Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4226 and Psyr_4227 are separated by 164 nucleotides Psyr_4227 and Psyr_4228 are separated by 299 nucleotides
Psyr_4226: Psyr_4226 - D-galactonate transporter, at 5,032,887 to 5,034,272
_4226
Psyr_4227: Psyr_4227 - Dihydrodipicolinate synthetase, at 5,034,437 to 5,035,348
_4227
Psyr_4228: Psyr_4228 - transcriptional regulator, GntR family, at 5,035,648 to 5,036,397
_4228
Position (kb) 5034
5035
5036 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5 at 5033.455 kb on + strand, within Psyr_4226 at 5033.455 kb on + strand, within Psyr_4226 at 5033.456 kb on - strand, within Psyr_4226 at 5033.456 kb on - strand, within Psyr_4226 at 5033.482 kb on + strand, within Psyr_4226 at 5033.482 kb on + strand, within Psyr_4226 at 5033.482 kb on + strand, within Psyr_4226 at 5033.483 kb on - strand, within Psyr_4226 at 5033.483 kb on - strand, within Psyr_4226 at 5033.483 kb on - strand, within Psyr_4226 at 5033.483 kb on - strand, within Psyr_4226 at 5033.483 kb on - strand, within Psyr_4226 at 5033.504 kb on - strand, within Psyr_4226 at 5033.515 kb on + strand, within Psyr_4226 at 5033.515 kb on + strand, within Psyr_4226 at 5033.515 kb on + strand, within Psyr_4226 at 5033.515 kb on + strand, within Psyr_4226 at 5033.516 kb on - strand, within Psyr_4226 at 5033.516 kb on - strand, within Psyr_4226 at 5033.516 kb on - strand, within Psyr_4226 at 5033.516 kb on - strand, within Psyr_4226 at 5033.516 kb on - strand, within Psyr_4226 at 5033.519 kb on + strand, within Psyr_4226 at 5033.519 kb on + strand, within Psyr_4226 at 5033.520 kb on - strand, within Psyr_4226 at 5033.531 kb on + strand, within Psyr_4226 at 5033.531 kb on + strand, within Psyr_4226 at 5033.531 kb on + strand, within Psyr_4226 at 5033.531 kb on + strand, within Psyr_4226 at 5033.531 kb on + strand, within Psyr_4226 at 5033.532 kb on - strand, within Psyr_4226 at 5033.532 kb on - strand, within Psyr_4226 at 5033.532 kb on - strand, within Psyr_4226 at 5033.557 kb on + strand, within Psyr_4226 at 5033.557 kb on + strand, within Psyr_4226 at 5033.557 kb on + strand, within Psyr_4226 at 5033.557 kb on + strand, within Psyr_4226 at 5033.558 kb on - strand, within Psyr_4226 at 5033.558 kb on - strand, within Psyr_4226 at 5033.558 kb on - strand, within Psyr_4226 at 5033.558 kb on - strand, within Psyr_4226 at 5033.558 kb on - strand, within Psyr_4226 at 5033.558 kb on - strand, within Psyr_4226 at 5033.558 kb on - strand, within Psyr_4226 at 5033.558 kb on - strand, within Psyr_4226 at 5033.558 kb on - strand, within Psyr_4226 at 5033.558 kb on - strand, within Psyr_4226 at 5033.601 kb on - strand, within Psyr_4226 at 5033.692 kb on + strand, within Psyr_4226 at 5033.693 kb