822 kb on - strand, within Psyr_4913 at 5825.822 kb on - strand, within Psyr_4913 at 5825.842 kb on + strand, within Psyr_4913 at 5825.842 kb on + strand, within Psyr_4913 at 5825.842 kb on + strand, within Psyr_4913 at 5825.842 kb on + strand, within Psyr_4913 at 5825.842 kb on + strand, within Psyr_4913 at 5825.842 kb on + strand, within Psyr_4913 at 5825.842 kb on + strand, within Psyr_4913 at 5825.843 kb on - strand, within Psyr_4913 at 5825.843 kb on - strand, within Psyr_4913 at 5825.843 kb on - strand, within Psyr_4913 at 5825.843 kb on - strand, within Psyr_4913 at 5825.878 kb on + strand at 5825.878 kb on + strand at 5825.878 kb on + strand at 5825.878 kb on + strand at 5825.878 kb on + strand at 5825.878 kb on + strand at 5825.878 kb on + strand at 5825.878 kb on + strand at 5825.878 kb on + strand at 5825.878 kb on + strand at 5825.878 kb on + strand at 5825.878 kb on + strand at 5825.878 kb on + strand at 5825.878 kb on + strand at 5825.879 kb on - strand at 5825.879 kb on - strand at 5825.879 kb on - strand at 5825.879 kb on - strand at 5825.879 kb on - strand at 5825.879 kb on - strand at 5825.879 kb on - strand at 5825.879 kb on - strand at 5825.879 kb on - strand at 5825.879 kb on - strand at 5825.879 kb on - strand at 5826.090 kb on + strand, within Psyr_4914 at 5826.090 kb on + strand, within Psyr_4914 at 5826.090 kb on + strand, within Psyr_4914 at 5826.090 kb on + strand, within Psyr_4914 at 5826.090 kb on + strand, within Psyr_4914 at 5826.090 kb on + strand, within Psyr_4914 at 5826.090 kb on + strand, within Psyr_4914 at 5826.091 kb on - strand, within Psyr_4914 at 5826.091 kb on - strand, within Psyr_4914 at 5826.091 kb on - strand, within Psyr_4914 at 5826.091 kb on - strand, within Psyr_4914 at 5826.091 kb on - strand, within Psyr_4914 at 5826.091 kb on - strand, within Psyr_4914 at 5826.091 kb on - strand, within Psyr_4914 at 5826.091 kb on - strand, within Psyr_4914 at 5826.091 kb on - strand, within Psyr_4914 at 5826.091 kb on - strand, within Psyr_4914 at 5826.091 kb on - strand, within Psyr_4914 at 5826.141 kb on + strand, within Psyr_4914 at 5826.142 kb on - strand, within Psyr_4914 at 5826.142 kb on - strand, within Psyr_4914 at 5826.142 kb on - strand, within Psyr_4914 at 5826.144 kb on + strand, within Psyr_4914 at 5826.249 kb on + strand, within Psyr_4914 at 5826.249 kb on + strand, within Psyr_4914 at 5826.249 kb on + strand, within Psyr_4914 at 5826.249 kb on + strand, within Psyr_4914 at 5826.249 kb on + strand, within Psyr_4914 at 5826.249 kb on + strand, within Psyr_4914 at 5826.249 kb on + strand, within Psyr_4914 at 5826.250 kb on - strand, within Psyr_4914 at 5826.250 kb on - strand, within Psyr_4914 at 5826.250 