Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4582 and Psyr_4583 are separated by 11 nucleotides Psyr_4583 and Psyr_4584 are separated by 114 nucleotides Psyr_4584 and Psyr_4585 are separated by 7 nucleotides
Psyr_4582: Psyr_4582 - hypothetical protein, at 5,444,061 to 5,444,558
_4582
Psyr_4583: Psyr_4583 - Glycoside hydrolase, family 19, at 5,444,570 to 5,445,115
_4583
Psyr_4584: Psyr_4584 - Protein of unknown function DUF144, at 5,445,230 to 5,445,796
_4584
Psyr_4585: Psyr_4585 - hypothetical protein, at 5,445,804 to 5,447,126
_4585
Position (kb) 5445
5446 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2
3
4 at 5444.513 kb on + strand at 5444.513 kb on + strand at 5444.513 kb on + strand at 5444.514 kb on - strand at 5444.558 kb on + strand at 5444.599 kb on - strand at 5444.799 kb on + strand, within Psyr_4583 at 5444.800 kb on - strand, within Psyr_4583 at 5444.800 kb on - strand, within Psyr_4583 at 5444.800 kb on - strand, within Psyr_4583 at 5444.907 kb on + strand, within Psyr_4583 at 5444.907 kb on + strand, within Psyr_4583 at 5444.908 kb on - strand, within Psyr_4583 at 5444.919 kb on + strand, within Psyr_4583 at 5444.919 kb on + strand, within Psyr_4583 at 5444.919 kb on + strand, within Psyr_4583 at 5444.919 kb on + strand, within Psyr_4583 at 5444.920 kb on - strand, within Psyr_4583 at 5444.920 kb on - strand, within Psyr_4583 at 5444.933 kb on + strand, within Psyr_4583 at 5444.934 kb on - strand, within Psyr_4583 at 5444.946 kb on + strand, within Psyr_4583 at 5444.946 kb on + strand, within Psyr_4583 at 5444.947 kb on - strand, within Psyr_4583 at 5444.947 kb on - strand, within Psyr_4583 at 5444.947 kb on - strand, within Psyr_4583 at 5444.972 kb on + strand, within Psyr_4583 at 5444.973 kb on - strand, within Psyr_4583 at 5444.973 kb on - strand, within Psyr_4583 at 5445.092 kb on + strand at 5445.092 kb on + strand at 5445.101 kb on + strand at 5445.129 kb on - strand at 5445.141 kb on + strand at 5445.155 kb on - strand at 5445.168 kb on + strand at 5445.187 kb on - strand at 5445.187 kb on - strand at 5445.233 kb on + strand at 5445.233 kb on + strand at 5445.233 kb on + strand at 5445.233 kb on + strand at 5445.234 kb on - strand at 5445.234 kb on - strand at 5445.234 kb on - strand at 5445.234 kb on - strand at 5445.234 kb on - strand at 5445.234 kb on - strand at 5445.322 kb on - strand, within Psyr_4584 at 5445.322 kb on - strand, within Psyr_4584 at 5445.385 kb on - strand, within Psyr_4584 at 5445.400 kb on + strand, within Psyr_4584 at 5445.400 kb on + strand, within Psyr_4584 at 5445.400 kb on + strand, within Psyr_4584 at 5445.400 kb on + strand, within Psyr_4584 at 5445.401 kb on - strand, within Psyr_4584 at 5445.401 kb on - strand, within Psyr_4584 at 5445.401 kb on - strand, within Psyr_4584 at 5445.401 kb on - strand, within Psyr_4584 at 5445.401 kb on - strand, within Psyr_4584 at 5445.401 kb on - strand, within Psyr_4584 at 5445.401 kb on - strand, within Psyr_4584 at 5445.419 kb on + strand, within Psyr_4584 at 5445.420 kb on - strand, within Psyr_4584 at 5445.455 kb on + strand, within Psyr_4584 at 5445.456 kb on - strand, within Psyr_4584 at 5445.510 kb on + strand, within Psyr_4584 at 5445.510 kb on + strand, within Psyr_4584 at 5445.511 kb on - strand, within Psyr_4584 at 5445.511 kb on - strand, within Psyr_4584 at 5445.511 kb on - strand, within Psyr_4584 at 5445.511 kb on - strand, within Psyr_4584 at 5445.513 kb on + strand, within Psyr_4584 at 5445.513 kb on + strand, within Psyr_4584 at 5445.513 kb on + strand, within Psyr_4584 at 5445.513 kb on + strand, within Psyr_4584 at 5445.514 kb on - strand, within Psyr_4584 at 5445.514 kb on - strand, within Psyr_4584 at 5445.514 kb on - strand, within Psyr_4584 at 5445.514 kb on - strand, within Psyr_4584 at 5445.514 kb on - strand, within Psyr_4584 at 5445.514 kb on - strand, within Psyr_4584 at 5445.514 kb on - strand, within Psyr_4584 at 5445.600 kb on + strand, within Psyr_4584 at 5445.709 kb on + strand, within Psyr_4584 at 5445.709 kb on + strand, within Psyr_4584 at 5445.710 kb on - strand, within Psyr_4584 at 5445.779 kb on + strand at 5445.779 kb on + strand at 5445.779 kb on + strand at 5445.779 kb on + strand at 5445.780 kb on - strand at 5445.780 kb on - strand at 5445.780 kb on - strand at 5445.786 kb on + strand at 5445.786 kb on + strand at 5445.786 kb on + strand at 5445.786 kb on + strand at 5445.786 kb on + strand at 5445.786 kb on + strand at 5445.786 kb on + strand at 5445.786 kb on + strand at 5445.786 kb on + strand at 5445.787 kb on - strand at 5445.787 kb on - strand at 5445.787 kb on - strand at 5445.787 kb on - strand at 5445.790 kb on + strand at 5445.791 kb on - strand at 5445.791 kb on - strand at 5445.791 kb on - strand at 5445.791 kb on - strand at 5445.796 kb on + strand at 5445.796 kb on + strand at 5445.796 kb on + strand at 5445.797 kb on - strand at 5445.797 kb on - strand at 5445.797 kb on - strand at 5445.900 kb on + strand at 5445.917 kb on + strand at 5445.928 kb on + strand at 5445.928 kb on + strand at 5445.929 kb on - strand at 5445.933 kb on + strand at 5445.933 kb on + strand at 5445.933 kb on + strand at 5445.933 kb on + strand at 5445.934 kb on - strand at 5445.934 kb on - strand at 5445.934 kb on - strand at 5445.934 kb on - strand at 5445.934 kb on - strand at 5445.951 kb on + strand, within Psyr_4585 at 5445.992 kb on + strand, within Psyr_4585 at 5445.992 kb on + strand, within Psyr_4585 