on - strand, within Psyr_4226 at 5033.693 kb on - strand, within Psyr_4226 at 5033.693 kb on - strand, within Psyr_4226 at 5033.767 kb on + strand, within Psyr_4226 at 5033.767 kb on + strand, within Psyr_4226 at 5033.767 kb on + strand, within Psyr_4226 at 5033.768 kb on - strand, within Psyr_4226 at 5033.773 kb on + strand, within Psyr_4226 at 5033.773 kb on + strand, within Psyr_4226 at 5033.774 kb on - strand, within Psyr_4226 at 5033.774 kb on - strand, within Psyr_4226 at 5033.774 kb on - strand, within Psyr_4226 at 5033.818 kb on + strand, within Psyr_4226 at 5033.819 kb on - strand, within Psyr_4226 at 5033.819 kb on - strand, within Psyr_4226 at 5033.986 kb on + strand, within Psyr_4226 at 5033.986 kb on + strand, within Psyr_4226 at 5033.986 kb on + strand, within Psyr_4226 at 5033.986 kb on + strand, within Psyr_4226 at 5033.986 kb on + strand, within Psyr_4226 at 5033.986 kb on + strand, within Psyr_4226 at 5033.986 kb on + strand, within Psyr_4226 at 5033.987 kb on - strand, within Psyr_4226 at 5034.034 kb on + strand, within Psyr_4226 at 5034.035 kb on - strand, within Psyr_4226 at 5034.094 kb on + strand, within Psyr_4226 at 5034.094 kb on + strand, within Psyr_4226 at 5034.094 kb on + strand, within Psyr_4226 at 5034.094 kb on + strand, within Psyr_4226 at 5034.095 kb on - strand, within Psyr_4226 at 5034.095 kb on - strand, within Psyr_4226 at 5034.119 kb on + strand, within Psyr_4226 at 5034.119 kb on + strand, within Psyr_4226 at 5034.119 kb on + strand, within Psyr_4226 at 5034.119 kb on + strand, within Psyr_4226 at 5034.120 kb on - strand, within Psyr_4226 at 5034.120 kb on - strand, within Psyr_4226 at 5034.121 kb on + strand, within Psyr_4226 at 5034.121 kb on + strand, within Psyr_4226 at 5034.121 kb on + strand, within Psyr_4226 at 5034.121 kb on + strand, within Psyr_4226 at 5034.121 kb on + strand, within Psyr_4226 at 5034.121 kb on + strand at 5034.122 kb on - strand, within Psyr_4226 at 5034.122 kb on - strand, within Psyr_4226 at 5034.199 kb on + strand at 5034.200 kb on - strand at 5034.200 kb on - strand at 5034.241 kb on + strand at 5034.275 kb on + strand at 5034.276 kb on - strand at 5034.325 kb on + strand at 5034.438 kb on + strand at 5034.604 kb on - strand, within Psyr_4227 at 5034.627 kb on + strand, within Psyr_4227 at 5034.627 kb on + strand, within Psyr_4227 at 5034.627 kb on + strand, within Psyr_4227 at 5034.628 kb on - strand, within Psyr_4227 at 5034.628 kb on - strand, within Psyr_4227 at 5034.628 kb on - strand, within Psyr_4227 at 5034.628 kb on - strand, within Psyr_4227 at 5034.628 kb on - strand, within Psyr_4227 at 5034.628 kb on - strand, within Psyr_4227 at 5034.628 kb on - strand, within Psyr_4227 at 5034.628 kb on - strand, within Psyr_4227 at 5034.669 kb on + strand, within Psyr_4227 at 5034.669 kb on + strand, within Psyr_4227 at 5034.670 kb on - strand, within Psyr_4227 at 5034.670 kb on - strand, within Psyr_4227 at 5034.718 kb on - strand, within Psyr_4227 at 5034.742 kb on - strand, within Psyr_4227 at 5034.753 kb on + strand, within Psyr_4227 at 5034.754 kb on - strand, within Psyr_4227 at 5034.754 kb on - strand, within Psyr_4227 at 5034.832 kb on + strand, within Psyr_4227 at 5034.927 kb on + strand, within Psyr_4227 at 5034.927 kb on + strand, within Psyr_4227 at 5034.928 kb on - strand, within Psyr_4227 at 5034.928 kb on - strand, within Psyr_4227 at 5034.928 kb on - strand, within Psyr_4227 at 5034.928 kb on - strand, within Psyr_4227 at 5034.928 kb on - strand, within Psyr_4227 at 5035.008 kb on + strand, within Psyr_4227 at 5035.009 kb on - strand, within Psyr_4227 at 5035.009 kb on - strand, within Psyr_4227 at 5035.091 kb on + strand, within Psyr_4227 at 5035.091 kb on + strand, within Psyr_4227 at 5035.092 kb on - strand, within Psyr_4227 at 5035.349 kb on + strand at 5035.349 kb on + strand at 5035.371 kb on + strand at 5035.371 kb on + strand at 5035.371 kb on + strand at 5035.371 kb on + strand at 5035.371 kb on + strand at 5035.371 kb on + strand at 5035.372 kb on - strand at 5035.372 kb on - strand at 5035.372 kb on - strand at 5035.372 kb on - strand at 5035.372 kb on - strand at 5035.372 kb on - strand at 5035.372 kb on - strand at 5035.372 kb on - strand at 5035.372 kb on - strand at 5035.431 kb on - strand at 5035.507 kb on + strand at 5035.507 kb on + strand at 5035.507 kb on + strand at 5035.507 kb on + strand at 5035.507 kb on + strand at 5035.507 kb on + strand at 5035.507 kb on + strand at 5035.507 kb on + strand at 5035.507 kb on + strand at 5035.508 kb on - strand at 5035.508 kb on - strand at 5035.508 kb on - strand at 5035.508 kb on - strand at 5035.508 kb on - strand at 5035.508 kb on - strand at 5035.508 kb on - strand at 5035.508 kb on - strand at 5035.508 kb on - strand at 5035.508 kb on - strand at 5035.508 kb on - strand at 5035.565 kb on + strand at 5035.565 kb on + strand at 5035.565 kb on + strand at 5035.565 kb on + strand at 5035.565 kb on + strand at 5035.566 kb on - strand at 5035.566 kb on - strand at 5035.566 kb on - strand at 5035.585 kb on + strand at 5035.585 kb on + strand at 5035.585 kb on + strand at 5035.585 kb on + strand at 5035.585 kb on + strand at 5035.586 kb on - strand at 5035.800 kb on + strand, within Psyr_4228 at 5035.800 kb on + strand, within Psyr_4228 at 5035.800 kb on + strand, within Psyr_4228 at 5035.800 kb on + strand, within Psyr_4228 at 5035.800 kb on + strand, within Psyr_4228 at 5035.800 kb on + strand, within Psyr_4228 at 