Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4494 and Psyr_4495 are separated by 282 nucleotides Psyr_4495 and Psyr_4496 are separated by 230 nucleotides
Psyr_4494: Psyr_4494 - ABC-type phosphate/phosphonate transport system periplasmic component-like protein, at 5,357,037 to 5,357,888
_4494
Psyr_4495: Psyr_4495 - Beta-lactamase, at 5,358,171 to 5,359,076
_4495
Psyr_4496: Psyr_4496 - outer membrane transport energization protein TonB, at 5,359,307 to 5,360,020
_4496
Position (kb) 5358
5359
5360 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5 at 5357.225 kb on + strand, within Psyr_4494 at 5357.254 kb on - strand, within Psyr_4494 at 5357.322 kb on + strand, within Psyr_4494 at 5357.322 kb on + strand, within Psyr_4494 at 5357.358 kb on - strand, within Psyr_4494 at 5357.408 kb on + strand, within Psyr_4494 at 5357.408 kb on + strand, within Psyr_4494 at 5357.408 kb on + strand, within Psyr_4494 at 5357.409 kb on - strand, within Psyr_4494 at 5357.409 kb on - strand, within Psyr_4494 at 5357.409 kb on - strand, within Psyr_4494 at 5357.409 kb on - strand, within Psyr_4494 at 5357.414 kb on + strand, within Psyr_4494 at 5357.414 kb on + strand, within Psyr_4494 at 5357.414 kb on + strand, within Psyr_4494 at 5357.414 kb on + strand, within Psyr_4494 at 5357.414 kb on + strand, within Psyr_4494 at 5357.414 kb on + strand, within Psyr_4494 at 5357.414 kb on + strand, within Psyr_4494 at 5357.414 kb on + strand, within Psyr_4494 at 5357.414 kb on + strand, within Psyr_4494 at 5357.415 kb on - strand, within Psyr_4494 at 5357.415 kb on - strand, within Psyr_4494 at 5357.415 kb on - strand, within Psyr_4494 at 5357.415 kb on - strand, within Psyr_4494 at 5357.415 kb on - strand, within Psyr_4494 at 5357.415 kb on - strand, within Psyr_4494 at 5357.415 kb on - strand, within Psyr_4494 at 5357.415 kb on - strand, within Psyr_4494 at 5357.415 kb on - strand, within Psyr_4494 at 5357.415 kb on - strand, within Psyr_4494 at 5357.415 kb on - strand, within Psyr_4494 at 5357.415 kb on - strand, within Psyr_4494 at 5357.415 kb on - strand, within Psyr_4494 at 5357.453 kb on + strand, within Psyr_4494 at 5357.453 kb on + strand, within Psyr_4494 at 5357.453 kb on + strand, within Psyr_4494 at 5357.453 kb on + strand, within Psyr_4494 at 5357.454 kb on - strand, within Psyr_4494 at 5357.502 kb on + strand, within Psyr_4494 at 5357.662 kb on + strand, within Psyr_4494 at 5357.662 kb on + strand, within Psyr_4494 at 5357.663 kb on - strand, within Psyr_4494 at 5357.663 kb on - strand, within Psyr_4494 at 5357.663 kb on - strand, within Psyr_4494 at 5357.663 kb on - strand, within Psyr_4494 at 5357.731 kb on + strand, within