kb on - strand, within Psyr_4914 at 5826.250 kb on - strand, within Psyr_4914 at 5826.250 kb on - strand, within Psyr_4914 at 5826.348 kb on + strand, within Psyr_4914 at 5826.348 kb on + strand, within Psyr_4914 at 5826.348 kb on + strand, within Psyr_4914 at 5826.348 kb on + strand, within Psyr_4914 at 5826.348 kb on + strand, within Psyr_4914 at 5826.348 kb on + strand, within Psyr_4914 at 5826.348 kb on + strand, within Psyr_4914 at 5826.348 kb on + strand, within Psyr_4914 at 5826.348 kb on + strand, within Psyr_4914 at 5826.348 kb on + strand, within Psyr_4914 at 5826.348 kb on + strand, within Psyr_4914 at 5826.348 kb on + strand, within Psyr_4914 at 5826.348 kb on + strand, within Psyr_4914 at 5826.348 kb on + strand, within Psyr_4914 at 5826.349 kb on - strand, within Psyr_4914 at 5826.349 kb on - strand, within Psyr_4914 at 5826.349 kb on - strand, within Psyr_4914 at 5826.349 kb on - strand, within Psyr_4914 at 5826.349 kb on - strand, within Psyr_4914 at 5826.349 kb on - strand, within Psyr_4914 at 5826.349 kb on - strand, within Psyr_4914 at 5826.349 kb on - strand, within Psyr_4914 at 5826.349 kb on - strand, within Psyr_4914 at 5826.349 kb on - strand, within Psyr_4914 at 5826.349 kb on - strand, within Psyr_4914 at 5826.351 kb on - strand, within Psyr_4914 at 5826.390 kb on + strand, within Psyr_4914 at 5826.492 kb on + strand, within Psyr_4914 at 5826.492 kb on + strand, within Psyr_4914 at 5826.492 kb on + strand, within Psyr_4914 at 5826.493 kb on - strand, within Psyr_4914 at 5826.531 kb on + strand, within Psyr_4914 at 5826.531 kb on + strand, within Psyr_4914 at 5826.531 kb on + strand, within Psyr_4914 at 5826.531 kb on + strand, within Psyr_4914 at 5826.532 kb on - strand, within Psyr_4914 at 5826.583 kb on + strand at 5826.583 kb on + strand at 5826.584 kb on - strand at 5826.592 kb on + strand at 5826.592 kb on + strand at 5826.615 kb on + strand at 5826.616 kb on - strand at 5826.616 kb on - strand at 5826.656 kb on - strand at 5826.656 kb on - strand at 5826.656 kb on - strand at 5826.656 kb on - strand at 5826.805 kb on + strand, within Psyr_4915
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 5,824,270 + Psyr_4911 0.85 -0.1 5,824,271 - Psyr_4911 0.85 -0.1 5,824,271 - Psyr_4911 0.85 -0.2 5,824,333 + -0.6 5,824,333 + -0.5 5,824,334 - -2.5 5,824,334 - +2.4 5,824,334 - -1.1 5,824,334 - -0.9 5,824,334 - -2.7 5,824,541 + Psyr_4912 0.18 -1.5 5,824,552 + Psyr_4912 0.20 -0.6 5,824,721 - Psyr_4912 0.42 +0.1 5,824,723 + Psyr_4912 0.42 -0.8 5,824,724 - Psyr_4912 0.42 -1.1 5,824,888 + Psyr_4912 0.64 -0.4 5,824,888 + Psyr_4912 0.64 -0.1 5,824,888 + Psyr_4912 0.64 +0.3 5,824,888 + Psyr_4912 0.64 -1.4 5,824,889 - Psyr_4912 0.64 -3.9 