Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4834 and Psyr_4835 are separated by 15 nucleotides Psyr_4835 and Psyr_4836 are separated by 11 nucleotides Psyr_4836 and Psyr_4837 are separated by 151 nucleotides
Psyr_4834: Psyr_4834 - histidine:proton symporter, AAT family, at 5,737,809 to 5,739,185
_4834
Psyr_4835: Psyr_4835 - imidazolonepropionase, at 5,739,201 to 5,740,406
_4835
Psyr_4836: Psyr_4836 - N-formylglutamate deformylase, at 5,740,418 to 5,741,218
_4836
Psyr_4837: Psyr_4837 - Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase, at 5,741,370 to 5,743,628
_4837
Position (kb) 5739
5740
5741 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 5738.553 kb on + strand, within Psyr_4834 at 5738.553 kb on + strand, within Psyr_4834 at 5738.553 kb on + strand, within Psyr_4834 at 5738.553 kb on + strand, within Psyr_4834 at 5738.553 kb on + strand, within Psyr_4834 at 5738.554 kb on - strand, within Psyr_4834 at 5738.554 kb on - strand, within Psyr_4834 at 5738.586 kb on + strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.862 kb on + strand, within Psyr_4834 at 5738.863 kb on - strand, within Psyr_4834 at 5738.863 kb on - strand, within Psyr_4834 at 5738.863 kb on - strand, within Psyr_4834 at 5738.863 kb on - strand, within Psyr_4834 at 5738.863 kb on - strand, within Psyr_4834 at 5739.075 kb on + strand at 5739.142 kb on - strand at 5739.142 kb on - strand at 5739.253 kb on - strand at 5739.404 kb on + strand, within Psyr_4835 at 5739.404 kb on + strand, within Psyr_4835 at 5739.405 kb on - strand, within Psyr_4835 at 5739.405 kb on - strand, within Psyr_4835 at 5739.462 kb on + strand, within Psyr_4835 at 5739.492 kb on - strand, within Psyr_4835 at 5739.540 kb on + strand, within Psyr_4835 at 5739.540 kb on + strand, within Psyr_4835 at 5739.729 kb on + strand, within Psyr_4835 at 5739.750 kb on + strand, within Psyr_4835 at 5739.750 kb on + strand, within Psyr_4835 at 5739.750 kb on + strand, within Psyr_4835 at 5739.750 kb on + strand, within Psyr_4835 at 5739.751 kb on - strand, within Psyr_4835 at 5739.751 kb on - strand, within Psyr_4835 at 5739.751 kb on - strand, within Psyr_4835 at 5739.751 kb on - strand, within Psyr_4835 at 5739.751 kb on - strand, within Psyr_4835 at 5739.831 kb on + strand, within Psyr_4835 at 5739.832 kb on - strand, within Psyr_4835 at 5739.955 kb on - strand, within Psyr_4835 at 5740.345 kb on - strand at 5740.345 kb on - strand at 5740.569 kb on - strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.713 kb on + strand, within Psyr_4836 at 5740.714 kb on - strand, within Psyr_4836 at 5740.763 kb on + strand, within Psyr_4836 at 5740.788 kb on - strand, within Psyr_4836 at 5740.994 kb on + strand, within Psyr_4836 at 5740.995 kb on - strand, within Psyr_4836 at 5740.995 kb on - strand, within Psyr_4836 at 5740.995 kb on - strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.152 kb on + strand at 5741.298 kb on + strand at 5741.299 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 5,738,553 + Psyr_4834 0.54 -1.9 5,738,553 + Psyr_4834 