5035.800 kb on + strand, within Psyr_4228 at 5035.800 kb on + strand, within Psyr_4228 at 5035.801 kb on - strand, within Psyr_4228 at 5035.801 kb on - strand, within Psyr_4228 at 5035.801 kb on - strand, within Psyr_4228 at 5035.801 kb on - strand, within Psyr_4228 at 5035.801 kb on - strand, within Psyr_4228 at 5035.801 kb on - strand, within Psyr_4228 at 5035.801 kb on - strand, within Psyr_4228 at 5035.802 kb on + strand, within Psyr_4228 at 5035.802 kb on + strand, within Psyr_4228 at 5035.802 kb on + strand, within Psyr_4228 at 5035.802 kb on + strand, within Psyr_4228 at 5035.802 kb on + strand, within Psyr_4228 at 5035.802 kb on + strand, within Psyr_4228 at 5035.802 kb on + strand, within Psyr_4228 at 5035.803 kb on - strand, within Psyr_4228 at 5035.803 kb on - strand, within Psyr_4228 at 5035.803 kb on - strand, within Psyr_4228 at 5035.803 kb on - strand, within Psyr_4228 at 5035.803 kb on - strand, within Psyr_4228 at 5035.803 kb on - strand, within Psyr_4228 at 5035.803 kb on - strand, within Psyr_4228 at 5035.803 kb on - strand, within Psyr_4228 at 5035.803 kb on - strand, within Psyr_4228 at 5035.803 kb on - strand, within Psyr_4228 at 5035.803 kb on - strand, within Psyr_4228 at 5035.895 kb on + strand, within Psyr_4228 at 5035.896 kb on - strand, within Psyr_4228 at 5036.092 kb on + strand, within Psyr_4228 at 5036.092 kb on + strand, within Psyr_4228 at 5036.093 kb on - strand, within Psyr_4228 at 5036.093 kb on - strand, within Psyr_4228 at 5036.093 kb on - strand, within Psyr_4228 at 5036.093 kb on - strand, within Psyr_4228 at 5036.313 kb on + strand, within Psyr_4228
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 5,033,455 + Psyr_4226 0.41 -0.7 5,033,455 + Psyr_4226 0.41 +0.4 5,033,456 - Psyr_4226 0.41 +2.7 5,033,456 - Psyr_4226 0.41 +1.1 5,033,482 + Psyr_4226 0.43 +2.1 5,033,482 + Psyr_4226 0.43 -1.4 5,033,482 + Psyr_4226 0.43 -1.9 5,033,483 - Psyr_4226 0.43 -0.4 5,033,483 - Psyr_4226 0.43 -0.3 5,033,483 - Psyr_4226 0.43 +0.1 5,033,483 - Psyr_4226 0.43 +0.6 5,033,483 - Psyr_4226 0.43 +4.5 5,033,504 - Psyr_4226 0.45 +2.1 5,033,515 + Psyr_4226 0.45 -1.9 5,033,515 + Psyr_4226 0.45 -1.3 5,033,515 + Psyr_4226 0.45 +3.3 5,033,515 + Psyr_4226 0.45 +3.1 5,033,516 - Psyr_4226 0.45 -0.5 5,033,516 - Psyr_4226 0.45 +1.7 5,033,516 - Psyr_4226 0.45 +2.7 5,033,516 - Psyr_4226 0.45 -0.2 5,033,516 - Psyr_4226 0.45 +2.9 5,033,519 + Psyr_4226 0.46 -0.4 5,033,519 + Psyr_4226 0.46 -2.7 5,033,520 - Psyr_4226 0.46 +0.1 5,033,531 + Psyr_4226 0.46 -0.8 5,033,531 + Psyr_4226 0.46 -2.7 5,033,531 + Psyr_4226 0.46 +3.3 5,033,531 + Psyr_4226 0.46 -1.1 5,033,531 + Psyr_4226 0.46 -1.7 5,033,532 - Psyr_4226 0.47 -2.7 5,033,532 - Psyr_4226 0.47 -1.0 5,033,532 - Psyr_4226 0.47 -1.5 