Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3985 and Psyr_3986 are separated by 118 nucleotides Psyr_3986 and Psyr_3987 are separated by 24 nucleotides
Psyr_3985: Psyr_3985 - Pectate lyase/Amb allergen, at 4,743,013 to 4,744,278
_3985
Psyr_3986: Psyr_3986 - GCN5-related N-acetyltransferase, at 4,744,397 to 4,744,843
_3986
Psyr_3987: Psyr_3987 - Iron-containing alcohol dehydrogenase, at 4,744,868 to 4,746,016
_3987
Position (kb) 4744
4745 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 4743.466 kb on + strand, within Psyr_3985 at 4743.466 kb on + strand, within Psyr_3985 at 4743.466 kb on + strand, within Psyr_3985 at 4743.466 kb on + strand, within Psyr_3985 at 4743.466 kb on + strand, within Psyr_3985 at 4743.467 kb on - strand, within Psyr_3985 at 4743.467 kb on - strand, within Psyr_3985 at 4743.467 kb on - strand, within Psyr_3985 at 4743.467 kb on - strand, within Psyr_3985 at 4743.467 kb on - strand, within Psyr_3985 at 4743.467 kb on - strand, within Psyr_3985 at 4743.467 kb on - strand, within Psyr_3985 at 4743.467 kb on - strand, within Psyr_3985 at 4743.467 kb on - strand, within Psyr_3985 at 4743.467 kb on - strand, within Psyr_3985 at 4743.467 kb on - strand, within Psyr_3985 at 4743.470 kb on + strand, within Psyr_3985 at 4743.470 kb on + strand, within Psyr_3985 at 4743.470 kb on + strand, within Psyr_3985 at 4743.470 kb on + strand, within Psyr_3985 at 4743.470 kb on + strand, within Psyr_3985 at 4743.470 kb on + strand, within Psyr_3985 at 4743.470 kb on + strand, within Psyr_3985 at 4743.471 kb on - strand, within Psyr_3985 at 4743.471 kb on - strand, within Psyr_3985 at 4743.471 kb on - strand, within Psyr_3985 at 4743.471 kb on - strand, within Psyr_3985 at 4743.552 kb on - strand, within Psyr_3985 at 4743.869 kb on + strand, within Psyr_3985 at 4743.870 kb on - strand, within Psyr_3985 at 4743.870 kb on - strand, within Psyr_3985 at 4743.870 kb on - strand, within Psyr_3985 at 4743.996 kb on + strand, within Psyr_3985 at 4744.378 kb on + strand at 4744.379 kb on - strand at 4744.379 kb on - strand at 4744.453 kb on + strand, within Psyr_3986 at 4744.488 kb on + strand, within Psyr_3986 at 4744.489 kb on - strand, within Psyr_3986 at 4744.489 kb on - strand, within Psyr_3986 at 4744.707 kb on + strand, within Psyr_3986 at 4744.707 kb on + strand, within Psyr_3986 at 4744.707 kb on + strand, within Psyr_3986 at 4744.708 kb on - strand, within Psyr_3986 at 4744.767 kb on + strand, within Psyr_3986 at 4744.792 kb on + strand, within Psyr_3986 at 4744.858 kb on - strand at 4744.858 kb on - strand at 4744.886 kb on + strand at 4744.886 kb on + strand at 4744.886 kb on + strand at 4744.886 kb on + strand at 4744.886 kb on + strand at 4744.886 kb on + strand at 4744.887 kb on - strand at 4744.887 kb on - strand at 4744.887 kb on - strand at 4744.887 kb on - strand at 4744.889 kb on - strand at 4744.889 kb on - strand at 4744.996 kb on + strand, within Psyr_3987 at 4745.203 kb on - strand, within Psyr_3987 at 4745.203 kb on - strand, within Psyr_3987 at 4745.239 kb on - strand, within Psyr_3987 at 4745.369 kb on + strand, within Psyr_3987 at 4745.412 kb on + strand, within Psyr_3987 at 4745.412 kb on + strand, within Psyr_3987 at 4745.412 kb on + strand, within Psyr_3987 at 4745.412 kb on + strand, within Psyr_3987 at 4745.412 kb on + strand, within Psyr_3987 at 4745.412 kb on + strand, within Psyr_3987 at 4745.412 kb on + strand, within Psyr_3987 at 4745.412 kb on + strand, within Psyr_3987 at 4745.413 kb on - strand, within Psyr_3987 at 4745.413 kb on - strand, within Psyr_3987 at 4745.413 kb on - strand, within Psyr_3987 at 4745.413 kb on - strand, within Psyr_3987 at 4745.413 kb