Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4797 and Psyr_4798 are separated by 46 nucleotides Psyr_4798 and Psyr_4799 are separated by 114 nucleotides Psyr_4799 and Psyr_4800 overlap by 4 nucleotides Psyr_4800 and Psyr_4801 are separated by 253 nucleotides
Psyr_4797: Psyr_4797 - Protein of unknown function DUF1090, at 5,687,399 to 5,687,809
_4797
Psyr_4798: Psyr_4798 - conserved hypothetical protein, at 5,687,856 to 5,688,257
_4798
Psyr_4799: Psyr_4799 - Heavy metal sensor kinase, at 5,688,372 to 5,689,763
_4799
Psyr_4800: Psyr_4800 - Heavy metal response regulator, at 5,689,760 to 5,690,434
_4800
Psyr_4801: Psyr_4801 - Outer membrane efflux protein, at 5,690,688 to 5,691,914
_4801
Position (kb) 5688
5689
5690 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 5687.381 kb on + strand at 5687.382 kb on - strand at 5687.382 kb on - strand at 5687.399 kb on - strand at 5687.458 kb on - strand, within Psyr_4797 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5688.016 kb on - strand, within Psyr_4798 at 5688.209 kb on + strand, within Psyr_4798 at 5688.210 kb on - strand, within Psyr_4798 at 5688.210 kb on - strand, within Psyr_4798 at 5688.257 kb on + strand at 5688.257 kb on + strand at 5688.257 kb on + strand at 5688.257 kb on + strand at 5688.257 kb on + strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.269 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.272 kb on - strand at 5688.272 kb on - strand at 5688.272 kb on - strand at 5688.272 kb on - strand at 5688.272 kb on - strand at 5688.272 kb on - strand at 5688.318 kb on + strand at 5688.318 kb on + strand at 5688.318 kb on + strand at 5688.318 kb on + strand at 5688.319 kb on - strand at 5688.319 kb on - strand at 5688.319 kb on - strand at 5688.319 kb on - strand at 5688.373 kb on + strand at 5688.373 kb on + strand at 5688.374 kb on - strand at 5688.374 kb on - strand at 5688.384 kb on - strand at 5688.384 kb on - strand at 5688.530 kb on - strand, within Psyr_4799 at 5688.569 kb on + strand, within Psyr_4799 at 5688.597 kb on + strand, within Psyr_4799 at 5688.632 kb on + strand, within Psyr_4799 at 5688.931 kb on + strand, within Psyr_4799 at 5688.931 kb on + strand, within Psyr_4799 at 5688.931 kb on + strand, within Psyr_4799 at 5688.932 kb on - strand, within Psyr_4799 at 5688.932 kb on - strand, within Psyr_4799 at 5689.273 kb on + strand, within Psyr_4799 at 5689.274 kb on - strand, within Psyr_4799 at 5689.274 kb on - strand, within Psyr_4799 at 5689.274 kb on - strand, within Psyr_4799 at 5689.274 kb on - strand, within Psyr_4799 at 5689.455 kb on + strand, within Psyr_4799 at 5689.455 kb on + strand, within Psyr_4799 at 5689.455 kb on + strand, within Psyr_4799 at 5689.455 kb on + strand, within Psyr_4799 at 5689.455 kb on + strand, within Psyr_4799 at 5689.455 kb on + strand, within Psyr_4799 at 5689.456 kb on - strand, within Psyr_4799 at 5689.456 kb on - strand, within Psyr_4799 at 5689.456 kb on - strand, within Psyr_4799 at 5689.456 kb on - strand, within Psyr_4799 at 5689.461 kb on - strand, within Psyr_4799 at 5689.647 kb on + strand at 5689.647 kb on + strand at 5689.647 kb on + strand at 5689.647 kb on + strand at 5689.647 kb on + strand at 5689.647 kb on + strand at 5689.647 kb on + strand at 5689.648 kb on - strand at 5689.648 kb on - strand at 5689.648 kb on - strand at 5689.648 kb on - strand at 5689.648 kb on - strand at 5689.648 kb on - strand at 5689.648 kb on - strand at 5689.648 kb on - strand at 5689.648 kb on - strand at 