5,033,557 + Psyr_4226 0.48 -0.5 5,033,557 + Psyr_4226 0.48 -3.5 5,033,557 + Psyr_4226 0.48 -0.8 5,033,557 + Psyr_4226 0.48 -2.0 5,033,558 - Psyr_4226 0.48 -2.5 5,033,558 - Psyr_4226 0.48 -2.3 5,033,558 - Psyr_4226 0.48 +1.1 5,033,558 - Psyr_4226 0.48 -1.8 5,033,558 - Psyr_4226 0.48 +4.6 5,033,558 - Psyr_4226 0.48 -1.5 5,033,558 - Psyr_4226 0.48 -1.5 5,033,558 - Psyr_4226 0.48 +0.1 5,033,558 - Psyr_4226 0.48 +2.1 5,033,558 - Psyr_4226 0.48 -4.9 5,033,601 - Psyr_4226 0.52 +1.8 5,033,692 + Psyr_4226 0.58 +0.8 5,033,693 - Psyr_4226 0.58 -3.1 5,033,693 - Psyr_4226 0.58 -0.7 5,033,693 - Psyr_4226 0.58 -3.2 5,033,767 + Psyr_4226 0.63 -2.6 5,033,767 + Psyr_4226 0.63 +3.3 5,033,767 + Psyr_4226 0.63 +0.5 5,033,768 - Psyr_4226 0.64 -1.5 5,033,773 + Psyr_4226 0.64 +0.1 5,033,773 + Psyr_4226 0.64 +0.8 5,033,774 - Psyr_4226 0.64 +2.7 5,033,774 - Psyr_4226 0.64 -1.1 5,033,774 - Psyr_4226 0.64 +0.0 5,033,818 + Psyr_4226 0.67 -0.5 5,033,819 - Psyr_4226 0.67 -4.0 5,033,819 - Psyr_4226 0.67 +2.1 5,033,986 + Psyr_4226 0.79 -1.1 5,033,986 + Psyr_4226 0.79 -5.7 5,033,986 + Psyr_4226 0.79 +3.6 5,033,986 + Psyr_4226 0.79 -1.8 5,033,986 + Psyr_4226 0.79 +0.3 5,033,986 + Psyr_4226 0.79 +1.0 5,033,986 + Psyr_4226 0.79 -1.4 5,033,987 - Psyr_4226 0.79 -3.6 5,034,034 + Psyr_4226 0.83 -1.6 5,034,035 - Psyr_4226 0.83 +4.1 5,034,094 + Psyr_4226 0.87 -1.2 5,034,094 + Psyr_4226 0.87 -0.3 5,034,094 + Psyr_4226 0.87 -3.9 5,034,094 + Psyr_4226 0.87 +0.1 5,034,095 - Psyr_4226 0.87 -1.8 5,034,095 - Psyr_4226 0.87 +2.1 5,034,119 + Psyr_4226 0.89 -0.2 5,034,119 + Psyr_4226 0.89 -2.0 5,034,119 + Psyr_4226 0.89 +2.1 5,034,119 + Psyr_4226 0.89 -1.6 5,034,120 - Psyr_4226 0.89 -1.3 5,034,120 - Psyr_4226 0.89 -0.1 5,034,121 + Psyr_4226 0.89 +2.7 5,034,121 + Psyr_4226 0.89 +1.1 5,034,121 + Psyr_4226 0.89 +2.4 5,034,121 + Psyr_4226 0.89 -0.6 5,034,121 + Psyr_4226 0.89 +0.5 5,034,121 + +2.1 5,034,122 - Psyr_4226 0.89 +2.7 5,034,122 - Psyr_4226 0.89 +1.4 5,034,199 + -1.5 5,034,200 - -1.9 5,034,200 - -3.5 5,034,241 + -2.3 5,034,275 + +2.4 5,034,276 - -4.0 5,034,325 + -3.3 5,034,438 + -5.1 5,034,604 - Psyr_4227 0.18 +2.0 5,034,627 + Psyr_4227 0.21 +2.9 5,034,627 + Psyr_4227 0.21 -0.8 5,034,627 + Psyr_4227 0.21 +1.7 5,034,628 - Psyr_4227 0.21 +1.7 5,034,628 - Psyr_4227 0.21 +2.7 5,034,628 - Psyr_4227 0.21 +1.5 5,034,628 - Psyr_4227 0.21 +4.9 5,034,628 - Psyr_4227 0.21 +2.9 5,034,628 - Psyr_4227 0.21 -0.2 5,034,628 - Psyr_4227 0.21 +4.8 5,034,628 - Psyr_4227 0.21 +0.1 5,034,669 + Psyr_4227 0.25 -4.6 5,034,669 + Psyr_4227 0.25 -1.9 5,034,670 - Psyr_4227 0.26 -0.8 5,034,670 - Psyr_4227 0.26 -1.1 5,034,718 - Psyr_4227 0.31 +4.6 5,034,742 - Psyr_4227 0.33 -2.2 5,034,753 + Psyr_4227 0.35 -1.9 5,034,754 - Psyr_4227 0.35 -0.3 5,034,754 - Psyr_4227 