Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4854 and Psyr_4855 are separated by 75 nucleotides Psyr_4855 and Psyr_4856 are separated by 51 nucleotides Psyr_4856 and Psyr_4857 overlap by 4 nucleotides
Psyr_4854: Psyr_4854 - 2OG-Fe(II) oxygenase superfamily, at 5,761,281 to 5,761,982
_4854
Psyr_4855: Psyr_4855 - conserved hypothetical protein, at 5,762,058 to 5,762,816
_4855
Psyr_4856: Psyr_4856 - conserved hypothetical protein, at 5,762,868 to 5,763,059
_4856
Psyr_4857: Psyr_4857 - conserved hypothetical protein, at 5,763,056 to 5,763,997
_4857
Position (kb) 5762
5763
5764 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 5761.900 kb on - strand, within Psyr_4854 at 5761.916 kb on + strand at 5761.916 kb on + strand at 5761.916 kb on + strand at 5761.916 kb on + strand at 5761.916 kb on + strand at 5761.916 kb on + strand at 5761.916 kb on + strand at 5761.917 kb on - strand at 5761.917 kb on - strand at 5761.917 kb on - strand at 5761.917 kb on - strand at 5761.917 kb on - strand at 5761.917 kb on - strand at 5761.917 kb on - strand at 5761.917 kb on - strand at 5761.919 kb on + strand at 5761.919 kb on + strand at 5761.920 kb on - strand at 5761.925 kb on + strand at 5761.926 kb on - strand at 5761.950 kb on + strand at 5761.950 kb on + strand at 5761.950 kb on + strand at 5761.951 kb on - strand at 5761.952 kb on + strand at 5761.952 kb on + strand at 5761.952 kb on + strand at 5761.952 kb on + strand at 5761.952 kb on + strand at 5761.952 kb on + strand at 5761.952 kb on + strand at 5761.953 kb on - strand at 5761.953 kb on - strand at 5761.953 kb on - strand at 5761.953 kb on - strand at 5761.953 kb on - strand at 5761.953 kb on - strand at 5761.953 kb on - strand at 5761.953 kb on - strand at 5761.999 kb on + strand at 5761.999 kb on + strand at 5761.999 kb on + strand at 5761.999 kb on + strand at 5762.000 kb on - strand at 5762.000 kb on - strand at 5762.118 kb on + strand at 5762.118 kb on + strand at 5762.118 kb on + strand at 5762.118 kb on + strand at 5762.118 kb on + strand at 5762.130 kb on + strand at 5762.130 kb on + strand at 5762.130 kb on + strand at 5762.130 kb on + strand at 5762.131 kb on - strand at 5762.131 kb on - strand at 5762.131 kb on - strand at 5762.131 kb on - strand at 5762.131 kb on - strand at 5762.131 kb on - strand at 5762.131 kb on - strand at 5762.200 kb on - strand, within Psyr_4855 at 5762.226 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.662 kb on - strand, within Psyr_4855 at 5762.662 kb on - strand, within Psyr_4855 at 5762.662 kb on - strand, within Psyr_4855 at 5762.662 kb on - strand, within Psyr_4855 at 5762.662 kb on - strand, within Psyr_4855 at 5762.736 kb on + strand, within Psyr_4855 at 5762.736 kb on + strand, within Psyr_4855 at 5762.740 kb on - strand, within Psyr_4855 at 5762.815 kb on - strand at 5762.815 kb on - strand at 5762.867 kb on + strand at 5762.867 kb on + strand at 5762.867 kb on + strand at 5762.867 kb on + strand at 5762.867 kb on + strand at 5762.868 kb on - strand at 5762.905 kb on + strand, within Psyr_4856 at 5762.905 kb on + strand, within Psyr_4856 at 5762.905 kb on + strand, within Psyr_4856 at 5762.906 kb on - strand, within Psyr_4856 at 5762.906 kb on - strand, within Psyr_4856 at 5762.906 kb on - strand, within Psyr_4856 at 5763.022 kb on + strand, within Psyr_4856 at 5763.023 kb on - strand, within Psyr_4856 at 5763.058 kb on - strand at 5763.423 kb on + strand, within Psyr_4857 at 5763.423 kb on + strand, within Psyr_4857 at 5763.424 kb on - strand, within Psyr_4857 at 5763.424 kb on - strand, within Psyr_4857 at 5763.424 kb on - strand, within Psyr_4857 at 5763.741 kb on + strand, within Psyr_4857 at 5763.759 kb on + strand, within Psyr_4857 at 5763.759 kb on + strand, within Psyr_4857 at 5763.759 kb on + strand, within Psyr_4857 at 5763.759 kb on + strand, within