Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4026 and Psyr_4027 are separated by 28 nucleotides Psyr_4027 and Psyr_4028 are separated by 203 nucleotides Psyr_4028 and Psyr_4029 are separated by 176 nucleotides
Psyr_4026: Psyr_4026 - Protein of unknown function DUF58, at 4,794,338 to 4,795,627
_4026
Psyr_4027: Psyr_4027 - conserved hypothetical protein, at 4,795,656 to 4,796,015
_4027
Psyr_4028: Psyr_4028 - lipoprotein, putative, at 4,796,219 to 4,796,614
_4028
Psyr_4029: Psyr_4029 - pyruvate kinase, at 4,796,791 to 4,798,242
_4029
Position (kb) 4795
4796
4797 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5 at 4794.764 kb on + strand, within Psyr_4026 at 4794.841 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.145 kb on - strand, within Psyr_4026 at 4795.229 kb on + strand, within Psyr_4026 at 4795.229 kb on + strand, within Psyr_4026 at 4795.229 kb on + strand, within Psyr_4026 at 4795.262 kb on + strand, within Psyr_4026 at 4795.262 kb on + strand, within Psyr_4026 at 4795.262 kb on + strand, within Psyr_4026 at 4795.263 kb on - strand, within Psyr_4026 at 4795.263 kb on - strand, within Psyr_4026 at 4795.297 kb on + strand, within Psyr_4026 at 4795.297 kb on + strand, within Psyr_4026 at 4795.297 kb on + strand, within Psyr_4026 at 4795.297 kb on + strand, within Psyr_4026 at 4795.422 kb on + strand, within Psyr_4026 at 4795.422 kb on + strand, within Psyr_4026 at 4795.423 kb on - strand, within Psyr_4026 at 4795.457 kb on + strand, within Psyr_4026 at 4795.457 kb on + strand, within Psyr_4026 at 4795.457 kb on + strand, within Psyr_4026 at 4795.458 kb on - strand, within Psyr_4026 at 4795.458 kb on - strand, within Psyr_4026 at 4795.475 kb on + strand, within Psyr_4026 at 4795.475 kb on + strand, within Psyr_4026 at 4795.475 kb on + strand, within Psyr_4026 at 4795.476 kb on - strand, within Psyr_4026 at 4795.595 kb on + strand at 4795.596 kb on - strand at 4795.596 kb on - strand at 4795.624 kb on - strand at 4795.672 kb on + strand at 4795.672 kb on + strand at 4795.673 kb on - strand at 4795.681 kb on + strand at 4795.693 kb on + strand, within Psyr_4027 at 4795.693 kb on + strand, within Psyr_4027 at 4795.693 kb on + strand, within Psyr_4027 at 4795.693 kb on + strand, within Psyr_4027 at 4795.693 kb on + strand, within Psyr_4027 at 4795.693 kb on + strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.724 kb on - strand, within Psyr_4027 at 4795.724 kb on - strand, within Psyr_4027 at 4795.724 kb on - strand, within Psyr_4027 at 4795.724 kb on - strand, within Psyr_4027 at 4795.762 kb on + strand, within Psyr_4027 at 4795.762 kb on + strand, within Psyr_4027 at 4795.762 kb on + strand, within Psyr_4027 at 4795.763 kb on - strand, within Psyr_4027 at 4795.763 kb on - strand, within Psyr_4027 at 4795.895 kb on + strand, within Psyr_4027 at 4795.949 kb on + strand, within Psyr_4027 at 4795.972 kb on + strand, within Psyr_4027 at 4795.972 kb on + strand, within Psyr_4027 at 4795.972 kb on + strand, within Psyr_4027 at 4796.009 kb on + strand at 4796.009 kb on + strand at 4796.009 kb on + strand at 4796.010 kb on - strand at 4796.010 kb on - strand at 4796.010 kb on - strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.160 kb on + strand at 4796.161 kb on - strand at 