0.35 -1.3 5,034,832 + Psyr_4227 0.43 -0.5 5,034,927 + Psyr_4227 0.54 +0.1 5,034,927 + Psyr_4227 0.54 -2.7 5,034,928 - Psyr_4227 0.54 +2.9 5,034,928 - Psyr_4227 0.54 -3.1 5,034,928 - Psyr_4227 0.54 -0.1 5,034,928 - Psyr_4227 0.54 -4.2 5,034,928 - Psyr_4227 0.54 -0.7 5,035,008 + Psyr_4227 0.63 +1.0 5,035,009 - Psyr_4227 0.63 +0.3 5,035,009 - Psyr_4227 0.63 +1.6 5,035,091 + Psyr_4227 0.72 +0.1 5,035,091 + Psyr_4227 0.72 +2.7 5,035,092 - Psyr_4227 0.72 -0.0 5,035,349 + +1.2 5,035,349 + -0.3 5,035,371 + -2.0 5,035,371 + +4.4 5,035,371 + -1.2 5,035,371 + +1.1 5,035,371 + +2.9 5,035,371 + +0.0 5,035,372 - +1.7 5,035,372 - +0.1 5,035,372 - -2.7 5,035,372 - +0.1 5,035,372 - +0.1 5,035,372 - +1.7 5,035,372 - -2.1 5,035,372 - -1.4 5,035,372 - -2.0 5,035,431 - +0.2 5,035,507 + +1.1 5,035,507 + +4.7 5,035,507 + -0.3 5,035,507 + +0.6 5,035,507 + +4.7 5,035,507 + -0.4 5,035,507 + +0.5 5,035,507 + -0.3 5,035,507 + +1.7 5,035,508 - +2.7 5,035,508 - -4.4 5,035,508 - -1.8 5,035,508 - -2.1 5,035,508 - -1.5 5,035,508 - -0.9 5,035,508 - -2.9 5,035,508 - +0.1 5,035,508 - -3.8 5,035,508 - +2.4 5,035,508 - +0.1 5,035,565 + -0.7 5,035,565 + -1.5 5,035,565 + +4.7 5,035,565 + -1.7 5,035,565 + -0.4 5,035,566 - -0.6 5,035,566 - -4.2 5,035,566 - +1.1 5,035,585 + -2.5 5,035,585 + -0.4 5,035,585 + +1.7 5,035,585 + +1.1 5,035,585 + -1.4 5,035,586 - -2.6 5,035,800 + Psyr_4228 0.20 +2.1 5,035,800 + Psyr_4228 0.20 -1.9 5,035,800 + Psyr_4228 0.20 -1.2 5,035,800 + Psyr_4228 0.20 +1.1 5,035,800 + Psyr_4228 0.20 +0.7 5,035,800 + Psyr_4228 0.20 -1.0 5,035,800 + Psyr_4228 0.20 -4.4 5,035,800 + Psyr_4228 0.20 -3.1 5,035,801 - Psyr_4228 0.20 -1.6 5,035,801 - Psyr_4228 0.20 +2.1 5,035,801 - Psyr_4228 0.20 +3.9 5,035,801 - Psyr_4228 0.20 -0.7 5,035,801 - Psyr_4228 0.20 +1.1 5,035,801 - Psyr_4228 0.20 -0.9 5,035,801 - Psyr_4228 0.20 +3.3 5,035,802 + Psyr_4228 0.21 -0.7 5,035,802 + Psyr_4228 0.21 -3.5 5,035,802 + Psyr_4228 0.21 +2.7 5,035,802 + Psyr_4228 0.21 -2.4 5,035,802 + Psyr_4228 0.21 +2.9 5,035,802 + Psyr_4228 0.21 +1.1 5,035,802 + Psyr_4228 0.21 -1.3 5,035,803 - Psyr_4228 0.21 +2.9 5,035,803 - Psyr_4228 0.21 +0.6 5,035,803 - Psyr_4228 0.21 -1.2 5,035,803 - Psyr_4228 0.21 +3.3 5,035,803 - Psyr_4228 0.21 -1.6 5,035,803 - Psyr_4228 0.21 +3.7 5,035,803 - Psyr_4228 0.21 +3.9 5,035,803 - Psyr_4228 0.21 +0.4 5,035,803 - Psyr_4228 0.21 -0.7 5,035,803 - Psyr_4228 0.21 -4.7 5,035,803 - Psyr_4228 0.21 -1.3 5,035,895 + Psyr_4228 0.33 -2.0 5,035,896 - Psyr_4228 0.33 -2.6 5,036,092 + Psyr_4228 0.59 +2.4 5,036,092 + Psyr_4228 0.59 -3.5 5,036,093 - Psyr_4228 0.59 -4.8 5,036,093 - Psyr_4228 0.59 -2.8 5,036,093 - Psyr_4228 0.59 +1.1 5,036,093 - Psyr_4228 0.59 -3.9 5,036,313 + Psyr_4228 0.89 -3.9
Or see this region's nucleotide sequence