Psyr_4857 at 5763.759 kb on + strand, within Psyr_4857 at 5763.759 kb on + strand, within Psyr_4857 at 5763.760 kb on - strand, within Psyr_4857 at 5763.760 kb on - strand, within Psyr_4857 at 5763.809 kb on + strand, within Psyr_4857 at 5763.809 kb on + strand, within Psyr_4857 at 5763.809 kb on + strand, within Psyr_4857 at 5763.809 kb on + strand, within Psyr_4857 at 5763.809 kb on + strand, within Psyr_4857 at 5763.810 kb on - strand, within Psyr_4857 at 5763.810 kb on - strand, within Psyr_4857 at 5763.810 kb on - strand, within Psyr_4857 at 5763.810 kb on - strand, within Psyr_4857 at 5763.864 kb on - strand, within Psyr_4857 at 5763.897 kb on + strand, within Psyr_4857 at 5763.909 kb on + strand at 5763.910 kb on - strand at 5764.037 kb on + strand at 5764.043 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 5,761,900 - Psyr_4854 0.88 +2.4 5,761,916 + -3.3 5,761,916 + +2.6 5,761,916 + -2.4 5,761,916 + -1.6 5,761,916 + -1.8 5,761,916 + -1.7 5,761,916 + +1.1 5,761,917 - +2.4 5,761,917 - -2.3 5,761,917 - -1.6 5,761,917 - -1.4 5,761,917 - -1.4 5,761,917 - +0.2 5,761,917 - -1.2 5,761,917 - +0.8 5,761,919 + -0.4 5,761,919 + -5.0 5,761,920 - +1.1 5,761,925 + -1.6 5,761,926 - +2.6 5,761,950 + -0.8 5,761,950 + +0.4 5,761,950 + -2.3 5,761,951 - +3.8 5,761,952 + +1.6 5,761,952 + -2.8 5,761,952 + +0.6 5,761,952 + +3.6 5,761,952 + +0.6 5,761,952 + -0.8 5,761,952 + +3.2 5,761,953 - +1.1 5,761,953 - +0.8 5,761,953 - +0.9 5,761,953 - +0.1 5,761,953 - -3.8 5,761,953 - +4.4 5,761,953 - -0.5 5,761,953 - -1.1 5,761,999 + -1.7 5,761,999 + -1.5 5,761,999 + -2.0 5,761,999 + -1.3 5,762,000 - +3.5 5,762,000 - -3.9 5,762,118 + +2.9 5,762,118 + -1.3 5,762,118 + -2.1 5,762,118 + -1.3 5,762,118 + +4.5 5,762,130 + -1.3 5,762,130 + -3.9 5,762,130 + +3.1 5,762,130 + -2.1 5,762,131 - -2.5 5,762,131 - -1.8 5,762,131 - -1.9 5,762,131 - +3.4 5,762,131 - +0.1 5,762,131 - -0.9 5,762,131 - -2.3 5,762,200 - Psyr_4855 0.19 +2.6 5,762,226 + Psyr_4855 0.22 +0.1 5,762,661 + Psyr_4855 0.79 +2.9 5,762,661 + Psyr_4855 0.79 -0.4 5,762,661 + Psyr_4855 0.79 +0.7 5,762,661 + Psyr_4855 0.79 -5.5 5,762,661 + Psyr_4855 0.79 +2.1 5,762,661 + Psyr_4855 0.79 +0.1 5,762,661 + Psyr_4855 0.79 -2.2 5,762,661 + Psyr_4855 0.79 -0.1 5,762,661 + Psyr_4855 0.79 +1.1 5,762,662 - Psyr_4855 0.80 +0.5 5,762,662 - Psyr_4855 0.80 +2.4 5,762,662 - Psyr_4855 0.80 +4.3 5,762,662 - Psyr_4855 0.80 +2.1 5,762,662 - Psyr_4855 0.80 -1.8 5,762,736 + Psyr_4855 0.89 +0.4 5,762,736 + Psyr_4855 0.89 -0.3 5,762,740 - Psyr_4855 0.90 -0.6 5,762,815 - -2.6 5,762,815 - +3.2 5,762,867 + +2.1 5,762,867 + +1.6 5,762,867 + -1.1 5,762,867 + -0.4 5,762,867 + -0.7 5,762,868 - -2.1 5,762,905 + Psyr_4856 0.19 -1.6 5,762,905 + Psyr_4856 0.19 -2.9 5,762,905 + Psyr_4856 0.19 -1.4 5,762,906 - Psyr_4856 0.20 -1.5 5,762,906 - Psyr_4856 0.20 -5.6 5,762,906 - Psyr_4856 0.20 -2.6 5,763,022 + Psyr_4856 0.80 -1.4 5,763,023 - Psyr_4856 0.81 -1.5 5,763,058 - -0.3 5,763,423 + Psyr_4857 0.39 -1.1 5,763,423 + Psyr_4857 0.39 +0.1 5,763,424 - Psyr_4857 0.39 -0.4 5,763,424 - Psyr_4857 0.39 +0.4 5,763,424 - Psyr_4857 0.39 -0.8 5,763,741 + Psyr_4857 0.73 +2.4 5,763,759 + Psyr_4857 0.75 +2.1 5,763,759 + Psyr_4857 0.75 -3.2 5,763,759 + Psyr_4857 0.75 +4.6 5,763,759 + Psyr_4857 0.75 -1.8 5,763,759 + Psyr_4857 0.75 -1.9 5,763,759 + Psyr_4857 0.75 +0.1 5,763,760 - Psyr_4857 0.75 -2.0 5,763,760 - Psyr_4857 0.75 -2.7 5,763,809 + Psyr_4857 0.80 -1.5 5,763,809 + Psyr_4857 0.80 -2.5 5,763,809 + Psyr_4857 0.80 -1.6 5,763,809 + Psyr_4857 0.80 +1.1 5,763,809 + Psyr_4857 0.80 -2.2 5,763,810 - Psyr_4857 0.80 -0.3 5,763,810 - Psyr_4857 0.80 -0.4 5,763,810 - Psyr_4857 0.80 +4.4 5,763,810 - Psyr_4857 0.80 +1.6 5,763,864 - Psyr_4857 0.86 -1.0 5,763,897 + Psyr_4857 0.89 -0.8 5,763,909 + -2.7 5,763,910 - -0.9 5,764,037 + -1.3 5,764,043 + +2.1
Or see this region's nucleotide sequence