5689.648 kb on - strand at 5689.648 kb on - strand at 5689.648 kb on - strand at 5689.648 kb on - strand at 5689.648 kb on - strand at 5689.648 kb on - strand at 5689.673 kb on + strand at 5689.674 kb on - strand at 5689.674 kb on - strand at 5689.674 kb on - strand at 5689.674 kb on - strand at 5689.674 kb on - strand at 5689.674 kb on - strand at 5689.674 kb on - strand at 5689.674 kb on - strand at 5689.676 kb on - strand at 5689.676 kb on - strand at 5689.676 kb on - strand at 5689.779 kb on - strand at 5690.145 kb on + strand, within Psyr_4800 at 5690.146 kb on - strand, within Psyr_4800 at 5690.146 kb on - strand, within Psyr_4800 at 5690.301 kb on + strand, within Psyr_4800 at 5690.301 kb on + strand, within Psyr_4800 at 5690.322 kb on + strand, within Psyr_4800 at 5690.322 kb on + strand, within Psyr_4800 at 5690.322 kb on + strand, within Psyr_4800 at 5690.322 kb on + strand, within Psyr_4800 at 5690.322 kb on + strand, within Psyr_4800 at 5690.322 kb on + strand, within Psyr_4800 at 5690.323 kb on - strand, within Psyr_4800 at 5690.323 kb on - strand, within Psyr_4800 at 5690.323 kb on - strand, within Psyr_4800 at 5690.323 kb on - strand, within Psyr_4800 at 5690.324 kb on + strand, within Psyr_4800 at 5690.325 kb on - strand, within Psyr_4800 at 5690.325 kb on - strand, within Psyr_4800 at 5690.325 kb on - strand, within Psyr_4800 at 5690.325 kb on - strand, within Psyr_4800 at 5690.391 kb on + strand at 5690.391 kb on + strand at 5690.391 kb on + strand at 5690.392 kb on - strand at 5690.392 kb on - strand at 5690.392 kb on - strand at 5690.392 kb on - strand at 5690.417 kb on + strand at 5690.418 kb on - strand at 5690.420 kb on + strand at 5690.420 kb on + strand at 5690.420 kb on + strand at 5690.421 kb on - strand at 5690.421 kb on - strand at 5690.421 kb on - strand at 5690.421 kb on - strand at 5690.483 kb on + strand at 5690.483 kb on + strand at 5690.484 kb on - strand at 5690.523 kb on + strand at 5690.546 kb on + strand at 5690.547 kb on - strand at 5690.560 kb on + strand at 5690.561 kb on - strand at 5690.561 kb on - strand at 5690.603 kb on + strand at 5690.604 kb on - strand at 5690.604 kb on - strand at 5690.604 kb on - strand at 5690.604 kb on - strand at 5690.604 kb on - strand at 5690.648 kb on + strand at 5690.648 kb on + strand at 5690.648 kb on + strand at 5690.648 kb on + strand at 5690.648 kb on + strand at 5690.649 kb on - strand at 5690.649 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 5,687,381 + -0.3 5,687,382 - +2.3 5,687,382 - +0.1 5,687,399 - -3.6 5,687,458 - Psyr_4797 0.14 -0.5 5,687,968 + Psyr_4798 0.28 +0.0 5,687,968 + Psyr_4798 0.28 +1.6 5,687,968 + Psyr_4798 0.28 +0.0 5,687,968 + Psyr_4798 0.28 -0.5 5,687,968 + Psyr_4798 0.28 +3.3 5,687,968 + Psyr_4798 0.28 +2.3 5,687,968 + Psyr_4798 0.28 +2.0 5,687,968 + Psyr_4798 0.28 -0.3 5,687,968 + Psyr_4798 0.28 +0.0 5,687,968 + Psyr_4798 0.28 -2.4 5,687,968 + Psyr_4798 0.28 +1.0 5,687,968 + Psyr_4798 0.28 +3.8 5,687,968 + Psyr_4798 0.28 -1.4 5,687,968 + Psyr_4798 0.28 +2.3 5,687,968 + Psyr_4798 0.28 +1.8 5,687,968 + Psyr_4798 0.28 -1.2 5,687,968 + Psyr_4798 0.28 -2.6 5,687,969 - Psyr_4798 0.28 +0.0 5,687,969 - Psyr_4798 0.28 -0.5 5,687,969 - Psyr_4798 0.28 +0.4 5,687,969 - Psyr_4798 0.28 -1.2 5,687,969 - Psyr_4798 0.28 +0.4 5,687,969 - Psyr_4798 0.28 -1.0 5,687,969 - Psyr_4798 0.28 +0.2 5,687,969 - Psyr_4798 0.28 +1.1 5,687,969 - Psyr_4798 0.28 +1.6 5,688,016 - Psyr_4798 0.40 +1.0 5,688,209 + Psyr_4798 0.88 -1.8 5,688,210 - Psyr_4798 0.88 +3.6 