Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4084

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
4,868,770	+		Psyr_4082	0.57	-2.3
4,868,770	+		Psyr_4082	0.57	+1.7
4,868,770	+		Psyr_4082	0.57	-0.9
4,868,770	+		Psyr_4082	0.57	+0.1
4,868,770	+		Psyr_4082	0.57	+2.1
4,869,194	+		Psyr_4082	0.84	+4.7
4,869,443	-				-3.1
4,869,712	+				-2.2
4,869,713	-				-0.0
4,869,713	-				+0.1
4,869,770	+				-4.4
4,869,770	+				+0.3
4,869,770	+				-4.5
4,869,770	+				+2.1
4,869,770	+				-2.7
4,869,771	-				+1.0
4,869,771	-				+1.7
4,869,815	+				-3.4
4,869,816	-				+0.1
4,869,826	+				-5.1
4,869,826	+				+1.1
4,869,826	+				-3.2
4,869,826	+				-2.8
4,869,826	+				+0.6
4,869,826	+				+2.7
4,869,826	+				-5.2
4,869,827	-				+2.9
4,869,827	-				+2.9
4,869,827	-				+0.1
4,869,827	-				-0.5
4,869,827	-				-2.2
4,869,876	-				-0.6
4,869,876	-				+0.1
4,869,878	+				+2.1
4,869,878	+				-1.9
4,869,879	-				-1.9
4,869,883	+				-3.7
4,869,884	-				+2.9
4,869,884	-				-0.9
4,869,908	+		Psyr_4084	0.10	-2.4
4,869,909	-		Psyr_4084	0.10	+2.4
4,869,941	-		Psyr_4084	0.12	-2.1
4,869,962	+		Psyr_4084	0.14	+3.1
4,869,962	+		Psyr_4084	0.14	-1.2
4,869,963	-		Psyr_4084	0.14	+1.1
4,870,026	+		Psyr_4084	0.18	+1.1
4,870,041	-		Psyr_4084	0.19	-3.6
4,870,042	+		Psyr_4084	0.19	+3.1
4,870,063	-		Psyr_4084	0.20	-1.9
4,870,095	+		Psyr_4084	0.22	-1.5
4,870,101	+		Psyr_4084	0.23	+1.1
4,870,107	+		Psyr_4084	0.23	+3.4
4,870,109	+		Psyr_4084	0.23	-4.0
4,870,110	-		Psyr_4084	0.23	-0.7
4,870,110	-		Psyr_4084	0.23	-4.0
4,870,237	-		Psyr_4084	0.31	-0.8
4,870,306	-		Psyr_4084	0.36	-1.6
4,870,364	+		Psyr_4084	0.40	-1.4
4,870,364	+		Psyr_4084	0.40	-1.4
4,870,364	+		Psyr_4084	0.40	-1.2
4,870,385	+		Psyr_4084	0.41	-0.4
4,870,496	+		Psyr_4084	0.48	-2.3
4,870,496	+		Psyr_4084	0.48	+0.1
4,870,507	-		Psyr_4084	0.49	+2.4
4,870,516	+		Psyr_4084	0.50	-2.0
4,870,554	+		Psyr_4084	0.52	+0.1
4,870,555	-		Psyr_4084	0.52	+1.5
4,870,555	-		Psyr_4084	0.52	+2.4
4,870,567	-		Psyr_4084	0.53	+0.1
4,870,607	+		Psyr_4084	0.55	-3.5
4,870,607	+		Psyr_4084	0.55	-1.7
4,870,607	+		Psyr_4084	0.55	+1.1
4,870,607	+		Psyr_4084	0.55	-1.3
4,870,608	-		Psyr_4084	0.55	-2.5
4,870,608	-		Psyr_4084	0.55	+2.7
4,870,608	-		Psyr_4084	0.55	+2.9
4,871,068	+		Psyr_4084	0.85	+3.7
4,871,104	-		Psyr_4084	0.88	-1.3
4,871,204	+				+4.2
4,871,204	+				+1.1
4,871,301	-				-2.6
4,871,332	+				-1.2
4,871,332	+				+1.1
4,871,332	+				-1.6
4,871,332	+				-1.8
4,871,333	-				+3.4
4,871,333	-				-1.1
4,871,333	-				+2.7
4,871,333	-				+3.1
4,871,333	-				+0.3
4,871,333	-				-0.7
4,871,336	+				-2.4
4,871,336	+				+3.7
4,871,336	+				+1.1
4,871,337	-				+0.1
4,871,337	-				+0.1
4,871,337	-				-0.8
4,871,337	-				-3.3
4,871,337	-				+0.1
4,871,337	-				-3.3
4,871,337	-				+2.4
4,871,337	-				+2.4
4,871,337	-				-0.3
4,871,337	-				+2.4
4,871,337	-				-1.2
4,871,337	-				+1.7
4,871,337	-				-0.2
4,871,337	-				+0.1
4,871,337	-				-4.3
4,871,337	-				+3.3
4,871,337	-				+0.1
4,871,337	-				-1.4
4,871,337	-				+4.1
4,871,337	-				-1.8
4,871,350	+				-0.3
4,871,361	+				-1.8
4,871,405	-		Psyr_4085	0.14	-0.7
4,871,405	-		Psyr_4085	0.14	+0.8
4,871,518	+		Psyr_4085	0.36	+0.5
4,871,574	+		Psyr_4085	0.47	+1.1
4,871,598	+		Psyr_4085	0.51	-2.5
4,871,598	+		Psyr_4085	0.51	+0.6
4,871,599	-		Psyr_4085	0.52	-0.1
4,871,632	+		Psyr_4085	0.58	+0.3
4,871,640	+		Psyr_4085	0.59	+3.1
4,871,641	-		Psyr_4085	0.60	-1.3
4,871,641	-		Psyr_4085	0.60	-5.4
4,871,736	+		Psyr_4085	0.78	+2.1
4,871,831	+				-1.9
4,871,831	+				+3.1
4,871,831	+				+3.3
4,871,838	-				-2.2
4,871,838	-				-0.5
4,871,842	+				+3.8
4,871,842	+				-1.2
4,871,843	-				+0.1
4,871,846	+				-0.6
4,871,846	+				+4.3
4,871,847	-				-2.6
4,871,847	-				+2.7
4,871,847	-				-4.6
4,871,847	-				+0.1
4,871,851	+				+3.4
4,871,851	+				+3.7
4,871,886	-				+0.1
4,871,898	+				-0.7
4,871,946	+				+0.1
4,871,947	-				+2.1
4,871,966	-				-1.6
4,871,966	-				+0.1
4,871,966	-				-4.7
4,871,966	-				-2.8
4,871,969	+				-0.9
4,871,969	+				-0.0
4,871,969	+				+4.4
4,872,009	+				-0.8
4,872,010	-				+1.7
4,872,024	+				-0.8
4,872,025	-				+3.8
4,872,166	+		Psyr_4086	0.17	+4.2
4,872,166	+		Psyr_4086	0.17	-1.8
4,872,166	+		Psyr_4086	0.17	+0.6
4,872,166	+		Psyr_4086	0.17	-1.9
4,872,166	+		Psyr_4086	0.17	+0.3
4,872,166	+		Psyr_4086	0.17	+1.8
4,872,167	-		Psyr_4086	0.17	+1.5
4,872,167	-		Psyr_4086	0.17	+0.7
4,872,167	-		Psyr_4086	0.17	-0.6
4,872,167	-		Psyr_4086	0.17	-4.0
4,872,167	-		Psyr_4086	0.17	-1.1
4,872,167	-		Psyr_4086	0.17	-0.2