Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4810 and Psyr_4811 are separated by 0 nucleotides Psyr_4811 and Psyr_4812 are separated by 234 nucleotides
Psyr_4810: Psyr_4810 - sodium/proton antiporter, CPA1 family, at 5,704,737 to 5,705,996
_4810
Psyr_4811: Psyr_4811 - transcriptional regulator, AraC family, at 5,705,997 to 5,706,944
_4811
Psyr_4812: Psyr_4812 - sorbitol-binding protein / mannitol-binding protein, at 5,707,179 to 5,708,495
_4812
Position (kb) 5705
5706
5707 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 5705.017 kb on - strand, within Psyr_4810 at 5705.017 kb on - strand, within Psyr_4810 at 5705.130 kb on + strand, within Psyr_4810 at 5705.130 kb on + strand, within Psyr_4810 at 5705.131 kb on - strand, within Psyr_4810 at 5705.131 kb on - strand, within Psyr_4810 at 5705.131 kb on - strand, within Psyr_4810 at 5705.131 kb on - strand, within Psyr_4810 at 5705.397 kb on + strand, within Psyr_4810 at 5705.398 kb on - strand, within Psyr_4810 at 5705.424 kb on + strand, within Psyr_4810 at 5705.425 kb on - strand, within Psyr_4810 at 5705.580 kb on + strand, within Psyr_4810 at 5705.581 kb on - strand, within Psyr_4810 at 5705.581 kb on - strand, within Psyr_4810 at 5705.581 kb on - strand, within Psyr_4810 at 5705.892 kb on + strand at 5705.892 kb on + strand at 5705.892 kb on + strand at 5705.892 kb on + strand at 5705.892 kb on + strand at 5705.892 kb on + strand at 5705.892 kb on + strand at 5705.892 kb on + strand at 5705.893 kb on - strand at 5705.893 kb on - strand at 5705.893 kb on - strand at 5705.893 kb on - strand at 5705.893 kb on - strand at 5706.180 kb on - strand, within Psyr_4811 at 5706.266 kb on + strand, within Psyr_4811 at 5706.706 kb on + strand, within Psyr_4811 at 5706.706 kb on + strand, within Psyr_4811 at 5706.706 kb on + strand, within Psyr_4811 at 5706.706 kb on + strand, within Psyr_4811 at 5706.706 kb on + strand, within Psyr_4811 at 5706.707 kb on - strand, within Psyr_4811 at 5706.707 kb on - strand, within Psyr_4811 at 5706.707 kb on - strand, within Psyr_4811 at 5706.707 kb on - strand, within Psyr_4811 at 5706.707 kb on - strand, within Psyr_4811 at 5706.707 kb on - strand, within Psyr_4811 at 5706.796 kb on + strand, within Psyr_4811 at 5706.843 kb on - strand, within Psyr_4811 at 5706.944 kb on + strand at 5706.944 kb on + strand at 5706.945 kb on - strand at 5706.945 kb on - strand at 5706.945 kb on - strand at 5706.945 kb on - strand at 5706.945 kb on - strand at 5706.945 kb on - strand at 5706.945 kb on - strand at 5706.969 kb on - strand at 5706.969 kb on - strand at 5706.993 kb on + strand at 5706.994 kb on - strand at 5707.039 kb on - strand at 5707.089 kb on - strand at 5707.089 kb on - strand at 5707.175 kb on + strand at 5707.175 kb on + strand at 5707.176 kb on - strand at 5707.430 kb on - strand, within Psyr_4812 at 5707.430 kb on - strand, within Psyr_4812 at 5707.446 kb on + strand, within Psyr_4812 at 5707.446 kb on + strand, within Psyr_4812 at 5707.447 kb on - strand, within Psyr_4812 at 5707.509 kb on + strand, within Psyr_4812 at 5707.523 kb on + strand, within Psyr_4812 at 5707.524 kb on - strand, within Psyr_4812 at 5707.569 kb on + strand, within Psyr_4812 at 5707.570 kb on - strand, within Psyr_4812 at 5707.570 kb on - strand, within Psyr_4812 at 5707.570 kb on - strand, within Psyr_4812 at 5707.570 kb on - strand, within Psyr_4812 at 5707.585 kb on - strand, within Psyr_4812 at 5707.601 kb on + strand, within Psyr_4812 at 5707.601 kb on + strand, within Psyr_4812 at 5707.601 kb on + strand, within Psyr_4812 at 5707.601 kb on + strand, within Psyr_4812 at 5707.602 kb on - strand, within Psyr_4812 at 5707.602 kb on - strand, within Psyr_4812 at 5707.602 kb on - strand, within Psyr_4812 at 5707.602 kb on - strand, within Psyr_4812 at 5707.602 kb on - strand, within Psyr_4812 at 5707.602 kb on - strand, within Psyr_4812 at 5707.602 kb on - strand, within Psyr_4812 at 5707.602 