Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4066

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
4,849,741	-		Psyr_4065	0.12	+2.4
4,849,774	+		Psyr_4065	0.15	-0.1
4,849,862	+		Psyr_4065	0.23	+0.1
4,849,862	+		Psyr_4065	0.23	-3.1
4,849,863	-		Psyr_4065	0.23	+1.7
4,849,872	+		Psyr_4065	0.24	-0.8
4,849,872	+		Psyr_4065	0.24	-3.5
4,849,872	+		Psyr_4065	0.24	-1.1
4,849,873	-		Psyr_4065	0.24	-0.5
4,849,938	+		Psyr_4065	0.30	-2.1
4,849,939	-		Psyr_4065	0.30	-1.3
4,849,939	-		Psyr_4065	0.30	-2.1
4,849,978	-		Psyr_4065	0.34	+2.1
4,850,017	+		Psyr_4065	0.37	+0.7
4,850,269	+		Psyr_4065	0.60	+2.9
4,850,427	+		Psyr_4065	0.74	+4.9
4,850,428	-		Psyr_4065	0.74	+0.4
4,850,428	-		Psyr_4065	0.74	-1.9
4,850,428	-		Psyr_4065	0.74	+1.7
4,850,428	-		Psyr_4065	0.74	-0.3
4,850,446	+		Psyr_4065	0.76	-1.0
4,850,447	-		Psyr_4065	0.76	-2.0
4,850,619	+				-4.0
4,850,619	+				+2.9
4,850,619	+				-0.1
4,850,619	+				-2.1
4,850,619	+				+1.1
4,850,619	+				+3.7
4,850,619	+				+0.1
4,850,620	-				-1.2
4,850,620	-				-0.4
4,850,620	-				+1.7
4,850,620	-				-2.5
4,850,620	-				-2.3
4,850,620	-				+2.1
4,850,709	+				-0.4
4,850,713	+				+2.7
4,850,713	+				-0.8
4,850,713	+				-0.7
4,850,714	-				+1.7
4,850,714	-				-0.3
4,850,714	-				+4.3
4,850,714	-				-0.5
4,850,766	+		Psyr_4066	0.15	+3.8
4,850,766	+		Psyr_4066	0.15	+0.6
4,850,766	+		Psyr_4066	0.15	-1.1
4,850,766	+		Psyr_4066	0.15	+2.7
4,850,766	+				+0.1
4,850,766	+		Psyr_4066	0.15	+2.7
4,850,766	+		Psyr_4066	0.15	-2.4
4,850,766	+		Psyr_4066	0.15	+6.4
4,850,767	-		Psyr_4066	0.15	+0.6
4,850,767	-		Psyr_4066	0.15	+0.8
4,850,767	-		Psyr_4066	0.15	+2.7
4,850,929	+		Psyr_4066	0.86	-2.1
4,850,952	-				+2.4
4,850,977	-				-1.9
4,850,977	-				-3.8
4,851,005	+				-0.5
4,851,005	+				+0.1
4,851,063	+		Psyr_4067	0.15	+2.9
4,851,185	+		Psyr_4067	0.32	+2.1
4,851,185	+		Psyr_4067	0.32	-0.9
4,851,185	+		Psyr_4067	0.32	-3.5
4,851,185	+		Psyr_4067	0.32	+1.1
4,851,185	+		Psyr_4067	0.32	+2.1
4,851,185	+		Psyr_4067	0.32	+0.1
4,851,185	+		Psyr_4067	0.32	-1.7
4,851,185	+		Psyr_4067	0.32	-1.2
4,851,185	+		Psyr_4067	0.32	-2.1
4,851,185	+		Psyr_4067	0.32	+0.1
4,851,185	+		Psyr_4067	0.32	-1.8
4,851,186	-		Psyr_4067	0.32	+1.7
4,851,186	-		Psyr_4067	0.32	-2.6
4,851,186	-		Psyr_4067	0.32	+2.1
4,851,186	-		Psyr_4067	0.32	+0.1
4,851,260	+		Psyr_4067	0.42	-4.9
4,851,260	+		Psyr_4067	0.42	+0.1
4,851,260	+		Psyr_4067	0.42	-2.6
4,851,261	-		Psyr_4067	0.42	-0.2
4,851,261	-		Psyr_4067	0.42	-4.3
4,851,261	-		Psyr_4067	0.42	-2.3
4,851,261	-		Psyr_4067	0.42	+1.7
4,851,454	+		Psyr_4067	0.69	-1.3
4,851,455	-		Psyr_4067	0.69	-0.5
4,851,455	-		Psyr_4067	0.69	+2.4
4,851,492	-		Psyr_4067	0.74	+3.6
4,851,492	-		Psyr_4067	0.74	+2.9
4,851,495	+		Psyr_4067	0.75	-0.4
4,851,495	+		Psyr_4067	0.75	-2.0
4,851,495	+		Psyr_4067	0.75	-1.1
4,851,495	+		Psyr_4067	0.75	+1.1
4,851,496	-		Psyr_4067	0.75	-0.8
4,851,496	-		Psyr_4067	0.75	+2.7
4,851,496	-		Psyr_4067	0.75	-1.0
4,851,496	-		Psyr_4067	0.75	+2.1
4,851,496	-		Psyr_4067	0.75	-1.3
4,851,496	-		Psyr_4067	0.75	-1.2
4,851,518	+		Psyr_4067	0.78	+1.1
4,851,518	+		Psyr_4067	0.78	+0.5
4,851,684	+				+5.1
4,851,691	+				-1.3
4,851,691	+				-1.7
4,851,691	+				+0.5
4,851,691	+				+4.6
4,851,691	+				-2.1
4,851,691	+				-2.6
4,851,692	-				+3.1
4,851,692	-				-3.7
4,851,692	-				-4.1
4,851,692	-				-0.6
4,851,696	-				-3.7
4,851,696	-				+4.5
4,851,702	+				-0.1
4,851,702	+				-0.7
4,851,702	+				-3.8
4,851,702	+				+2.7
4,851,702	+				+1.1
4,851,702	+				-3.9
4,851,702	+				+1.4
4,851,702	+				+5.1
4,851,702	+				+2.1
4,851,702	+				-0.8
4,851,702	+				-0.9
4,851,702	+				-1.7
4,851,702	+				+0.4
4,851,703	-				-0.2
4,851,703	-				+3.3
4,851,703	-				-0.6
4,851,703	-				-1.7
4,851,703	-				-3.3
4,851,703	-				-1.2
4,851,703	-				-0.0
4,851,703	-				+4.2
4,851,703	-				+1.1
4,851,703	-				-2.3
4,851,703	-				+1.7
4,851,703	-				-0.5
4,851,703	-				-2.9
4,851,720	+				+2.4
4,851,720	+				+3.2
4,851,720	+				+1.1
4,851,721	-				+3.1
4,851,721	-				-0.6
4,851,721	-				-1.2
4,851,721	-				+0.1
4,851,721	-				-0.8
4,851,816	+		Psyr_4068	0.20	+1.7
4,851,944	+		Psyr_4068	0.38	-0.3
4,851,945	-		Psyr_4068	0.38	-3.5