Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4822 and Psyr_4823 are separated by 288 nucleotides Psyr_4823 and Psyr_4824 are separated by 81 nucleotides
Psyr_4822: Psyr_4822 - Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I), at 5,718,853 to 5,720,289
_4822
Psyr_4823: Psyr_4823 - Aldo/keto reductase, at 5,720,578 to 5,721,615
_4823
Psyr_4824: Psyr_4824 - ABC transporter, substrate-binding protein, aliphatic sulfonate, at 5,721,697 to 5,722,632
_4824
Position (kb) 5720
5721
5722 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5 at 5719.894 kb on + strand, within Psyr_4822 at 5719.894 kb on + strand, within Psyr_4822 at 5719.895 kb on - strand, within Psyr_4822 at 5719.895 kb on - strand, within Psyr_4822 at 5719.895 kb on - strand, within Psyr_4822 at 5720.295 kb on + strand at 5720.295 kb on + strand at 5720.295 kb on + strand at 5720.295 kb on + strand at 5720.295 kb on + strand at 5720.296 kb on - strand at 5720.296 kb on - strand at 5720.296 kb on - strand at 5720.297 kb on + strand at 5720.297 kb on + strand at 5720.297 kb on + strand at 5720.297 kb on + strand at 5720.297 kb on + strand at 5720.297 kb on + strand at 5720.297 kb on + strand at 5720.297 kb on + strand at 5720.297 kb on + strand at 5720.297 kb on + strand at 5720.297 kb on + strand at 5720.297 kb on + strand at 5720.297 kb on + strand at 5720.297 kb on + strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.298 kb on - strand at 5720.316 kb on + strand at 5720.337 kb on + strand at 5720.337 kb on + strand at 5720.337 kb on + strand at 5720.337 kb on + strand at 5720.337 kb on + strand at 5720.337 kb on + strand at 5720.337 kb on + strand at 5720.337 kb on + strand at 5720.338 kb on - strand at 5720.338 kb on - strand at 5720.338 kb on - strand at 5720.338 kb on - strand at 5720.338 kb on - strand at 5720.338 kb on - strand at 5720.338 kb on - strand at 5720.338 kb on - strand at 5720.338 kb on - strand at 5720.400 kb on + strand at 5720.401 kb on - strand at 5720.504 kb on - strand at 5720.504 kb on - strand at 5720.504 kb on - strand at 5720.507 kb on - strand at 5720.524 kb on + strand at 5720.524 kb on + strand at 5720.528 kb on + strand at 5720.528 kb on + strand at 5720.528 kb on + strand at 5720.528 kb on + strand at 5720.528 kb on + strand at 5720.528 kb on + strand at 5720.528 kb on + strand at 5720.529 kb on - strand at 5720.529 kb on - strand at 5720.529 kb on - strand at 5720.529 kb on - strand at 5720.529 kb on - strand at 5720.529 kb on - strand at 5720.529 kb on - strand at 5720.529 kb on - strand at 5720.529 kb on - strand at 5720.529 kb on - strand at 5720.529 kb on - strand at 5720.529 kb on - strand at 5720.529 kb on - strand at 5720.565 kb on - strand at 5720.565 kb on - strand at 5720.915 kb on + strand, within