at 5445.992 kb on + strand, within Psyr_4585 at 5445.992 kb on + strand, within Psyr_4585 at 5445.992 kb on + strand, within Psyr_4585 at 5445.995 kb on + strand, within Psyr_4585 at 5445.995 kb on + strand, within Psyr_4585 at 5445.995 kb on + strand, within Psyr_4585 at 5445.996 kb on - strand, within Psyr_4585 at 5446.034 kb on - strand, within Psyr_4585 at 5446.034 kb on - strand, within Psyr_4585 at 5446.124 kb on + strand, within Psyr_4585 at 5446.249 kb on + strand, within Psyr_4585 at 5446.250 kb on - strand, within Psyr_4585 at 5446.352 kb on + strand, within Psyr_4585 at 5446.352 kb on + strand, within Psyr_4585 at 5446.352 kb on + strand, within Psyr_4585 at 5446.352 kb on + strand, within Psyr_4585 at 5446.352 kb on + strand, within Psyr_4585 at 5446.352 kb on + strand, within Psyr_4585 at 5446.352 kb on + strand, within Psyr_4585 at 5446.352 kb on + strand, within Psyr_4585 at 5446.352 kb on + strand, within Psyr_4585 at 5446.352 kb on + strand, within Psyr_4585 at 5446.352 kb on + strand, within Psyr_4585 at 5446.352 kb on + strand, within Psyr_4585 at 5446.352 kb on + strand, within Psyr_4585 at 5446.352 kb on + strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.353 kb on - strand, within Psyr_4585 at 5446.401 kb on + strand, within Psyr_4585 at 5446.401 kb on + strand, within Psyr_4585 at 5446.460 kb on + strand, within Psyr_4585 at 5446.491 kb on + strand, within Psyr_4585 at 5446.491 kb on + strand, within Psyr_4585 at 5446.491 kb on + strand, within Psyr_4585 at 5446.491 kb on + strand, within Psyr_4585 at 5446.492 kb on - strand, within Psyr_4585 at 5446.590 kb on + strand, within Psyr_4585 at 5446.637 kb on + strand, within Psyr_4585 at 5446.637 kb on + strand, within Psyr_4585 at 5446.725 kb on + strand, within Psyr_4585 at 5446.725 kb on + strand, within Psyr_4585 at 5446.725 kb on + strand, within Psyr_4585 at 5446.726 kb on - strand, within Psyr_4585 at 5446.726 kb on - strand, within Psyr_4585 at 5446.756 kb on + strand, within Psyr_4585 at 5446.756 kb on + strand, within Psyr_4585 at 5446.756 kb on + strand, within Psyr_4585 at 5446.756 kb on + strand, within Psyr_4585 at 5446.756 kb on + strand, within Psyr_4585 at 5446.756 kb on + strand, within Psyr_4585 at 5446.756 kb on + strand, within Psyr_4585 at 5446.757 kb on - strand, within Psyr_4585 at 5446.757 kb on - strand, within Psyr_4585 at 5446.757 kb on - strand, within Psyr_4585 at 5446.757 kb on - strand, within Psyr_4585 at 5446.757 kb on - strand, within Psyr_4585