5,824,889 - Psyr_4912 0.64 +0.1 5,824,957 + Psyr_4912 0.73 -1.1 5,824,957 + Psyr_4912 0.73 +1.7 5,824,957 + Psyr_4912 0.73 +3.4 5,824,957 + Psyr_4912 0.73 -1.6 5,824,957 + Psyr_4912 0.73 -2.6 5,824,957 + Psyr_4912 0.73 -3.0 5,824,957 + Psyr_4912 0.73 -0.3 5,824,957 + Psyr_4912 0.73 -1.3 5,824,957 + Psyr_4912 0.73 -0.7 5,824,957 + Psyr_4912 0.73 +3.8 5,824,957 + Psyr_4912 0.73 -0.9 5,824,957 + Psyr_4912 0.73 +0.6 5,824,958 - Psyr_4912 0.73 -3.9 5,824,958 - Psyr_4912 0.73 -4.7 5,824,958 - Psyr_4912 0.73 -3.5 5,824,958 - Psyr_4912 0.73 -0.7 5,825,122 + -0.2 5,825,122 + -4.8 5,825,122 + -0.8 5,825,122 + +2.1 5,825,123 - -0.6 5,825,123 - -1.9 5,825,123 - -1.9 5,825,123 - +2.7 5,825,123 - -3.1 5,825,123 - +1.3 5,825,123 - -1.5 5,825,123 - -1.2 5,825,123 - +0.8 5,825,123 - +0.9 5,825,123 - +1.7 5,825,143 + +0.3 5,825,143 + +0.4 5,825,143 + +4.5 5,825,143 + +4.2 5,825,143 + -2.7 5,825,143 + -0.1 5,825,143 + -0.1 5,825,143 + -0.1 5,825,144 - -3.1 5,825,144 - -1.6 5,825,144 - -2.6 5,825,144 - +0.4 5,825,144 - -0.4 5,825,392 - Psyr_4913 0.23 +1.2 5,825,392 - Psyr_4913 0.23 +0.1 5,825,395 + Psyr_4913 0.23 +2.1 5,825,395 + Psyr_4913 0.23 -1.1 5,825,395 + Psyr_4913 0.23 -1.8 5,825,395 + Psyr_4913 0.23 -3.8 5,825,395 + Psyr_4913 0.23 -1.3 5,825,396 - Psyr_4913 0.23 +1.0 5,825,396 - Psyr_4913 0.23 -5.1 5,825,396 - Psyr_4913 0.23 +3.7 5,825,446 + Psyr_4913 0.31 +0.1 5,825,446 + Psyr_4913 0.31 +4.1 5,825,446 + Psyr_4913 0.31 -1.2 5,825,821 + Psyr_4913 0.84 +1.0 5,825,821 + Psyr_4913 0.84 -0.6 5,825,821 + Psyr_4913 0.84 +4.1 5,825,821 + Psyr_4913 0.84 -1.0 5,825,821 + Psyr_4913 0.84 -1.2 5,825,821 + Psyr_4913 0.84 -0.7 5,825,821 + Psyr_4913 0.84 +2.7 5,825,821 + Psyr_4913 0.84 +2.7 5,825,822 - Psyr_4913 0.85 -0.4 5,825,822 - Psyr_4913 0.85 -2.4 5,825,822 - Psyr_4913 0.85 +0.2 5,825,822 - Psyr_4913 0.85 +3.0 5,825,822 - Psyr_4913 0.85 -0.1 5,825,822 - Psyr_4913 0.85 -0.3 5,825,822 - Psyr_4913 0.85 +2.4 5,825,822 - Psyr_4913 0.85 -0.8 5,825,822 - Psyr_4913 0.85 -2.6 5,825,822 - Psyr_4913 0.85 +3.8 5,825,822 - Psyr_4913 0.85 +1.7 5,825,822 - Psyr_4913 0.85 -0.2 5,825,842 + Psyr_4913 0.88 -0.2 5,825,842 + Psyr_4913 0.88 +4.0 5,825,842 + Psyr_4913 0.88 +0.0 5,825,842 + Psyr_4913 0.88 -0.6 5,825,842 + Psyr_4913 0.88 +2.4 5,825,842 + Psyr_4913 0.88 +3.2 5,825,842 + Psyr_4913 0.88 -2.2 5,825,843 - Psyr_4913 0.88 -1.0 5,825,843 - Psyr_4913 0.88 +2.1 5,825,843 - Psyr_4913 0.88 +2.4 5,825,843 - Psyr_4913 0.88 +1.1 5,825,878 + +2.9 5,825,878 + +0.7 5,825,878 + -0.1 5,825,878 + -1.5 5,825,878 + -1.5 5,825,878 + +3.1 5,825,878 + -2.7 5,825,878 + +0.1 5,825,878 + +2.7 5,825,878 + -0.1 5,825,878 + +0.7 5,825,878 + -0.1 5,825,878 + +0.3 5,825,878 + +3.9 5,825,879 - +0.1 5,825,879 - -0.5 