kb on - strand, within Psyr_4812 at 5707.602 kb on - strand, within Psyr_4812 at 5707.602 kb on - strand, within Psyr_4812 at 5707.602 kb on - strand, within Psyr_4812 at 5707.605 kb on + strand, within Psyr_4812 at 5707.605 kb on + strand, within Psyr_4812 at 5707.605 kb on + strand, within Psyr_4812 at 5707.605 kb on + strand, within Psyr_4812 at 5707.606 kb on - strand, within Psyr_4812 at 5707.606 kb on - strand, within Psyr_4812 at 5707.606 kb on - strand, within Psyr_4812 at 5707.606 kb on - strand, within Psyr_4812 at 5707.606 kb on - strand at 5707.606 kb on - strand, within Psyr_4812 at 5707.697 kb on + strand, within Psyr_4812 at 5707.697 kb on + strand, within Psyr_4812 at 5707.697 kb on + strand, within Psyr_4812 at 5707.698 kb on - strand, within Psyr_4812 at 5707.698 kb on - strand, within Psyr_4812 at 5707.885 kb on - strand, within Psyr_4812
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 5,705,017 - Psyr_4810 0.22 +1.0 5,705,017 - Psyr_4810 0.22 -0.1 5,705,130 + Psyr_4810 0.31 -1.2 5,705,130 + Psyr_4810 0.31 -0.5 5,705,131 - Psyr_4810 0.31 +0.0 5,705,131 - Psyr_4810 0.31 +2.0 5,705,131 - Psyr_4810 0.31 -0.8 5,705,131 - Psyr_4810 0.31 -2.0 5,705,397 + Psyr_4810 0.52 -0.3 5,705,398 - Psyr_4810 0.52 -1.6 5,705,424 + Psyr_4810 0.55 +0.0 5,705,425 - Psyr_4810 0.55 -1.0 5,705,580 + Psyr_4810 0.67 +0.1 5,705,581 - Psyr_4810 0.67 -0.5 5,705,581 - Psyr_4810 0.67 -0.2 5,705,581 - Psyr_4810 0.67 -1.2 5,705,892 + +0.5 5,705,892 + -0.3 5,705,892 + +0.2 5,705,892 + +0.0 5,705,892 + +3.5 5,705,892 + +1.1 5,705,892 + +4.7 5,705,892 + +0.2 5,705,893 - -1.0 5,705,893 - +0.8 5,705,893 - -0.9 5,705,893 - +0.0 5,705,893 - +1.0 5,706,180 - Psyr_4811 0.19 +2.2 5,706,266 + Psyr_4811 0.28 -2.2 5,706,706 + Psyr_4811 0.75 +1.2 5,706,706 + Psyr_4811 0.75 +0.8 5,706,706 + Psyr_4811 0.75 -1.4 5,706,706 + Psyr_4811 0.75 +3.5 5,706,706 + Psyr_4811 0.75 +4.0 5,706,707 - Psyr_4811 0.75 +0.9 5,706,707 - Psyr_4811 0.75 +0.0 5,706,707 - Psyr_4811 0.75 +0.0 5,706,707 - Psyr_4811 0.75 -0.7 5,706,707 - Psyr_4811 0.75 +3.3 5,706,707 - Psyr_4811 0.75 +3.7 5,706,796 + Psyr_4811 0.84 -0.9 5,706,843 - Psyr_4811 0.89 -2.8 5,706,944 + -2.4 5,706,944 + -0.9 5,706,945 - -1.2 5,706,945 - -0.7 5,706,945 - -0.5 5,706,945 - -1.3 5,706,945 - -0.5 5,706,945 - +1.6 5,706,945 - -0.5 5,706,969 - -1.1 5,706,969 - +0.0 5,706,993 + +0.6 5,706,994 - +0.4 5,707,039 - +2.6 5,707,089 - +4.2 5,707,089 - -1.9 5,707,175 + -2.2 5,707,175 + -3.7 5,707,176 - +0.9 5,707,430 - Psyr_4812 0.19 +2.8 5,707,430 - Psyr_4812 0.19 -2.3 5,707,446 + Psyr_4812 0.20 -1.6 5,707,446 + Psyr_4812 0.20 -1.2 5,707,447 - Psyr_4812 0.20 +0.8 5,707,509 + Psyr_4812 0.25 +1.6 5,707,523 + Psyr_4812 0.26 -2.8 5,707,524 - Psyr_4812 0.26 -3.4 5,707,569 + Psyr_4812 0.30 -1.2 5,707,570 - Psyr_4812 0.30 +3.0 5,707,570 - Psyr_4812 0.30 -1.8 5,707,570 - Psyr_4812 0.30 -2.4 5,707,570 - Psyr_4812 0.30 -0.1 5,707,585 - Psyr_4812 0.31 -1.4 5,707,601 + Psyr_4812 0.32 -0.6 5,707,601 + Psyr_4812 0.32 +1.3 5,707,601 + Psyr_4812 0.32 -2.1 5,707,601 + Psyr_4812 0.32 +2.8 5,707,602 - Psyr_4812 0.32 +4.6 5,707,602 - Psyr_4812 0.32 -1.9 5,707,602 - Psyr_4812 0.32 -1.2 5,707,602 - Psyr_4812 0.32 -0.5 5,707,602 - Psyr_4812 0.32 -0.9 5,707,602 - Psyr_4812 0.32 -1.0 5,707,602 - Psyr_4812 0.32 -0.5 5,707,602 - Psyr_4812 0.32 -1.8 5,707,602 - Psyr_4812 0.32 +0.5 5,707,602 - Psyr_4812 0.32 -2.1 5,707,602 - Psyr_4812 0.32 -0.3 5,707,605 + Psyr_4812 0.32 -4.9 5,707,605 + Psyr_4812 0.32 +3.0 5,707,605 + Psyr_4812 0.32 +3.2 5,707,605 + Psyr_4812 0.32 -2.7 5,707,606 - Psyr_4812 0.32 +0.0 5,707,606 - Psyr_4812 0.32 +3.0 5,707,606 - Psyr_4812 0.32 -2.6 5,707,606 - Psyr_4812 0.32 +1.0 5,707,606 - +0.0 5,707,606 - Psyr_4812 0.32 +0.0 5,707,697 + Psyr_4812 0.39 +1.6 5,707,697 + Psyr_4812 0.39 -3.1 5,707,697 + Psyr_4812 0.39 +0.0 5,707,698 - Psyr_4812 0.39 +2.0 5,707,698 - Psyr_4812 0.39 -1.8 5,707,885 - Psyr_4812 0.54 +3.6
Or see this region's nucleotide sequence