Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4210 and Psyr_4211 are separated by 166 nucleotides Psyr_4211 and Psyr_4212 are separated by 50 nucleotides
Psyr_4210: Psyr_4210 - sodium/proton antiporter, NhaA family, at 5,014,645 to 5,015,823
_4210
Psyr_4211: Psyr_4211 - extracellular solute-binding protein, family 5, at 5,015,990 to 5,017,504
_4211
Psyr_4212: Psyr_4212 - Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal, at 5,017,555 to 5,018,535
_4212
Position (kb) 5015
5016
5017
5018 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 5015.895 kb on - strand at 5015.895 kb on - strand at 5015.914 kb on - strand at 5015.931 kb on + strand at 5015.932 kb on - strand at 5016.016 kb on + strand at 5016.017 kb on - strand at 5016.075 kb on + strand at 5016.075 kb on + strand at 5016.076 kb on - strand at 5016.076 kb on - strand at 5016.084 kb on + strand at 5016.084 kb on + strand at 5016.084 kb on + strand at 5016.084 kb on + strand at 5016.084 kb on + strand at 5016.084 kb on + strand at 5016.084 kb on + strand at 5016.084 kb on + strand at 5016.084 kb on + strand at 5016.085 kb on - strand at 5016.085 kb on - strand at 5016.085 kb on - strand at 5016.085 kb on - strand at 5016.085 kb on - strand at 5016.085 kb on - strand at 5016.085 kb on - strand at 5016.085 kb on - strand at 5016.085 kb on - strand at 5016.087 kb on + strand at 5016.088 kb on - strand at 5016.088 kb on - strand at 5016.138 kb on + strand at 5016.138 kb on + strand at 5016.138 kb on + strand at 5016.138 kb on + strand at 5016.138 kb on + strand at 5016.138 kb on + strand at 5016.138 kb on + strand at 5016.138 kb on + strand at 5016.138 kb on + strand at 5016.138 kb on + strand at 5016.138 kb on + strand at 5016.138 kb on + strand at 5016.139 kb on - strand at 5016.139 kb on - strand at 5016.139 kb on - strand at 5016.139 kb on - strand at 5016.139 kb on - strand at 5016.139 kb on - strand at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.225 kb on + strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.226 kb on - strand, within Psyr_4211 at 5016.229 kb on + strand, within Psyr_4211 at 5016.229 kb on + strand, within Psyr_4211 at 5016.229 kb on + strand, within Psyr_4211 at 5016.230 kb on - strand, within Psyr_4211 at 5016.230 kb on - strand, within Psyr_4211 at 5016.230 kb on - strand, within Psyr_4211 at 5016.230 kb on - strand, within Psyr_4211 at 5016.297 kb on + strand, within Psyr_4211 at 5016.297 kb on + strand, within Psyr_4211 at 5016.297 kb on + strand, within Psyr_4211 at 5016.297 kb on + strand, within Psyr_4211 at 5016.297 kb on + strand, within Psyr_4211 at 5016.297 kb on + strand, within Psyr_4211 at 5016.297 kb on + strand, within Psyr_4211 at 5016.297 kb on + strand, within Psyr_4211 at 5016.297 kb on + strand, within Psyr_4211 at 5016.297 kb on + strand, within Psyr_4211 at 5016.298 kb on - strand, within Psyr_4211 at 5016.298 kb on - strand, within Psyr_4211 at 5016.298 kb on - strand, within Psyr_4211 at 5016.298 kb on - strand, within Psyr_4211 at 5016.298 kb on - strand, within Psyr_4211 at 5016.298 kb on - strand, within Psyr_4211 at 5016.298 kb on - strand, within Psyr_4211 at 5016.298 kb on - strand, within Psyr_4211 at 5016.298 kb on - strand, within Psyr_4211 at 5016.298 kb on - strand, within Psyr_4211 at 5016.298 kb on - strand, within Psyr_4211 at 5016.298 kb on - strand, within Psyr_4211 at 5016.315 kb on + strand, within Psyr_4211 at 5016.315 kb on + strand, within Psyr_4211 at 5016.453 kb on + strand, within Psyr_4211 at 5016.453 kb on + strand, within Psyr_4211 at 5016.453 kb on + strand, within Psyr_4211 at 5016.453 kb on + strand, within Psyr_4211 at 5016.453 kb on + strand, within Psyr_4211 at 5016.453 kb on + strand, within Psyr_4211 at 5016.454 kb on - strand, within Psyr_4211 at 5016.454 kb on - strand, within Psyr_4211 at 5016.454 kb on - strand, within Psyr_4211 at 5016.454 kb on - strand, within Psyr_4211 at 5016.454 kb on - strand, within Psyr_4211 at 5016.454 kb on - strand, within Psyr_4211 at 5016.516 kb on + strand, within Psyr_4211 at 5016.517 kb on - strand, within Psyr_4211 at 5016.541 kb on - strand, within Psyr_4211 at 5016.541 kb on - strand, within Psyr_4211 at 5016.972 kb on + strand, within Psyr_4211 at 5016.972 kb on + strand, within Psyr_4211 at 5016.973 kb on - strand, within Psyr_4211 at 5016.973 kb on - strand, within Psyr_4211 at 5016.973 kb on - strand, within Psyr_4211 at 5017.085 kb on - strand, within Psyr_4211 at 5017.122 kb on + strand, within Psyr_4211 at 5017.239 kb on + strand, within Psyr_4211 at 5017.239 kb on + strand, within Psyr_4211 at 5017.240 kb on - strand, within Psyr_4211 at 5017.240 kb on - strand, within Psyr_4211 at 5017.310 kb on + strand, within Psyr_4211 at 5017.310 kb on + strand, within Psyr_4211 at 5017.310 kb on + strand, within Psyr_4211 at 5017.311 kb on - strand, within Psyr_4211 at 5017.311 kb on - strand, within Psyr_4211 at 5017.329 kb on + strand, within Psyr_4211 at 5017.329 kb on + strand, within Psyr_4211 at 5017.330 kb on - strand, within Psyr_4211 at 5017.330 kb on - strand, within Psyr_4211 at 5017.330 kb on - strand, within Psyr_4211 at 5017.504 kb on + strand at 5017.504 kb on + strand at 5017.505 kb on - strand at 5017.505 kb on - strand at 5017.778 kb on + strand, within Psyr_4212 at 5017.778 kb on + strand, within Psyr_4212 at 5017.779 kb on - strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.842 kb on - strand, within Psyr_4212 