5,825,879 - +2.7 5,825,879 - -1.8 5,825,879 - -1.4 5,825,879 - -3.1 5,825,879 - +0.1 5,825,879 - +1.8 5,825,879 - -1.6 5,825,879 - -0.3 5,825,879 - -0.9 5,826,090 + Psyr_4914 0.24 +0.1 5,826,090 + Psyr_4914 0.24 +1.8 5,826,090 + Psyr_4914 0.24 +0.1 5,826,090 + Psyr_4914 0.24 -0.8 5,826,090 + Psyr_4914 0.24 -2.4 5,826,090 + Psyr_4914 0.24 -5.0 5,826,090 + Psyr_4914 0.24 -0.6 5,826,091 - Psyr_4914 0.24 +0.2 5,826,091 - Psyr_4914 0.24 +1.1 5,826,091 - Psyr_4914 0.24 -1.6 5,826,091 - Psyr_4914 0.24 +0.1 5,826,091 - Psyr_4914 0.24 +0.2 5,826,091 - Psyr_4914 0.24 -0.6 5,826,091 - Psyr_4914 0.24 +3.2 5,826,091 - Psyr_4914 0.24 -1.6 5,826,091 - Psyr_4914 0.24 -1.5 5,826,091 - Psyr_4914 0.24 -1.8 5,826,091 - Psyr_4914 0.24 +0.1 5,826,141 + Psyr_4914 0.31 +0.0 5,826,142 - Psyr_4914 0.31 -1.1 5,826,142 - Psyr_4914 0.31 -0.2 5,826,142 - Psyr_4914 0.31 -3.2 5,826,144 + Psyr_4914 0.32 +3.5 5,826,249 + Psyr_4914 0.47 +0.9 5,826,249 + Psyr_4914 0.47 +1.7 5,826,249 + Psyr_4914 0.47 +3.2 5,826,249 + Psyr_4914 0.47 -1.7 5,826,249 + Psyr_4914 0.47 +0.5 5,826,249 + Psyr_4914 0.47 +1.7 5,826,249 + Psyr_4914 0.47 +0.1 5,826,250 - Psyr_4914 0.47 -2.3 5,826,250 - Psyr_4914 0.47 +0.1 5,826,250 - Psyr_4914 0.47 -3.9 5,826,250 - Psyr_4914 0.47 +0.6 5,826,250 - Psyr_4914 0.47 -1.7 5,826,348 + Psyr_4914 0.61 +3.4 5,826,348 + Psyr_4914 0.61 +2.7 5,826,348 + Psyr_4914 0.61 -0.9 5,826,348 + Psyr_4914 0.61 -0.9 5,826,348 + Psyr_4914 0.61 +1.7 5,826,348 + Psyr_4914 0.61 +0.0 5,826,348 + Psyr_4914 0.61 +3.2 5,826,348 + Psyr_4914 0.61 +0.4 5,826,348 + Psyr_4914 0.61 -1.3 5,826,348 + Psyr_4914 0.61 -0.9 5,826,348 + Psyr_4914 0.61 +1.7 5,826,348 + Psyr_4914 0.61 -3.2 5,826,348 + Psyr_4914 0.61 -0.5 5,826,348 + Psyr_4914 0.61 +3.7 5,826,349 - Psyr_4914 0.61 -2.3 5,826,349 - Psyr_4914 0.61 -0.7 5,826,349 - Psyr_4914 0.61 -0.9 5,826,349 - Psyr_4914 0.61 -3.6 5,826,349 - Psyr_4914 0.61 -0.5 5,826,349 - Psyr_4914 0.61 +0.1 5,826,349 - Psyr_4914 0.61 +1.1 5,826,349 - Psyr_4914 0.61 -0.8 5,826,349 - Psyr_4914 0.61 +0.6 5,826,349 - Psyr_4914 0.61 -0.2 5,826,349 - Psyr_4914 0.61 -0.5 5,826,351 - Psyr_4914 0.62 -1.1 5,826,390 + Psyr_4914 0.67 -5.1 5,826,492 + Psyr_4914 0.82 -1.6 5,826,492 + Psyr_4914 0.82 -1.3 5,826,492 + Psyr_4914 0.82 +1.4 5,826,493 - Psyr_4914 0.82 -0.5 5,826,531 + Psyr_4914 0.88 -0.1 5,826,531 + Psyr_4914 0.88 +2.4 5,826,531 + Psyr_4914 0.88 -0.8 5,826,531 + Psyr_4914 0.88 -0.6 5,826,532 - Psyr_4914 0.88 +1.5 5,826,583 + -0.1 5,826,583 + +0.1 5,826,584 - +1.7 5,826,592 + -0.8 5,826,592 + -1.6 5,826,615 + +0.1 5,826,616 - +2.7 5,826,616 - +1.3 5,826,656 - -0.9 5,826,656 - -2.9 5,826,656 - -0.2 5,826,656 - -1.0 5,826,805 + Psyr_4915 0.15 +0.5
Or see this region's nucleotide sequence