Psyr_4494 at 5357.731 kb on + strand, within Psyr_4494 at 5357.732 kb on - strand, within Psyr_4494 at 5357.732 kb on - strand, within Psyr_4494 at 5357.732 kb on - strand, within Psyr_4494 at 5357.732 kb on - strand, within Psyr_4494 at 5357.732 kb on - strand, within Psyr_4494 at 5357.736 kb on + strand, within Psyr_4494 at 5357.736 kb on + strand, within Psyr_4494 at 5357.737 kb on - strand, within Psyr_4494 at 5357.808 kb on - strand at 5357.862 kb on - strand at 5357.862 kb on - strand at 5357.881 kb on - strand at 5357.907 kb on + strand at 5357.908 kb on - strand at 5357.908 kb on - strand at 5357.908 kb on - strand at 5357.908 kb on - strand at 5357.916 kb on - strand at 5357.943 kb on + strand at 5357.943 kb on + strand at 5357.962 kb on + strand at 5357.986 kb on + strand at 5357.990 kb on + strand at 5358.005 kb on + strand at 5358.006 kb on - strand at 5358.076 kb on + strand at 5358.076 kb on + strand at 5358.076 kb on + strand at 5358.077 kb on - strand at 5358.077 kb on - strand at 5358.080 kb on - strand at 5358.080 kb on - strand at 5358.080 kb on - strand at 5358.080 kb on - strand at 5358.118 kb on + strand at 5358.119 kb on - strand at 5358.248 kb on + strand at 5358.248 kb on + strand at 5358.277 kb on + strand, within Psyr_4495 at 5358.350 kb on - strand, within Psyr_4495 at 5358.350 kb on - strand, within Psyr_4495 at 5358.350 kb on - strand, within Psyr_4495 at 5358.396 kb on + strand, within Psyr_4495 at 5358.397 kb on - strand, within Psyr_4495 at 5358.397 kb on - strand, within Psyr_4495 at 5358.535 kb on + strand, within Psyr_4495 at 5358.535 kb on + strand, within Psyr_4495 at 5358.623 kb on + strand, within Psyr_4495 at 5358.640 kb on + strand, within Psyr_4495 at 5358.662 kb on + strand, within Psyr_4495 at 5358.662 kb on + strand, within Psyr_4495 at 5358.662 kb on + strand, within Psyr_4495 at 5358.662 kb on + strand, within Psyr_4495 at 5358.672 kb on + strand, within Psyr_4495 at 5358.672 kb on + strand, within Psyr_4495 at 5358.672 kb on + strand, within Psyr_4495 at 5358.672 kb on + strand, within Psyr_4495 at 5358.673 kb on - strand, within Psyr_4495 at 5358.673 kb on - strand, within Psyr_4495 at 5358.673 kb on - strand, within Psyr_4495 at 5358.690 kb on + strand, within Psyr_4495 at 5358.886 kb on - strand, within Psyr_4495 at 5358.936 kb on + strand, within Psyr_4495 at 5359.031 kb on + strand at 5359.031 kb on + strand at 5359.031 kb on + strand at 5359.031 kb on + strand at 5359.031 kb on + strand at 5359.031 kb on + strand at 5359.031 kb on + strand at 5359.031 kb on + strand at 5359.031 kb on + strand at 5359.031 kb on + strand at 5359.031 kb on + strand at 5359.032 kb on - strand at 5359.032 kb on - strand at 5359.032 kb on - strand at 5359.032 kb on - strand at 5359.032 kb on - strand at 5359.032 kb on - strand at 5359.032 kb on - strand at 5359.087 kb on + strand at 5359.087 kb on + strand at 5359.087 kb on + strand at 5359.110 kb on - strand at 5359.156 kb on - strand at 5359.156 kb on - strand at 5359.162 kb on + strand at 5359.163 kb on - strand at 5359.180 kb on + strand at 5359.181 kb on - strand at 5359.181 kb on - strand at 5359.181 kb on - strand at 5359.181 kb on - strand at 5359.181 kb on - strand at 5359.181 kb on - strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.200 kb on + strand at 5359.201 kb on - strand at 5359.201 kb on - strand at 5359.201 kb on - strand at 5359.201 kb on - strand at 5359.201 kb on - strand at 5359.201 kb on - strand at 5359.201 kb on - strand at 5359.201 kb on - strand at 5359.201 kb on - strand at 5359.201 kb on - strand at 5359.201 kb on - strand at 5359.201 kb on - strand at 5359.202 kb on + strand at 5359.202 kb on + strand at 5359.202 kb on + strand at 5359.203 kb on - strand at 5359.415 kb on - strand, within Psyr_4496 at 5359.415 kb on - strand, within Psyr_4496 at 5359.415 kb on - strand, within Psyr_4496 at 5359.415 kb on - strand, within Psyr_4496 at 5359.480 kb on + strand, within Psyr_4496 at 5359.480 kb on + strand, within Psyr_4496 at 5359.480 kb on + strand, within Psyr_4496 at 5359.480 kb on + strand, within Psyr_4496 at 5359.480 kb on + strand, within Psyr_4496 at 5359.480 kb on + strand, within Psyr_4496 at 5359.481 kb on - strand, within Psyr_4496 at 5359.481 kb on - strand, within Psyr_4496 at 5359.481 kb on - strand, within Psyr_4496 at 5359.484 kb on + strand, within Psyr_4496 at 5359.484 kb on + strand, within Psyr_4496 at 5359.484 kb on + strand, within Psyr_4496 at 5359.484 kb on + strand, within Psyr_4496 at 5359.485 kb on - strand, within Psyr_4496 at 5359.485 kb on - strand, within Psyr_4496 at 5359.705 kb on - strand, within Psyr_4496 at 5359.763 kb on + strand, within Psyr_4496 at 5359.764 kb on - strand, within Psyr_4496 at 5359.881 kb on + strand, within Psyr_4496 at 5359.881 kb on + strand, within Psyr_4496 at 5359.882 kb on - strand, within Psyr_4496 at 5359.882 kb on - strand, within Psyr_4496 at 5359.882 kb on - strand, within Psyr_4496 at 5359.882 kb on - strand, within Psyr_4496 at 5359.982 kb on + strand at 5359.982 kb on + strand at 5359.982 kb on + strand at 5359.983 kb on - strand at 5360.018 kb on + strand at 5360.018 kb on + strand at 5360.019 kb on - strand at 5360.019 kb on - strand at 5360.019 kb on - strand at 5360.019 kb on - strand at 5360.035 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 