Psyr_4823 at 5720.915 kb on + strand, within Psyr_4823 at 5720.915 kb on + strand, within Psyr_4823 at 5720.916 kb on - strand, within Psyr_4823 at 5720.916 kb on - strand, within Psyr_4823 at 5720.916 kb on - strand, within Psyr_4823 at 5720.916 kb on - strand, within Psyr_4823 at 5720.916 kb on - strand, within Psyr_4823 at 5720.949 kb on + strand, within Psyr_4823 at 5720.982 kb on + strand, within Psyr_4823 at 5721.026 kb on + strand, within Psyr_4823 at 5721.026 kb on + strand, within Psyr_4823 at 5721.027 kb on - strand, within Psyr_4823 at 5721.027 kb on - strand, within Psyr_4823 at 5721.114 kb on + strand, within Psyr_4823 at 5721.122 kb on + strand, within Psyr_4823 at 5721.122 kb on + strand, within Psyr_4823 at 5721.122 kb on + strand, within Psyr_4823 at 5721.122 kb on + strand, within Psyr_4823 at 5721.122 kb on + strand, within Psyr_4823 at 5721.122 kb on + strand, within Psyr_4823 at 5721.122 kb on + strand, within Psyr_4823 at 5721.122 kb on + strand, within Psyr_4823 at 5721.122 kb on + strand, within Psyr_4823 at 5721.122 kb on + strand, within Psyr_4823 at 5721.122 kb on + strand, within Psyr_4823 at 5721.122 kb on + strand, within Psyr_4823 at 5721.123 kb on - strand, within Psyr_4823 at 5721.123 kb on - strand, within Psyr_4823 at 5721.123 kb on - strand, within Psyr_4823 at 5721.206 kb on + strand, within Psyr_4823 at 5721.206 kb on + strand, within Psyr_4823 at 5721.206 kb on + strand, within Psyr_4823 at 5721.206 kb on + strand, within Psyr_4823 at 5721.207 kb on - strand, within Psyr_4823 at 5721.207 kb on - strand, within Psyr_4823 at 5721.221 kb on + strand, within Psyr_4823 at 5721.269 kb on + strand, within Psyr_4823 at 5721.269 kb on + strand, within Psyr_4823 at 5721.269 kb on + strand, within Psyr_4823 at 5721.269 kb on + strand, within Psyr_4823 at 5721.269 kb on + strand, within Psyr_4823 at 5721.269 kb on + strand, within Psyr_4823 at 5721.269 kb on + strand, within Psyr_4823 at 5721.269 kb on + strand, within Psyr_4823 at 5721.269 kb on + strand, within Psyr_4823 at 5721.269 kb on + strand, within Psyr_4823 at 5721.269 kb on + strand, within Psyr_4823 at 5721.270 kb on - strand, within Psyr_4823 at 5721.270 kb on - strand, within Psyr_4823 at 5721.270 kb on - strand, within Psyr_4823 at 5721.270 kb on - strand, within Psyr_4823 at 5721.273 kb on + strand, within Psyr_4823 at 5721.273 kb on + strand, within Psyr_4823 at 5721.273 kb on + strand, within Psyr_4823 at 5721.274 kb on - strand, within Psyr_4823 at 5721.274 kb on - strand, within Psyr_4823 at 5721.274 kb on - strand, within Psyr_4823 at 5721.274 kb on - strand, within Psyr_4823 at 5721.274 kb on - strand, within Psyr_4823 at 5721.419 kb on + strand, within Psyr_4823 at 5721.419 kb on + strand, within Psyr_4823 at 5721.419 kb on + strand, within Psyr_4823 at 5721.420 kb on - strand, within Psyr_4823 at 5721.572 kb on + strand at 5721.608 kb on + strand at 5721.608 kb on + strand at 5721.608 kb on + strand at 5721.608 kb on + strand at 5721.608 kb on + strand at 5721.608 kb on + strand at 5721.608 kb on + strand at 5721.608 kb on + strand at 5721.608 kb on + strand at 5721.608 kb on + strand at 5721.608 kb on + strand at 5721.608 kb on + strand at 5721.608 kb on + strand at 5721.609 kb on - strand at 5721.609 kb on - strand at 5721.609 kb on - strand at 5721.609 kb on - strand at 5721.823 kb on + strand, within Psyr_4824 at 5721.842 kb on + strand, within Psyr_4824 at 5721.843 kb on - strand, within Psyr_4824 at 5721.886 kb on + strand, within Psyr_4824 at 5721.886 kb on + strand, within Psyr_4824 at 5721.887 kb on - strand, within Psyr_4824 at 5721.895 kb on - strand, within Psyr_4824 at 5721.895 kb on - strand, within Psyr_4824 at 5722.001 kb on + strand, within Psyr_4824 at 5722.001 kb on + strand, within Psyr_4824 at 5722.001 kb on + strand, within Psyr_4824 at 5722.001 kb on + strand, within Psyr_4824 at 5722.002 kb on - strand, within Psyr_4824 at 5722.002 kb on - strand, within Psyr_4824 at 5722.002 kb on - strand, within Psyr_4824 at 5722.002 kb on - strand, within Psyr_4824 at 5722.076 kb on + strand, within Psyr_4824 at 5722.076 kb on + strand, within Psyr_4824 at 5722.076 kb on + strand, within Psyr_4824 at 5722.076 kb on + strand, within Psyr_4824 at 5722.076 kb on + strand, within Psyr_4824 at 5722.076 kb on + strand, within Psyr_4824 at 5722.077 kb on - strand, within Psyr_4824 at 5722.077 kb on - strand, within Psyr_4824 at 5722.077 kb on - strand, within Psyr_4824 at 5722.079 kb on + strand, within Psyr_4824 at 5722.079 kb on + strand, within Psyr_4824 at 5722.079 kb on + strand, within Psyr_4824 at 5722.079 kb on + strand, within Psyr_4824 at 5722.080 kb on - strand, within Psyr_4824 at 5722.080 kb on - strand, within Psyr_4824 at 5722.152 kb on - strand, within Psyr_4824 at 5722.152 kb on - strand, within Psyr_4824 at 5722.165 kb on - strand, within Psyr_4824 at 5722.165 kb on - strand, within Psyr_4824 at 5722.212 kb on + strand, within Psyr_4824 at 5722.212 kb on + strand, within Psyr_4824 at 5722.212 kb on + strand, within Psyr_4824 at 5722.212 kb on + strand, within Psyr_4824 at 5722.213 kb on - strand, within Psyr_4824 at 5722.213 kb on - strand, within Psyr_4824 at 5722.213 kb on - strand, within Psyr_4824 at 5722.337 kb on + strand, within Psyr_4824 at 5722.337 kb on + strand, within Psyr_4824 at 5722.337 kb on + strand, within Psyr_4824 at 5722.338 kb on - strand, within Psyr_4824 at 5722.338 kb on - strand, within Psyr_4824 at 5722.338 kb on - strand, within Psyr_4824