4796.161 kb on - strand at 4796.216 kb on + strand at 4796.217 kb on - strand at 4796.220 kb on + strand at 4796.220 kb on + strand at 4796.220 kb on + strand at 4796.221 kb on - strand at 4796.221 kb on - strand at 4796.221 kb on - strand at 4796.221 kb on - strand at 4796.221 kb on - strand at 4796.221 kb on - strand at 4796.249 kb on + strand at 4796.249 kb on + strand at 4796.249 kb on + strand at 4796.250 kb on - strand at 4796.255 kb on + strand at 4796.255 kb on + strand at 4796.255 kb on + strand at 4796.255 kb on + strand at 4796.334 kb on + strand, within Psyr_4028 at 4796.370 kb on + strand, within Psyr_4028 at 4796.370 kb on + strand, within Psyr_4028 at 4796.370 kb on + strand, within Psyr_4028 at 4796.370 kb on + strand, within Psyr_4028 at 4796.371 kb on - strand, within Psyr_4028 at 4796.371 kb on - strand, within Psyr_4028 at 4796.391 kb on + strand, within Psyr_4028 at 4796.391 kb on + strand, within Psyr_4028 at 4796.391 kb on + strand, within Psyr_4028 at 4796.391 kb on + strand, within Psyr_4028 at 4796.392 kb on - strand, within Psyr_4028 at 4796.448 kb on + strand, within Psyr_4028 at 4796.448 kb on + strand, within Psyr_4028 at 4796.448 kb on + strand, within Psyr_4028 at 4796.588 kb on + strand at 4796.591 kb on + strand at 4796.591 kb on + strand at 4796.591 kb on + strand at 4796.591 kb on + strand at 4796.591 kb on + strand at 4796.591 kb on + strand at 4796.591 kb on + strand at 4796.592 kb on - strand at 4796.592 kb on - strand at 4796.592 kb on - strand at 4796.592 kb on - strand at 4796.592 kb on - strand at 4796.592 kb on - strand at 4796.592 kb on - strand at 4796.592 kb on - strand at 4796.603 kb on + strand at 4796.608 kb on + strand at 4796.608 kb on + strand at 4796.672 kb on - strand at 4796.755 kb on + strand at 4796.755 kb on + strand at 4796.756 kb on - strand at 4796.777 kb on + strand at 4796.778 kb on - strand at 4797.015 kb on + strand, within Psyr_4029
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 4,794,764 + Psyr_4026 0.33 -0.5 4,794,841 + Psyr_4026 0.39 +1.1 4,795,112 + Psyr_4026 0.60 -0.6 4,795,112 + Psyr_4026 0.60 +4.7 4,795,112 + Psyr_4026 0.60 +1.1 4,795,112 + Psyr_4026 0.60 +4.2 4,795,112 + Psyr_4026 0.60 +0.3 4,795,112 + Psyr_4026 0.60 +3.7 4,795,112 + Psyr_4026 0.60 +4.1 4,795,112 + Psyr_4026 0.60 +2.4 4,795,112 + Psyr_4026 0.60 +2.1 4,795,112 + Psyr_4026 0.60 +3.3 4,795,113 - Psyr_4026 0.60 -0.3 4,795,113 - Psyr_4026 0.60 +1.1 4,795,113 - Psyr_4026 0.60 -2.7 4,795,113 - Psyr_4026 0.60 +1.3 4,795,113 - Psyr_4026 0.60 +4.2 4,795,113 - Psyr_4026 0.60 -2.7 4,795,113 - Psyr_4026 0.60 -1.3 4,795,113 - Psyr_4026 0.60 -0.5 4,795,113 - Psyr_4026 0.60 +0.8 4,795,113 - Psyr_4026 0.60 +2.1 4,795,113 - Psyr_4026 0.60 -2.2 4,795,113 - Psyr_4026 0.60 -1.5 4,795,113 - Psyr_4026 0.60 -0.7 4,795,113 - Psyr_4026 0.60 +3.3 4,795,145 - Psyr_4026 0.63 +0.1 4,795,229 + Psyr_4026 0.69 +1.0 4,795,229 + Psyr_4026 0.69 +2.4 4,795,229 + Psyr_4026 0.69 -0.6 4,795,262 + Psyr_4026 0.72 -4.1 4,795,262 + Psyr_4026 0.72 -1.0 4,795,262 + Psyr_4026 0.72 +3.8 4,795,263 - Psyr_4026 0.72 +3.6 4,795,263 - Psyr_4026 0.72 -1.8 4,795,297 + Psyr_4026 0.74 -1.8 4,795,297 + Psyr_4026 0.74 +1.3 4,795,297 + Psyr_4026 0.74 +0.4 4,795,297 + Psyr_4026 0.74 -1.6 4,795,422 + Psyr_4026 