Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3933
Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | KB with Mitomycin C 0.625 ug/ml |
|---|---|---|---|---|---|
| remove | |||||
| 4,678,264 | + | Psyr_3932 | 0.25 | +1.7 | |
| 4,678,265 | - | Psyr_3932 | 0.25 | -0.8 | |
| 4,678,265 | - | Psyr_3932 | 0.25 | +0.5 | |
| 4,678,464 | + | Psyr_3932 | 0.45 | -0.8 | |
| 4,679,158 | + | Psyr_3933 | 0.46 | -1.2 | |
| 4,679,158 | + | Psyr_3933 | 0.46 | +2.1 | |
| 4,679,159 | - | Psyr_3933 | 0.47 | +3.7 | |
| 4,679,226 | - | Psyr_3933 | 0.69 | +2.9 | |
| 4,679,226 | - | Psyr_3933 | 0.69 | -3.9 | |
| 4,679,776 | - | Psyr_3934 | 0.58 | +1.7 | |
| 4,680,015 | - | Psyr_3934 | 0.90 | +0.4 |
Or see this region's nucleotide sequence