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 5,719,894 + Psyr_4822 0.72 -1.9 5,719,894 + Psyr_4822 0.72 +0.0 5,719,895 - Psyr_4822 0.73 +2.3 5,719,895 - Psyr_4822 0.73 -2.1 5,719,895 - Psyr_4822 0.73 -2.7 5,720,295 + +1.0 5,720,295 + +3.7 5,720,295 + +3.8 5,720,295 + +3.3 5,720,295 + +4.1 5,720,296 - +3.5 5,720,296 - -3.2 5,720,296 - +2.3 5,720,297 + -0.6 5,720,297 + +3.0 5,720,297 + +4.0 5,720,297 + +0.4 5,720,297 + -2.5 5,720,297 + -1.7 5,720,297 + +0.6 5,720,297 + +5.3 5,720,297 + -1.7 5,720,297 + -0.7 5,720,297 + +1.5 5,720,297 + -0.5 5,720,297 + -0.4 5,720,297 + -2.0 5,720,298 - +3.7 5,720,298 - -0.4 5,720,298 - -0.3 5,720,298 - +3.0 5,720,298 - +4.3 5,720,298 - -2.2 5,720,298 - +0.0 5,720,298 - +1.6 5,720,298 - +1.0 5,720,298 - +1.0 5,720,298 - +0.0 5,720,298 - -0.8 5,720,298 - -0.1 5,720,298 - +0.4 5,720,298 - +1.0 5,720,298 - +2.6 5,720,316 + -2.1 5,720,337 + +1.5 5,720,337 + +0.8 5,720,337 + +0.6 5,720,337 + +3.0 5,720,337 + -1.0 5,720,337 + -0.2 5,720,337 + -3.2 5,720,337 + -3.0 5,720,338 - +3.9 5,720,338 - -2.2 5,720,338 - -1.7 5,720,338 - -0.3 5,720,338 - -1.1 5,720,338 - -4.8 5,720,338 - +3.2 5,720,338 - -0.9 5,720,338 - -1.2 5,720,400 + +2.0 5,720,401 - -1.8 5,720,504 - +4.0 5,720,504 - +1.6 5,720,504 - -1.6 5,720,507 - +4.1 5,720,524 + +3.6 5,720,524 + +1.0 5,720,528 + +3.0 5,720,528 + -2.1 5,720,528 + -0.9 5,720,528 + -0.7 5,720,528 + +2.6 5,720,528 + +2.0 5,720,528 + +1.6 5,720,529 - +4.1 5,720,529 - -0.4 5,720,529 - -1.3 5,720,529 - -0.7 5,720,529 - -0.7 5,720,529 - -1.8 5,720,529 - +0.0 5,720,529 - -2.8 5,720,529 - +1.0 5,720,529 - +3.9 5,720,529 - +0.9 5,720,529 - +0.4 5,720,529 - +2.3 5,720,565 - -1.0 5,720,565 - +0.0 5,720,915 + Psyr_4823 0.32 +1.6 5,720,915 + Psyr_4823 0.32 -1.1 5,720,915 + Psyr_4823 0.32 +1.6 5,720,916 - Psyr_4823 0.33 +1.9 5,720,916 - Psyr_4823 0.33 +3.7 5,720,916 - Psyr_4823 0.33 +0.1 5,720,916 - Psyr_4823 0.33 +3.0 5,720,916 - Psyr_4823 0.33 -1.1 5,720,949 + Psyr_4823 0.36 -0.4 5,720,982 + Psyr_4823 0.39 -0.8 5,721,026 + Psyr_4823 0.43 +0.0 5,721,026 + Psyr_4823 0.43 +0.8 5,721,027 - Psyr_4823 0.43 -1.6 5,721,027 - Psyr_4823 0.43 +3.6 5,721,114 + Psyr_4823 0.52 +4.0 5,721,122 + Psyr_4823 0.52 -0.4 5,721,122 + Psyr_4823 0.52 -1.0 5,721,122 + Psyr_4823 0.52 -0.9 5,721,122 + Psyr_4823 0.52 -0.4 5,721,122 + Psyr_4823 0.52 +0.0 5,721,122 + Psyr_4823 0.52 -1.9 5,721,122 + Psyr_4823 0.52 +0.5 5,721,122 + Psyr_4823 0.52 +2.8 5,721,122 + Psyr_4823 0.52 -0.7 5,721,122 + Psyr_4823 0.52 +3.2 5,721,122 + Psyr_4823 0.52 -1.6 5,721,122 + Psyr_4823 0.52 -0.3 5,721,123 - Psyr_4823 0.53 -0.2 5,721,123 - Psyr_4823 0.53 -0.4 5,721,123 - Psyr_4823 0.53 +2.3 5,721,206 + Psyr_4823 0.61 -0.8 5,721,206 + Psyr_4823 0.61 -0.7 5,721,206 + Psyr_4823 0.61 +1.6 5,721,206 + Psyr_4823 0.61 +3.7 5,721,207 - Psyr_4823 0.61 -1.6 5,721,207 - Psyr_4823 0.61 +2.0 