at 5017.842 kb on - strand, within Psyr_4212 at 5017.842 kb on - strand, within Psyr_4212 at 5017.842 kb on - strand, within Psyr_4212 at 5017.842 kb on - strand, within Psyr_4212 at 5017.842 kb on - strand, within Psyr_4212 at 5017.842 kb on - strand, within Psyr_4212 at 5018.325 kb on + strand, within Psyr_4212 at 5018.326 kb on - strand, within Psyr_4212 at 5018.326 kb on - strand, within Psyr_4212 at 5018.326 kb on - strand, within Psyr_4212
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 5,015,895 - +0.2 5,015,895 - +2.7 5,015,914 - -1.2 5,015,931 + +0.7 5,015,932 - +3.1 5,016,016 + -1.4 5,016,017 - +0.4 5,016,075 + -2.8 5,016,075 + -0.1 5,016,076 - +3.1 5,016,076 - -1.4 5,016,084 + -1.3 5,016,084 + -3.2 5,016,084 + +1.1 5,016,084 + +0.1 5,016,084 + -0.5 5,016,084 + +0.0 5,016,084 + +4.6 5,016,084 + +3.6 5,016,084 + +0.1 5,016,085 - -1.5 5,016,085 - +2.9 5,016,085 - +2.1 5,016,085 - -4.0 5,016,085 - +3.7 5,016,085 - +1.6 5,016,085 - +2.7 5,016,085 - -0.5 5,016,085 - -4.4 5,016,087 + +0.1 5,016,088 - +2.7 5,016,088 - +1.4 5,016,138 + -0.1 5,016,138 + +0.1 5,016,138 + -0.7 5,016,138 + +1.2 5,016,138 + -1.4 5,016,138 + -1.8 5,016,138 + +0.1 5,016,138 + +3.1 5,016,138 + -0.1 5,016,138 + +0.1 5,016,138 + -0.5 5,016,138 + +0.5 5,016,139 - +1.7 5,016,139 - -1.8 5,016,139 - +4.6 5,016,139 - +0.9 5,016,139 - +0.3 5,016,139 - +0.3 5,016,225 + Psyr_4211 0.16 -1.7 5,016,225 + Psyr_4211 0.16 +0.5 5,016,225 + Psyr_4211 0.16 +3.1 5,016,225 + Psyr_4211 0.16 +0.7 5,016,225 + Psyr_4211 0.16 -0.8 5,016,225 + Psyr_4211 0.16 +0.4 5,016,225 + Psyr_4211 0.16 -1.1 5,016,225 + Psyr_4211 0.16 -0.7 5,016,225 + Psyr_4211 0.16 +1.7 5,016,225 + Psyr_4211 0.16 -1.7 5,016,225 + Psyr_4211 0.16 -3.3 5,016,225 + Psyr_4211 0.16 -1.8 5,016,225 + Psyr_4211 0.16 +1.0 5,016,225 + Psyr_4211 0.16 +1.7 5,016,225 + Psyr_4211 0.16 -0.2 5,016,225 + Psyr_4211 0.16 -2.3 5,016,226 - Psyr_4211 0.16 -3.5 5,016,226 - Psyr_4211 0.16 +0.3 5,016,226 - Psyr_4211 0.16 -0.5 5,016,226 - Psyr_4211 0.16 +3.7 5,016,226 - Psyr_4211 0.16 -1.3 5,016,226 - Psyr_4211 0.16 +1.6 5,016,226 - Psyr_4211 0.16 +1.7 5,016,226 - Psyr_4211 0.16 +1.5 5,016,226 - Psyr_4211 0.16 +0.1 5,016,226 - Psyr_4211 0.16 +0.1 5,016,226 - Psyr_4211 0.16 +4.0 5,016,226 - Psyr_4211 0.16 +2.9 5,016,226 - Psyr_4211 0.16 +3.7 5,016,226 - Psyr_4211 0.16 +3.6 5,016,226 - Psyr_4211 0.16 +0.1 5,016,226 - Psyr_4211 0.16 -0.0 5,016,229 + Psyr_4211 0.16 -2.5 5,016,229 + Psyr_4211 0.16 +2.1 5,016,229 + Psyr_4211 0.16 +3.7 5,016,230 - Psyr_4211 0.16 +1.3 5,016,230 - Psyr_4211 0.16 -1.0 5,016,230 - Psyr_4211 0.16 -0.3 5,016,230 - Psyr_4211 0.16 +2.7 5,016,297 + Psyr_4211 0.20 +4.2 5,016,297 + Psyr_4211 0.20 +0.1 5,016,297 + Psyr_4211 0.20 -1.0 5,016,297 + Psyr_4211 0.20 +1.1 5,016,297 + Psyr_4211 0.20 -1.0 5,016,297 + Psyr_4211 0.20 +3.6 5,016,297 + Psyr_4211 0.20 -2.8 5,016,297 + Psyr_4211 0.20 +3.8 5,016,297 + Psyr_4211 0.20 -2.3 5,016,297 + Psyr_4211 0.20 -3.2 5,016,298 - Psyr_4211 0.20 -0.2 5,016,298 - Psyr_4211 0.20 +3.1 5,016,298 - Psyr_4211 0.20 -1.7 5,016,298 - Psyr_4211 0.20 +2.1 5,016,298 - Psyr_4211 0.20 -0.2 5,016,298 - Psyr_4211 0.20 +1.1 5,016,298 - Psyr_4211 0.20 -3.9 5,016,298 - Psyr_4211 0.20 +2.4 5,016,298 - Psyr_4211 0.20 -0.1 5,016,298 - Psyr_4211 0.20 -5.1 5,016,298 - Psyr_4211 0.20 +1.8 5,016,298 - Psyr_4211 0.20 +0.1 5,016,315 + Psyr_4211 0.21 +3.1 5,016,315 + Psyr_4211 0.21 -1.9 5,016,453 + Psyr_4211 0.31 -0.5 5,016,453 + Psyr_4211 0.31 -0.8 5,016,453 + Psyr_4211 0.31 -0.7 5,016,453 + Psyr_4211 0.31 -1.4 5,016,453 + Psyr_4211 0.31 +3.9 5,016,453 + Psyr_4211 0.31 +1.1 5,016,454 - Psyr_4211 0.31 -1.3 5,016,454 - Psyr_4211 0.31 +0.2 5,016,454 - Psyr_4211 0.31 +1.7 5,016,454 - Psyr_4211 0.31 +2.9 5,016,454 - Psyr_4211 0.31 -0.3 5,016,454 - Psyr_4211 0.31 +1.2 5,016,516 + Psyr_4211 0.35 -0.6 5,016,517 - Psyr_4211 0.35 -0.9 5,016,541 - Psyr_4211 0.36 +0.4 5,016,541 - Psyr_4211 0.36 +0.2 5,016,972 + Psyr_4211 0.65 -1.3 5,016,972 + Psyr_4211 0.65 +4.0 5,016,973 - Psyr_4211 0.65 +3.8 5,016,973 - Psyr_4211 0.65 +1.7 5,016,973 - Psyr_4211 0.65 -2.0 5,017,085 - Psyr_4211 0.72 +3.3 5,017,122 + Psyr_4211 0.75 -1.8 5,017,239 + Psyr_4211 0.82 -0.9 5,017,239 + Psyr_4211 0.82 +3.1 5,017,240 - Psyr_4211 0.83 -2.6 5,017,240 - Psyr_4211 0.83 +0.1 5,017,310 + Psyr_4211 0.87 -4.2 5,017,310 + Psyr_4211 0.87 +2.7 5,017,310 + Psyr_4211 0.87 -1.5 5,017,311 - Psyr_4211 0.87 +3.3 5,017,311 - Psyr_4211 0.87 +2.7 5,017,329 + Psyr_4211 0.88 -1.3 5,017,329 + Psyr_4211 0.88 -2.9 5,017,330 - Psyr_4211 0.88 -2.0 5,017,330 - Psyr_4211 0.88 +2.4 5,017,330 - Psyr_4211 0.88 -1.5 5,017,504 + -0.4 5,017,504 + +0.1 5,017,505 - -1.7 5,017,505 - +1.3 5,017,778 + Psyr_4212 0.23 -1.5 5,017,778 + Psyr_4212 0.23 -1.6 5,017,779 - Psyr_4212 0.23 -1.5 5,017,841 + Psyr_4212 0.29 -0.6 5,017,841 + Psyr_4212 0.29 +0.1 5,017,841 + Psyr_4212 0.29 -1.0 5,017,841 + Psyr_4212 0.29 +0.1 5,017,841 + Psyr_4212 0.29 +1.0 5,017,841 + Psyr_4212 0.29 -1.5 5,017,841 + Psyr_4212 0.29 +1.7 5,017,841 + Psyr_4212 0.29 -3.1 5,017,841 + Psyr_4212 0.29 -3.4 5,017,841 + Psyr_4212 0.29 -3.6 5,017,842 - Psyr_4212 0.29 +2.7 5,017,842 - Psyr_4212 0.29 +1.7 5,017,842 - Psyr_4212 0.29 +3.9 5,017,842 - Psyr_4212 0.29 -4.9 5,017,842 - Psyr_4212 0.29 -0.1 5,017,842 - Psyr_4212 0.29 +0.6 5,017,842 - Psyr_4212 0.29 +0.9 5,018,325 + Psyr_4212 0.78 -0.8 5,018,326 - Psyr_4212 0.79 -1.9 5,018,326 - Psyr_4212 0.79 +0.6 5,018,326 - Psyr_4212 0.79 -2.1
Or see this region's nucleotide sequence