5,688,210 - Psyr_4798 0.88 -0.2 5,688,257 + -2.6 5,688,257 + -1.7 5,688,257 + -3.9 5,688,257 + +0.0 5,688,257 + -1.2 5,688,258 - +1.0 5,688,258 - -0.1 5,688,258 - -0.7 5,688,258 - -0.1 5,688,258 - +3.7 5,688,258 - -3.2 5,688,258 - -1.3 5,688,258 - -1.5 5,688,258 - +1.2 5,688,269 + -0.7 5,688,271 + -1.7 5,688,271 + +1.6 5,688,271 + -2.1 5,688,271 + -1.4 5,688,271 + -0.6 5,688,271 + +1.0 5,688,271 + +2.0 5,688,271 + -1.7 5,688,271 + -1.3 5,688,272 - -2.0 5,688,272 - -2.1 5,688,272 - +3.0 5,688,272 - +1.7 5,688,272 - +3.9 5,688,272 - -1.3 5,688,318 + +2.3 5,688,318 + +1.8 5,688,318 + +3.0 5,688,318 + +1.6 5,688,319 - -1.9 5,688,319 - -2.4 5,688,319 - -0.6 5,688,319 - +0.0 5,688,373 + -1.5 5,688,373 + +1.1 5,688,374 - -0.4 5,688,374 - +0.0 5,688,384 - -1.6 5,688,384 - +1.0 5,688,530 - Psyr_4799 0.11 +0.5 5,688,569 + Psyr_4799 0.14 -0.0 5,688,597 + Psyr_4799 0.16 -1.4 5,688,632 + Psyr_4799 0.19 -1.0 5,688,931 + Psyr_4799 0.40 +1.0 5,688,931 + Psyr_4799 0.40 +4.2 5,688,931 + Psyr_4799 0.40 +3.5 5,688,932 - Psyr_4799 0.40 +0.9 5,688,932 - Psyr_4799 0.40 +3.5 5,689,273 + Psyr_4799 0.65 +3.2 5,689,274 - Psyr_4799 0.65 -2.5 5,689,274 - Psyr_4799 0.65 +0.5 5,689,274 - Psyr_4799 0.65 +0.0 5,689,274 - Psyr_4799 0.65 +0.5 5,689,455 + Psyr_4799 0.78 -2.0 5,689,455 + Psyr_4799 0.78 -1.7 5,689,455 + Psyr_4799 0.78 -3.0 5,689,455 + Psyr_4799 0.78 +0.6 5,689,455 + Psyr_4799 0.78 -3.0 5,689,455 + Psyr_4799 0.78 +1.0 5,689,456 - Psyr_4799 0.78 -1.0 5,689,456 - Psyr_4799 0.78 +0.7 5,689,456 - Psyr_4799 0.78 +1.6 5,689,456 - Psyr_4799 0.78 +1.5 5,689,461 - Psyr_4799 0.78 -4.1 5,689,647 + -2.2 5,689,647 + +2.4 5,689,647 + +0.0 5,689,647 + +3.2 5,689,647 + +3.2 5,689,647 + +1.0 5,689,647 + +1.6 5,689,648 - -0.1 5,689,648 - -0.1 5,689,648 - +2.8 5,689,648 - -1.2 5,689,648 - -0.7 5,689,648 - -2.1 5,689,648 - +2.8 5,689,648 - +0.0 5,689,648 - +2.8 5,689,648 - +2.0 5,689,648 - -0.1 5,689,648 - +0.2 5,689,648 - -2.5 5,689,648 - +0.4 5,689,648 - +2.6 5,689,673 + +3.3 5,689,674 - -2.0 5,689,674 - -1.1 5,689,674 - +2.6 5,689,674 - +2.6 5,689,674 - -1.2 5,689,674 - -2.5 5,689,674 - -1.7 5,689,674 - -2.8 5,689,676 - -2.2 5,689,676 - +0.0 5,689,676 - +0.2 5,689,779 - -4.1 5,690,145 + Psyr_4800 0.57 +0.0 5,690,146 - Psyr_4800 0.57 +1.6 5,690,146 - Psyr_4800 0.57 -0.9 5,690,301 + Psyr_4800 0.80 -3.1 5,690,301 + Psyr_4800 0.80 +2.8 5,690,322 + Psyr_4800 0.83 -2.9 5,690,322 + Psyr_4800 0.83 -1.9 5,690,322 + Psyr_4800 0.83 +3.0 5,690,322 + Psyr_4800 0.83 -2.2 5,690,322 + Psyr_4800 0.83 -1.4 5,690,322 + Psyr_4800 0.83 +2.8 5,690,323 - Psyr_4800 0.83 +3.2 5,690,323 - Psyr_4800 0.83 -1.3 5,690,323 - Psyr_4800 0.83 -1.0 5,690,323 - Psyr_4800 0.83 -2.5 5,690,324 + Psyr_4800 0.84 +2.0 5,690,325 - Psyr_4800 0.84 -1.6 5,690,325 - Psyr_4800 0.84 +0.0 5,690,325 - Psyr_4800 0.84 +2.8 5,690,325 - Psyr_4800 0.84 -0.8 5,690,391 + -1.5 5,690,391 + -1.4 5,690,391 + -1.9 5,690,392 - -3.4 5,690,392 - +0.8 5,690,392 - +0.0 5,690,392 - -2.1 5,690,417 + +2.3 5,690,418 - +1.6 5,690,420 + -0.5 5,690,420 + +3.8 5,690,420 + -1.7 5,690,421 - +3.3 5,690,421 - -0.2 5,690,421 - -2.1 5,690,421 - +2.0 5,690,483 + -1.2 5,690,483 + +3.8 5,690,484 - -1.4 5,690,523 + -3.7 5,690,546 + -1.0 5,690,547 - +1.6 5,690,560 + -1.2 5,690,561 - +3.2 5,690,561 - +0.6 5,690,603 + -3.3 5,690,604 - +3.9 5,690,604 - -0.6 5,690,604 - +2.8 5,690,604 - -0.9 5,690,604 - +0.1 5,690,648 + +1.0 5,690,648 + -1.7 5,690,648 + -1.8 5,690,648 + +2.8 5,690,648 + -0.8 5,690,649 - -2.4 5,690,649 - -2.8
Or see this region's nucleotide sequence