5,721,221 + Psyr_4823 0.62 +0.7 5,721,269 + Psyr_4823 0.67 -0.5 5,721,269 + Psyr_4823 0.67 +3.9 5,721,269 + Psyr_4823 0.67 -4.3 5,721,269 + Psyr_4823 0.67 -1.2 5,721,269 + Psyr_4823 0.67 +1.5 5,721,269 + Psyr_4823 0.67 -1.2 5,721,269 + Psyr_4823 0.67 +0.0 5,721,269 + Psyr_4823 0.67 -1.5 5,721,269 + Psyr_4823 0.67 -0.2 5,721,269 + Psyr_4823 0.67 -0.7 5,721,269 + Psyr_4823 0.67 +2.0 5,721,270 - Psyr_4823 0.67 -0.3 5,721,270 - Psyr_4823 0.67 -2.5 5,721,270 - Psyr_4823 0.67 -0.5 5,721,270 - Psyr_4823 0.67 +1.6 5,721,273 + Psyr_4823 0.67 -1.0 5,721,273 + Psyr_4823 0.67 -1.5 5,721,273 + Psyr_4823 0.67 +0.0 5,721,274 - Psyr_4823 0.67 +0.3 5,721,274 - Psyr_4823 0.67 +2.0 5,721,274 - Psyr_4823 0.67 +2.3 5,721,274 - Psyr_4823 0.67 +3.0 5,721,274 - Psyr_4823 0.67 -2.1 5,721,419 + Psyr_4823 0.81 -1.1 5,721,419 + Psyr_4823 0.81 -1.3 5,721,419 + Psyr_4823 0.81 +3.7 5,721,420 - Psyr_4823 0.81 -2.1 5,721,572 + +0.3 5,721,608 + +3.2 5,721,608 + -2.8 5,721,608 + -0.1 5,721,608 + -1.0 5,721,608 + +3.6 5,721,608 + -0.3 5,721,608 + -0.1 5,721,608 + +0.1 5,721,608 + -0.7 5,721,608 + -3.2 5,721,608 + +1.6 5,721,608 + +4.3 5,721,608 + +1.1 5,721,609 - -2.2 5,721,609 - +0.0 5,721,609 - -0.5 5,721,609 - -2.2 5,721,823 + Psyr_4824 0.13 -1.6 5,721,842 + Psyr_4824 0.15 -1.4 5,721,843 - Psyr_4824 0.16 -0.0 5,721,886 + Psyr_4824 0.20 -0.1 5,721,886 + Psyr_4824 0.20 +0.8 5,721,887 - Psyr_4824 0.20 -0.4 5,721,895 - Psyr_4824 0.21 +0.2 5,721,895 - Psyr_4824 0.21 +1.9 5,722,001 + Psyr_4824 0.32 -1.4 5,722,001 + Psyr_4824 0.32 +2.3 5,722,001 + Psyr_4824 0.32 +4.3 5,722,001 + Psyr_4824 0.32 -1.2 5,722,002 - Psyr_4824 0.33 +2.6 5,722,002 - Psyr_4824 0.33 +2.7 5,722,002 - Psyr_4824 0.33 -2.0 5,722,002 - Psyr_4824 0.33 +0.6 5,722,076 + Psyr_4824 0.40 -2.8 5,722,076 + Psyr_4824 0.40 +3.5 5,722,076 + Psyr_4824 0.40 +2.6 5,722,076 + Psyr_4824 0.40 -2.7 5,722,076 + Psyr_4824 0.40 +2.0 5,722,076 + Psyr_4824 0.40 +1.4 5,722,077 - Psyr_4824 0.41 +1.4 5,722,077 - Psyr_4824 0.41 -1.6 5,722,077 - Psyr_4824 0.41 -0.5 5,722,079 + Psyr_4824 0.41 -1.7 5,722,079 + Psyr_4824 0.41 +3.5 5,722,079 + Psyr_4824 0.41 -0.4 5,722,079 + Psyr_4824 0.41 +0.7 5,722,080 - Psyr_4824 0.41 +3.3 5,722,080 - Psyr_4824 0.41 -2.9 5,722,152 - Psyr_4824 0.49 -1.5 5,722,152 - Psyr_4824 0.49 -2.7 5,722,165 - Psyr_4824 0.50 -1.9 5,722,165 - Psyr_4824 0.50 -2.3 5,722,212 + Psyr_4824 0.55 +0.8 5,722,212 + Psyr_4824 0.55 -3.4 5,722,212 + Psyr_4824 0.55 +3.0 5,722,212 + Psyr_4824 0.55 -0.9 5,722,213 - Psyr_4824 0.55 +3.6 5,722,213 - Psyr_4824 0.55 -0.4 5,722,213 - Psyr_4824 0.55 +2.8 5,722,337 + Psyr_4824 0.68 +3.2 5,722,337 + Psyr_4824 0.68 -0.9 5,722,337 + Psyr_4824 0.68 +0.8 5,722,338 - Psyr_4824 0.68 -1.3 5,722,338 - Psyr_4824 0.68 +3.3 5,722,338 - Psyr_4824 0.68 +0.4
Or see this region's nucleotide sequence