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 5,444,513 + -1.6 5,444,513 + +1.6 5,444,513 + +0.0 5,444,514 - +4.6 5,444,558 + +4.2 5,444,599 - +2.0 5,444,799 + Psyr_4583 0.42 +0.0 5,444,800 - Psyr_4583 0.42 -0.6 5,444,800 - Psyr_4583 0.42 +3.7 5,444,800 - Psyr_4583 0.42 +1.2 5,444,907 + Psyr_4583 0.62 +1.2 5,444,907 + Psyr_4583 0.62 +0.2 5,444,908 - Psyr_4583 0.62 -2.8 5,444,919 + Psyr_4583 0.64 +0.4 5,444,919 + Psyr_4583 0.64 +1.3 5,444,919 + Psyr_4583 0.64 -0.1 5,444,919 + Psyr_4583 0.64 +1.2 5,444,920 - Psyr_4583 0.64 +4.5 5,444,920 - Psyr_4583 0.64 +2.3 5,444,933 + Psyr_4583 0.66 +4.3 5,444,934 - Psyr_4583 0.67 +1.6 5,444,946 + Psyr_4583 0.69 +0.7 5,444,946 + Psyr_4583 0.69 +0.8 5,444,947 - Psyr_4583 0.69 +0.0 5,444,947 - Psyr_4583 0.69 -0.4 5,444,947 - Psyr_4583 0.69 +1.3 5,444,972 + Psyr_4583 0.74 -1.3 5,444,973 - Psyr_4583 0.74 -2.3 5,444,973 - Psyr_4583 0.74 -2.8 5,445,092 + -4.6 5,445,092 + -1.3 5,445,101 + +0.0 5,445,129 - -0.9 5,445,141 + -1.0 5,445,155 - -0.9 5,445,168 + -3.5 5,445,187 - -2.3 5,445,187 - -2.0 5,445,233 + -0.3 5,445,233 + -1.2 5,445,233 + +0.6 5,445,233 + +1.0 5,445,234 - -1.6 5,445,234 - -0.3 5,445,234 - -1.5 5,445,234 - -0.4 5,445,234 - +0.9 5,445,234 - +1.0 5,445,322 - Psyr_4584 0.16 -0.9 5,445,322 - Psyr_4584 0.16 -2.3 5,445,385 - Psyr_4584 0.27 -1.9 5,445,400 + Psyr_4584 0.30 -1.4 5,445,400 + Psyr_4584 0.30 +0.5 5,445,400 + Psyr_4584 0.30 -0.1 5,445,400 + Psyr_4584 0.30 -2.0 5,445,401 - Psyr_4584 0.30 +1.2 5,445,401 - Psyr_4584 0.30 -5.7 5,445,401 - Psyr_4584 0.30 +0.3 5,445,401 - Psyr_4584 0.30 -2.2 5,445,401 - Psyr_4584 0.30 -1.8 5,445,401 - Psyr_4584 0.30 -0.7 5,445,401 - Psyr_4584 0.30 +1.0 5,445,419 + Psyr_4584 0.33 -2.5 5,445,420 - Psyr_4584 0.34 -2.6 5,445,455 + Psyr_4584 0.40 +2.0 5,445,456 - Psyr_4584 0.40 -0.8 5,445,510 + Psyr_4584 0.49 -1.5 5,445,510 + Psyr_4584 0.49 -1.6 5,445,511 - Psyr_4584 0.50 -0.2 5,445,511 - Psyr_4584 0.50 +1.6 5,445,511 - Psyr_4584 0.50 -0.8 5,445,511 - Psyr_4584 0.50 +4.2 5,445,513 + Psyr_4584 0.50 -0.5 5,445,513 + Psyr_4584 0.50 -5.0 5,445,513 + Psyr_4584 0.50 +0.0 5,445,513 + Psyr_4584 0.50 -4.2 5,445,514 - Psyr_4584 0.50 -2.2 5,445,514 - Psyr_4584 0.50 +0.3 5,445,514 - Psyr_4584 0.50 +4.0 5,445,514 - Psyr_4584 0.50 -2.3 5,445,514 - Psyr_4584 0.50 +0.0 5,445,514 - Psyr_4584 0.50 +1.6 5,445,514 - Psyr_4584 0.50 -1.2 5,445,600 + Psyr_4584 0.65 +1.0 5,445,709 + Psyr_4584 0.84 -0.1 5,445,709 + Psyr_4584 0.84 +0.1 5,445,710 - Psyr_4584 0.85 -0.1 5,445,779 + +2.8 5,445,779 + +2.0 5,445,779 + -3.8 5,445,779 + -2.1 5,445,780 - -0.2 5,445,780 - -2.1 5,445,780 - -2.2 5,445,786 + -3.9 5,445,786 + -2.5 5,445,786 + +4.5 5,445,786 + -4.4 5,445,786 + +4.1 5,445,786 + -2.7 5,445,786 + -1.4 5,445,786 + -1.9 5,445,786 + -2.5 5,445,787 - -1.3 5,445,787 - -4.3 5,445,787 - +4.6 5,445,787 - -1.1 5,445,790 + -2.8 5,445,791 - -2.8 5,445,791 - +0.0 5,445,791 - -3.1 5,445,791 - -4.8 5,445,796 + -2.1 5,445,796 + +0.0 5,445,796 + -1.7 5,445,797 - -3.3 5,445,797 - +0.0 5,445,797 - +4.0 5,445,900 + -2.1 5,445,917 + -3.4 5,445,928 + +1.6 5,445,928 + -2.8 5,445,929 - -0.3 5,445,933 + +1.6 5,445,933 + -1.1 5,445,933 + +0.7 5,445,933 + -3.8 5,445,934 - +3.2 5,445,934 - -2.5 5,445,934 - -3.0 5,445,934 - -1.3 5,445,934 - -5.0 5,445,951 + Psyr_4585 0.11 +2.0 5,445,992 + Psyr_4585 0.14 -2.0 5,445,992 + Psyr_4585 0.14 +0.0 5,445,992 + Psyr_4585 0.14 +1.0 5,445,992 + Psyr_4585 0.14 -0.7 5,445,992 + Psyr_4585 0.14 -3.5 5,445,995 + Psyr_4585 0.14 +1.6 5,445,995 + Psyr_4585 0.14 -0.5 5,445,995 + Psyr_4585 0.14 -2.1 5,445,996 - Psyr_4585 0.15 -1.5 5,446,034 - Psyr_4585 0.17 -3.1 5,446,034 - Psyr_4585 0.17 -2.0 5,446,124 + Psyr_4585 0.24 -2.2 5,446,249 + Psyr_4585 0.34 -1.3 5,446,250 - Psyr_4585 0.34 +0.0 5,446,352 + Psyr_4585 0.41 +3.2 5,446,352 + Psyr_4585 0.41 -0.5 5,446,352 + Psyr_4585 0.41 +3.2 5,446,352 + Psyr_4585 0.41 -1.2 5,446,352 + Psyr_4585 0.41 +0.0 5,446,352 + Psyr_4585 0.41 -1.6 5,446,352 + Psyr_4585 0.41 -2.3 5,446,352 + Psyr_4585 0.41 -1.2 5,446,352 + Psyr_4585 0.41 -1.5 5,446,352 + Psyr_4585 0.41 -3.8 5,446,352 + Psyr_4585 0.41 +1.2 5,446,352 + Psyr_4585 0.41 -2.0 5,446,352 + Psyr_4585 0.41 -2.9 5,446,352 + Psyr_4585 0.41 +3.5 5,446,353 - Psyr_4585 0.41 -2.5 5,446,353 - Psyr_4585 0.41 +1.0 5,446,353 - Psyr_4585 0.41 -3.0 5,446,353 - Psyr_4585 0.41 -1.4 5,446,353 - Psyr_4585 0.41 -3.9 5,446,353 - Psyr_4585 0.41 -1.8 5,446,353 - Psyr_4585 0.41 -1.4 5,446,353 - Psyr_4585 0.41 +0.0 5,446,353 - Psyr_4585 0.41 -2.5 5,446,353 - Psyr_4585 0.41 -2.9 5,446,353 - Psyr_4585 0.41 +0.7 5,446,353 - Psyr_4585 0.41 -5.0 5,446,353 - Psyr_4585 0.41 -0.6 5,446,353 - Psyr_4585 0.41 -0.8 5,446,353 - Psyr_4585 0.41 -5.8 5,446,353 - Psyr_4585 0.41 -5.6 5,446,353 - Psyr_4585 0.41 +0.0 5,446,353 - Psyr_4585 0.41 +2.8 5,446,401 + Psyr_4585 0.45 -0.5 5,446,401 + Psyr_4585 0.45 +0.0 5,446,460 + Psyr_4585 0.50 -0.3 5,446,491 + Psyr_4585 0.52 +3.2 5,446,491 + Psyr_4585 0.52 +3.7 5,446,491 + Psyr_4585 0.52 +1.6 5,446,491 + Psyr_4585 0.52 +3.9 5,446,492 - Psyr_4585 0.52 -1.5 5,446,590 + Psyr_4585 0.59 -0.8 5,446,637 + Psyr_4585 0.63 -3.2 5,446,637 + Psyr_4585 0.63 +0.4 5,446,725 + Psyr_4585 0.70 +3.0 5,446,725 + Psyr_4585 0.70 +0.6 5,446,725 + Psyr_4585 0.70 -1.2 5,446,726 - Psyr_4585 0.70 -0.3 5,446,726 - Psyr_4585 0.70 -0.3 5,446,756 + Psyr_4585 0.72 -3.5 5,446,756 + Psyr_4585 0.72 -1.2 5,446,756 + Psyr_4585 0.72 -0.5 5,446,756 + Psyr_4585 0.72 -0.2 5,446,756 + Psyr_4585 0.72 -2.1 5,446,756 + Psyr_4585 0.72 +0.0 5,446,756 + Psyr_4585 0.72 +2.6 5,446,757 - Psyr_4585 0.72 -1.0 5,446,757 - Psyr_4585 0.72 -1.6 5,446,757 - Psyr_4585 0.72 +1.0 5,446,757 - Psyr_4585 0.72 -2.1 5,446,757 - Psyr_4585 0.72 -3.6
Or see this region's nucleotide sequence