on - strand, within Psyr_3987 at 4745.413 kb on - strand, within Psyr_3987 at 4745.413 kb on - strand, within Psyr_3987 at 4745.413 kb on - strand, within Psyr_3987 at 4745.543 kb on + strand, within Psyr_3987 at 4745.543 kb on + strand, within Psyr_3987 at 4745.609 kb on - strand, within Psyr_3987 at 4745.661 kb on + strand, within Psyr_3987 at 4745.661 kb on + strand, within Psyr_3987 at 4745.671 kb on + strand, within Psyr_3987 at 4745.701 kb on + strand, within Psyr_3987 at 4745.826 kb on + strand, within Psyr_3987 at 4745.826 kb on + strand, within Psyr_3987 at 4745.826 kb on + strand, within Psyr_3987 at 4745.826 kb on + strand, within Psyr_3987 at 4745.827 kb on - strand, within Psyr_3987 at 4745.827 kb on - strand, within Psyr_3987 at 4745.827 kb on - strand, within Psyr_3987
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 4,743,466 + Psyr_3985 0.36 +2.4 4,743,466 + Psyr_3985 0.36 -0.3 4,743,466 + Psyr_3985 0.36 +0.7 4,743,466 + Psyr_3985 0.36 -1.4 4,743,466 + Psyr_3985 0.36 -0.3 4,743,467 - Psyr_3985 0.36 -1.3 4,743,467 - Psyr_3985 0.36 -1.6 4,743,467 - Psyr_3985 0.36 -2.5 4,743,467 - Psyr_3985 0.36 -2.6 4,743,467 - Psyr_3985 0.36 +2.1 4,743,467 - Psyr_3985 0.36 -3.5 4,743,467 - Psyr_3985 0.36 -1.3 4,743,467 - Psyr_3985 0.36 -0.6 4,743,467 - Psyr_3985 0.36 -0.6 4,743,467 - Psyr_3985 0.36 -1.6 4,743,467 - Psyr_3985 0.36 -2.3 4,743,470 + Psyr_3985 0.36 -2.8 4,743,470 + Psyr_3985 0.36 -1.8 4,743,470 + Psyr_3985 0.36 -0.2 4,743,470 + Psyr_3985 0.36 +2.9 4,743,470 + Psyr_3985 0.36 -1.0 4,743,470 + Psyr_3985 0.36 -3.9 4,743,470 + Psyr_3985 0.36 +2.9 4,743,471 - Psyr_3985 0.36 +3.8 4,743,471 - Psyr_3985 0.36 -2.3 4,743,471 - Psyr_3985 0.36 +2.4 4,743,471 - Psyr_3985 0.36 +0.1 4,743,552 - Psyr_3985 0.43 -4.3 4,743,869 + Psyr_3985 0.68 -0.5 4,743,870 - Psyr_3985 0.68 -2.5 4,743,870 - Psyr_3985 0.68 -1.3 4,743,870 - Psyr_3985 0.68 -2.2 4,743,996 + Psyr_3985 0.78 -2.7 4,744,378 + -0.4 4,744,379 - -0.0 4,744,379 - +2.9 4,744,453 + Psyr_3986 0.13 -1.2 4,744,488 + Psyr_3986 0.20 +3.1 4,744,489 - Psyr_3986 0.21 -0.5 4,744,489 - Psyr_3986 0.21 +1.1 4,744,707 + Psyr_3986 0.69 -4.5 4,744,707 + Psyr_3986 0.69 +0.1 4,744,707 + Psyr_3986 0.69 +2.1 4,744,708 - Psyr_3986 0.70 -1.5 4,744,767 + Psyr_3986 0.83 -1.8 4,744,792 + Psyr_3986 0.88 -0.8 4,744,858 - -4.2 4,744,858 - +1.1 4,744,886 + -3.1 4,744,886 + -1.5 4,744,886 + -0.7 4,744,886 + -0.9 4,744,886 + -2.6 4,744,886 + +2.7 4,744,887 - -0.6 4,744,887 - +3.7 4,744,887 - -1.0 4,744,887 - -1.2 4,744,889 - +0.1 4,744,889 - -4.4 4,744,996 + Psyr_3987 0.11 +3.7 4,745,203 - Psyr_3987 0.29 +2.9 4,745,203 - Psyr_3987 0.29 +5.0 4,745,239 - Psyr_3987 0.32 -0.8 4,745,369 + Psyr_3987 0.44 +2.9 4,745,412 + Psyr_3987 0.47 +0.1 4,745,412 + Psyr_3987 0.47 +3.4 4,745,412 + Psyr_3987 0.47 -1.4 4,745,412 + Psyr_3987 0.47 -1.7 4,745,412 + Psyr_3987 0.47 +2.7 4,745,412 + Psyr_3987 0.47 -2.1 4,745,412 + Psyr_3987 0.47 -0.8 4,745,412 + Psyr_3987 0.47 +3.9 4,745,413 - Psyr_3987 0.47 -2.0 4,745,413 - Psyr_3987 0.47 -2.0 4,745,413 - Psyr_3987 0.47 +1.5 4,745,413 - Psyr_3987 0.47 -2.6 4,745,413 - Psyr_3987 0.47 +3.8 4,745,413 - Psyr_3987 0.47 +0.1 4,745,413 - Psyr_3987 0.47 -0.2 4,745,413 - Psyr_3987 0.47 -1.9 4,745,543 + Psyr_3987 0.59 +1.1 4,745,543 + Psyr_3987 0.59 +1.1 4,745,609 - Psyr_3987 0.64 -1.6 4,745,661 + Psyr_3987 0.69 -0.6 4,745,661 + Psyr_3987 0.69 -0.7 4,745,671 + Psyr_3987 0.70 +0.1 4,745,701 + Psyr_3987 0.72 -3.6 4,745,826 + Psyr_3987 0.83 -0.9 4,745,826 + Psyr_3987 0.83 -1.6 4,745,826 + Psyr_3987 0.83 +3.4 4,745,826 + Psyr_3987 0.83 +2.9 4,745,827 - Psyr_3987 0.83 -3.3 4,745,827 - Psyr_3987 0.83 -1.0 4,745,827 - Psyr_3987 0.83 -1.7
Or see this region's nucleotide sequence