0.84 +1.2 4,795,422 + Psyr_4026 0.84 -0.5 4,795,423 - Psyr_4026 0.84 +2.1 4,795,457 + Psyr_4026 0.87 +0.2 4,795,457 + Psyr_4026 0.87 +4.8 4,795,457 + Psyr_4026 0.87 +1.1 4,795,458 - Psyr_4026 0.87 +0.1 4,795,458 - Psyr_4026 0.87 -0.1 4,795,475 + Psyr_4026 0.88 +0.3 4,795,475 + Psyr_4026 0.88 +1.0 4,795,475 + Psyr_4026 0.88 -1.2 4,795,476 - Psyr_4026 0.88 +0.1 4,795,595 + -1.2 4,795,596 - -0.6 4,795,596 - +0.6 4,795,624 - -1.2 4,795,672 + +3.3 4,795,672 + +2.9 4,795,673 - +0.1 4,795,681 + -0.7 4,795,693 + Psyr_4027 0.10 -0.3 4,795,693 + Psyr_4027 0.10 -0.3 4,795,693 + Psyr_4027 0.10 -1.0 4,795,693 + Psyr_4027 0.10 -1.5 4,795,693 + Psyr_4027 0.10 -0.9 4,795,693 + Psyr_4027 0.10 -1.6 4,795,694 - Psyr_4027 0.11 +0.5 4,795,694 - Psyr_4027 0.11 +0.7 4,795,694 - Psyr_4027 0.11 +1.9 4,795,694 - Psyr_4027 0.11 +4.6 4,795,694 - Psyr_4027 0.11 -1.4 4,795,694 - Psyr_4027 0.11 +1.4 4,795,694 - Psyr_4027 0.11 -1.3 4,795,724 - Psyr_4027 0.19 -1.4 4,795,724 - Psyr_4027 0.19 -0.2 4,795,724 - Psyr_4027 0.19 +4.5 4,795,724 - Psyr_4027 0.19 +0.4 4,795,762 + Psyr_4027 0.29 +0.2 4,795,762 + Psyr_4027 0.29 +1.1 4,795,762 + Psyr_4027 0.29 +2.1 4,795,763 - Psyr_4027 0.30 +0.8 4,795,763 - Psyr_4027 0.30 -1.0 4,795,895 + Psyr_4027 0.66 +3.1 4,795,949 + Psyr_4027 0.81 +0.2 4,795,972 + Psyr_4027 0.88 +1.7 4,795,972 + Psyr_4027 0.88 +2.4 4,795,972 + Psyr_4027 0.88 -0.9 4,796,009 + +0.2 4,796,009 + -2.2 4,796,009 + +0.5 4,796,010 - +0.1 4,796,010 - +3.1 4,796,010 - -0.1 4,796,011 + -1.0 4,796,011 + +5.1 4,796,011 + +4.4 4,796,011 + -0.9 4,796,011 + -2.2 4,796,011 + -1.4 4,796,011 + -0.3 4,796,011 + +1.7 4,796,011 + +0.1 4,796,011 + -0.8 4,796,012 - -0.5 4,796,012 - +1.1 4,796,012 - +1.1 4,796,012 - -0.0 4,796,012 - -2.1 4,796,012 - -1.5 4,796,012 - +3.9 4,796,012 - +3.3 4,796,012 - -0.1 4,796,012 - +0.2 4,796,012 - +4.4 4,796,012 - +3.1 4,796,012 - +0.4 4,796,012 - +2.1 4,796,012 - +1.1 4,796,012 - -0.0 4,796,160 + -1.3 4,796,161 - -1.3 4,796,161 - +0.6 4,796,216 + -1.8 4,796,217 - +1.5 4,796,220 + +0.1 4,796,220 + +0.7 4,796,220 + -1.9 4,796,221 - +2.9 4,796,221 - -2.1 4,796,221 - +0.6 4,796,221 - +2.4 4,796,221 - +3.3 4,796,221 - +2.1 4,796,249 + -0.6 4,796,249 + -1.5 4,796,249 + -1.8 4,796,250 - +1.1 4,796,255 + +2.1 4,796,255 + +2.1 4,796,255 + -2.3 4,796,255 + -4.8 4,796,334 + Psyr_4028 0.29 +1.7 4,796,370 + Psyr_4028 0.38 +1.7 4,796,370 + Psyr_4028 0.38 +4.0 4,796,370 + Psyr_4028 0.38 +0.2 4,796,370 + Psyr_4028 0.38 +3.6 4,796,371 - Psyr_4028 0.38 -5.5 4,796,371 - Psyr_4028 0.38 -0.8 4,796,391 + Psyr_4028 0.43 +1.1 4,796,391 + Psyr_4028 0.43 -1.2 4,796,391 + Psyr_4028 0.43 +0.0 4,796,391 + Psyr_4028 0.43 -1.6 4,796,392 - Psyr_4028 0.44 -2.4 4,796,448 + Psyr_4028 0.58 -2.7 4,796,448 + Psyr_4028 0.58 -1.6 4,796,448 + Psyr_4028 0.58 +2.9 4,796,588 + +0.4 4,796,591 + +0.5 4,796,591 + -0.6 4,796,591 + -1.1 4,796,591 + +4.4 4,796,591 + +0.3 4,796,591 + +3.6 4,796,591 + -2.2 4,796,592 - +3.4 4,796,592 - +2.2 4,796,592 - -2.0 4,796,592 - +3.7 4,796,592 - +0.9 4,796,592 - -3.9 4,796,592 - -2.3 4,796,592 - +2.7 4,796,603 + -0.1 4,796,608 + +1.6 4,796,608 + +0.1 4,796,672 - -1.6 4,796,755 + +2.7 4,796,755 + -0.9 4,796,756 - +3.1 4,796,777 + +3.6 4,796,778 - +3.1 4,797,015 + Psyr_4029 0.15 -3.2
Or see this region's nucleotide sequence