0.54 -2.1 5,738,553 + Psyr_4834 0.54 -0.3 5,738,553 + Psyr_4834 0.54 +3.0 5,738,553 + Psyr_4834 0.54 +4.4 5,738,554 - Psyr_4834 0.54 -2.4 5,738,554 - Psyr_4834 0.54 +1.0 5,738,586 + Psyr_4834 0.56 +0.0 5,738,742 + Psyr_4834 0.68 +1.6 5,738,742 + Psyr_4834 0.68 -0.4 5,738,742 + Psyr_4834 0.68 +0.2 5,738,742 + Psyr_4834 0.68 -2.2 5,738,742 + Psyr_4834 0.68 -0.6 5,738,742 + Psyr_4834 0.68 +2.3 5,738,742 + Psyr_4834 0.68 +1.0 5,738,742 + Psyr_4834 0.68 -1.3 5,738,742 + Psyr_4834 0.68 +0.2 5,738,743 - Psyr_4834 0.68 +3.7 5,738,743 - Psyr_4834 0.68 -0.6 5,738,743 - Psyr_4834 0.68 +2.0 5,738,743 - Psyr_4834 0.68 -0.2 5,738,743 - Psyr_4834 0.68 -3.9 5,738,862 + Psyr_4834 0.76 -0.4 5,738,863 - Psyr_4834 0.77 -2.1 5,738,863 - Psyr_4834 0.77 -2.8 5,738,863 - Psyr_4834 0.77 +2.0 5,738,863 - Psyr_4834 0.77 -2.3 5,738,863 - Psyr_4834 0.77 -0.9 5,739,075 + -1.0 5,739,142 - -2.1 5,739,142 - +2.7 5,739,253 - -2.9 5,739,404 + Psyr_4835 0.17 +2.7 5,739,404 + Psyr_4835 0.17 -0.3 5,739,405 - Psyr_4835 0.17 +3.8 5,739,405 - Psyr_4835 0.17 +0.4 5,739,462 + Psyr_4835 0.22 +3.5 5,739,492 - Psyr_4835 0.24 -1.6 5,739,540 + Psyr_4835 0.28 -1.8 5,739,540 + Psyr_4835 0.28 +1.2 5,739,729 + Psyr_4835 0.44 +2.6 5,739,750 + Psyr_4835 0.46 +2.3 5,739,750 + Psyr_4835 0.46 +0.3 5,739,750 + Psyr_4835 0.46 +4.1 5,739,750 + Psyr_4835 0.46 -1.3 5,739,751 - Psyr_4835 0.46 +0.5 5,739,751 - Psyr_4835 0.46 -0.6 5,739,751 - Psyr_4835 0.46 -0.3 5,739,751 - Psyr_4835 0.46 +2.3 5,739,751 - Psyr_4835 0.46 +2.0 5,739,831 + Psyr_4835 0.52 +0.0 5,739,832 - Psyr_4835 0.52 +2.0 5,739,955 - Psyr_4835 0.63 -3.6 5,740,345 - +3.0 5,740,345 - -0.3 5,740,569 - Psyr_4836 0.19 -0.4 5,740,664 + Psyr_4836 0.31 -4.6 5,740,664 + Psyr_4836 0.31 -5.1 5,740,664 + Psyr_4836 0.31 +3.0 5,740,664 + Psyr_4836 0.31 -0.9 5,740,664 + Psyr_4836 0.31 +0.2 5,740,665 - Psyr_4836 0.31 -1.7 5,740,665 - Psyr_4836 0.31 +1.0 5,740,665 - Psyr_4836 0.31 +0.0 5,740,665 - Psyr_4836 0.31 -1.5 5,740,665 - Psyr_4836 0.31 -2.5 5,740,665 - Psyr_4836 0.31 -1.7 5,740,665 - Psyr_4836 0.31 +0.0 5,740,665 - Psyr_4836 0.31 -4.8 5,740,665 - Psyr_4836 0.31 +2.6 5,740,665 - Psyr_4836 0.31 -4.3 5,740,665 - Psyr_4836 0.31 +2.0 5,740,713 + Psyr_4836 0.37 -1.0 5,740,714 - Psyr_4836 0.37 +0.7 5,740,763 + Psyr_4836 0.43 -0.4 5,740,788 - Psyr_4836 0.46 -1.0 5,740,994 + Psyr_4836 0.72 +1.6 5,740,995 - Psyr_4836 0.72 +0.9 5,740,995 - Psyr_4836 0.72 -1.0 5,740,995 - Psyr_4836 0.72 -1.2 5,741,102 + Psyr_4836 0.85 -1.9 5,741,102 + Psyr_4836 0.85 -2.0 5,741,102 + Psyr_4836 0.85 -3.4 5,741,102 + Psyr_4836 0.85 -2.7 5,741,102 + Psyr_4836 0.85 -2.3 5,741,102 + Psyr_4836 0.85 +3.8 5,741,102 + Psyr_4836 0.85 -0.6 5,741,102 + Psyr_4836 0.85 +1.3 5,741,102 + Psyr_4836 0.85 -0.7 5,741,102 + Psyr_4836 0.85 +1.8 5,741,102 + Psyr_4836 0.85 -1.6 5,741,102 + Psyr_4836 0.85 +1.0 5,741,103 - Psyr_4836 0.86 +0.5 5,741,103 - Psyr_4836 0.86 +0.3 5,741,103 - Psyr_4836 0.86 -0.8 5,741,103 - Psyr_4836 0.86 +3.0 5,741,103 - Psyr_4836 0.86 -0.4 5,741,152 + -0.2 5,741,298 + -0.5 5,741,299 - +0.5
Or see this region's nucleotide sequence