5,357,225 + Psyr_4494 0.22 -0.6 5,357,254 - Psyr_4494 0.25 -2.4 5,357,322 + Psyr_4494 0.33 +3.7 5,357,322 + Psyr_4494 0.33 -2.2 5,357,358 - Psyr_4494 0.38 +4.3 5,357,408 + Psyr_4494 0.44 -2.1 5,357,408 + Psyr_4494 0.44 +2.6 5,357,408 + Psyr_4494 0.44 -4.6 5,357,409 - Psyr_4494 0.44 +0.0 5,357,409 - Psyr_4494 0.44 +0.8 5,357,409 - Psyr_4494 0.44 +1.0 5,357,409 - Psyr_4494 0.44 -0.2 5,357,414 + Psyr_4494 0.44 +0.8 5,357,414 + Psyr_4494 0.44 +2.3 5,357,414 + Psyr_4494 0.44 +0.0 5,357,414 + Psyr_4494 0.44 +0.0 5,357,414 + Psyr_4494 0.44 +2.0 5,357,414 + Psyr_4494 0.44 +1.6 5,357,414 + Psyr_4494 0.44 +2.6 5,357,414 + Psyr_4494 0.44 -1.3 5,357,414 + Psyr_4494 0.44 -0.7 5,357,415 - Psyr_4494 0.44 +2.0 5,357,415 - Psyr_4494 0.44 -2.6 5,357,415 - Psyr_4494 0.44 -0.5 5,357,415 - Psyr_4494 0.44 +3.7 5,357,415 - Psyr_4494 0.44 -1.1 5,357,415 - Psyr_4494 0.44 -1.0 5,357,415 - Psyr_4494 0.44 -2.2 5,357,415 - Psyr_4494 0.44 -2.4 5,357,415 - Psyr_4494 0.44 +3.0 5,357,415 - Psyr_4494 0.44 +3.0 5,357,415 - Psyr_4494 0.44 +0.0 5,357,415 - Psyr_4494 0.44 -0.9 5,357,415 - Psyr_4494 0.44 +0.1 5,357,453 + Psyr_4494 0.49 -2.4 5,357,453 + Psyr_4494 0.49 +3.0 5,357,453 + Psyr_4494 0.49 +2.0 5,357,453 + Psyr_4494 0.49 +1.4 5,357,454 - Psyr_4494 0.49 +1.6 5,357,502 + Psyr_4494 0.55 -1.5 5,357,662 + Psyr_4494 0.73 -3.3 5,357,662 + Psyr_4494 0.73 -1.3 5,357,663 - Psyr_4494 0.73 +0.0 5,357,663 - Psyr_4494 0.73 +2.8 5,357,663 - Psyr_4494 0.73 +3.6 5,357,663 - Psyr_4494 0.73 -0.2 5,357,731 + Psyr_4494 0.81 +1.6 5,357,731 + Psyr_4494 0.81 -3.2 5,357,732 - Psyr_4494 0.82 +2.8 5,357,732 - Psyr_4494 0.82 +3.2 5,357,732 - Psyr_4494 0.82 -3.0 5,357,732 - Psyr_4494 0.82 +2.0 5,357,732 - Psyr_4494 0.82 +0.0 5,357,736 + Psyr_4494 0.82 -1.8 5,357,736 + Psyr_4494 0.82 +3.7 5,357,737 - Psyr_4494 0.82 -2.6 5,357,808 - -3.2 5,357,862 - +1.6 5,357,862 - +3.6 5,357,881 - -3.4 5,357,907 + +1.6 5,357,908 - +2.0 5,357,908 - -0.2 5,357,908 - -3.7 5,357,908 - -1.3 5,357,916 - -3.7 5,357,943 + +2.0 5,357,943 + -2.3 5,357,962 + +0.0 5,357,986 + -1.4 5,357,990 + -1.1 5,358,005 + -0.5 5,358,006 - -0.7 5,358,076 + -0.9 5,358,076 + -1.3 5,358,076 + -0.9 5,358,077 - -3.9 5,358,077 - -2.0 5,358,080 - +2.0 5,358,080 - -2.1 5,358,080 - +2.6 5,358,080 - -0.2 5,358,118 + +2.6 5,358,119 - -0.7 5,358,248 + +1.0 5,358,248 + +0.0 5,358,277 + Psyr_4495 0.12 +5.2 5,358,350 - Psyr_4495 0.20 -1.2 5,358,350 - Psyr_4495 0.20 -2.0 5,358,350 - Psyr_4495 0.20 +3.8 5,358,396 + Psyr_4495 0.25 +4.1 5,358,397 - Psyr_4495 0.25 -1.7 5,358,397 - Psyr_4495 0.25 -1.6 5,358,535 + Psyr_4495 0.40 +0.4 5,358,535 + Psyr_4495 0.40 -1.7 5,358,623 + Psyr_4495 0.50 -1.3 5,358,640 + Psyr_4495 0.52 -2.0 5,358,662 + Psyr_4495 0.54 -4.6 5,358,662 + Psyr_4495 0.54 -1.2 5,358,662 + Psyr_4495 0.54 -1.4 5,358,662 + Psyr_4495 0.54 -0.1 5,358,672 + Psyr_4495 0.55 +4.4 5,358,672 + Psyr_4495 0.55 -2.0 5,358,672 + Psyr_4495 0.55 +0.7 5,358,672 + Psyr_4495 0.55 +4.5 5,358,673 - Psyr_4495 0.55 -3.6 5,358,673 - Psyr_4495 0.55 -1.6 5,358,673 - Psyr_4495 0.55 +0.0 5,358,690 + Psyr_4495 0.57 +0.3 5,358,886 - Psyr_4495 0.79 +0.0 5,358,936 + Psyr_4495 0.84 -2.9 5,359,031 + -3.2 5,359,031 + -2.0 5,359,031 + +2.6 5,359,031 + -1.0 5,359,031 + +0.8 5,359,031 + -3.0 5,359,031 + +2.3 5,359,031 + -1.6 5,359,031 + -1.0 5,359,031 + -1.1 5,359,031 + -0.8 5,359,032 - +0.0 5,359,032 - -2.4 5,359,032 - -2.8 5,359,032 - +0.0 5,359,032 - -3.1 5,359,032 - +0.0 5,359,032 - -0.7 5,359,087 + +2.6 5,359,087 + -2.9 5,359,087 + -1.2 5,359,110 - -1.2 5,359,156 - -4.3 5,359,156 - -1.6 5,359,162 + +1.0 5,359,163 - +1.6 5,359,180 + -1.0 5,359,181 - +2.0 5,359,181 - +3.3 5,359,181 - -0.5 5,359,181 - +2.3 5,359,181 - +1.0 5,359,181 - -2.1 5,359,200 + +1.0 5,359,200 + -1.6 5,359,200 + +0.2 5,359,200 + +0.0 5,359,200 + -3.1 5,359,200 + -0.5 5,359,200 + -1.6 5,359,200 + +2.3 5,359,200 + -1.5 5,359,200 + -4.0 5,359,200 + -2.1 5,359,200 + -0.6 5,359,200 + -4.6 5,359,200 + +1.0 5,359,200 + -1.1 5,359,200 + -1.3 5,359,201 - +0.0 5,359,201 - +0.4 5,359,201 - -1.3 5,359,201 - +1.3 5,359,201 - +3.3 5,359,201 - -5.6 5,359,201 - -1.6 5,359,201 - -0.8 5,359,201 - -3.6 5,359,201 - -2.4 5,359,201 - -2.3 5,359,201 - +2.6 5,359,202 + -1.4 5,359,202 + -2.6 5,359,202 + +1.6 5,359,203 - +3.5 5,359,415 - Psyr_4496 0.15 +1.0 5,359,415 - Psyr_4496 0.15 +0.0 5,359,415 - Psyr_4496 0.15 -0.6 5,359,415 - Psyr_4496 0.15 -1.0 5,359,480 + Psyr_4496 0.24 +0.3 5,359,480 + Psyr_4496 0.24 -2.3 5,359,480 + Psyr_4496 0.24 +2.3 5,359,480 + Psyr_4496 0.24 +0.1 5,359,480 + Psyr_4496 0.24 -1.2 5,359,480 + Psyr_4496 0.24 -0.1 5,359,481 - Psyr_4496 0.24 +1.8 5,359,481 - Psyr_4496 0.24 -1.3 5,359,481 - Psyr_4496 0.24 +0.0 5,359,484 + Psyr_4496 0.25 -1.2 5,359,484 + Psyr_4496 0.25 +0.0 5,359,484 + Psyr_4496 0.25 -0.4 5,359,484 + Psyr_4496 0.25 +2.8 5,359,485 - Psyr_4496 0.25 -3.6 5,359,485 - Psyr_4496 0.25 -2.5 5,359,705 - Psyr_4496 0.56 +0.3 5,359,763 + Psyr_4496 0.64 -3.3 5,359,764 - Psyr_4496 0.64 -0.3 5,359,881 + Psyr_4496 0.80 -0.6 5,359,881 + Psyr_4496 0.80 -1.9 5,359,882 - Psyr_4496 0.81 +0.1 5,359,882 - Psyr_4496 0.81 +4.1 5,359,882 - Psyr_4496 0.81 -0.8 5,359,882 - Psyr_4496 0.81 -0.5 5,359,982 + -1.5 5,359,982 + -1.6 5,359,982 + +0.0 5,359,983 - +4.1 5,360,018 + +3.0 5,360,018 + +0.4 5,360,019 - -0.9 5,360,019 - +1.0 5,360,019 - +2.3 5,360,019 - -2.0 5,360,035 + -0.6
Or see this region's nucleotide sequence