Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3863

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
4,601,230	+				+0.1
4,601,231	-				-0.7
4,601,231	-				+0.7
4,601,475	+		Psyr_3861	0.89	-2.5
4,601,575	-				-2.0
4,601,586	-				-2.2
4,601,626	+				-2.7
4,601,626	+				+0.9
4,601,626	+				+0.1
4,601,626	+				+2.1
4,601,626	+				+3.8
4,601,626	+				+3.3
4,601,626	+				-0.7
4,601,626	+				-1.5
4,601,626	+				+2.9
4,601,626	+				-1.1
4,601,627	-				+0.1
4,601,627	-				+3.1
4,601,627	-				+1.1
4,601,627	-				+2.1
4,601,627	-				-1.5
4,601,627	-				-2.0
4,601,627	-				+0.1
4,601,627	-				+4.3
4,601,627	-				+4.0
4,601,627	-				-2.6
4,601,627	-				+2.3
4,601,627	-				+2.1
4,601,696	-				+2.9
4,601,749	-				+0.7
4,601,749	-				+2.3
4,602,129	+		Psyr_3862	0.81	-4.4
4,602,129	+		Psyr_3862	0.81	+0.3
4,602,133	+		Psyr_3862	0.82	-0.3
4,602,134	-		Psyr_3862	0.82	+2.1
4,602,134	-		Psyr_3862	0.82	-1.3
4,602,148	+		Psyr_3862	0.85	-1.4
4,602,181	+				-0.3
4,602,182	-				+4.1
4,602,182	-				-0.2
4,602,212	-				+2.7
4,602,212	-				+3.8
4,602,212	-				+2.7
4,602,212	-				+0.4
4,602,225	+				-2.3
4,602,225	+				+2.7
4,602,225	+				+1.1
4,602,225	+				-1.8
4,602,225	+				+0.9
4,602,225	+				+3.3
4,602,225	+				+3.1
4,602,225	+				+4.5
4,602,226	-				-2.1
4,602,226	-				+3.1
4,602,226	-				+2.9
4,602,226	-				+0.8
4,602,231	+				-1.8
4,602,338	-		Psyr_3863	0.24	-0.1
4,602,346	+		Psyr_3863	0.25	+0.1
4,602,346	+		Psyr_3863	0.25	+1.1
4,602,347	-		Psyr_3863	0.26	-1.8
4,602,347	-		Psyr_3863	0.26	+1.1
4,602,347	-		Psyr_3863	0.26	-0.9
4,602,381	+		Psyr_3863	0.33	+3.6
4,602,381	+		Psyr_3863	0.33	+0.2
4,602,381	+		Psyr_3863	0.33	+2.7
4,602,382	-		Psyr_3863	0.33	-1.9
4,602,464	+		Psyr_3863	0.50	-1.1
4,602,465	-		Psyr_3863	0.50	+2.1
4,602,465	-		Psyr_3863	0.50	+1.7
4,602,555	+		Psyr_3863	0.69	+1.1
4,602,596	-		Psyr_3863	0.78	+2.4
4,602,596	-		Psyr_3863	0.78	+0.3
4,602,600	+		Psyr_3863	0.79	+1.5
4,602,601	-		Psyr_3863	0.79	-1.2
4,602,634	-		Psyr_3863	0.86	-3.4
4,602,688	+				-1.9
4,602,689	-				+2.7
4,602,689	-				-4.1
4,602,689	-				-1.5
4,602,689	-				+2.9
4,602,689	-				-0.9
4,602,689	-				-3.5
4,602,689	-				-1.5
4,602,689	-				-1.5
4,602,856	-				+2.7
4,603,155	+				+2.9
4,603,155	+				+0.5
4,603,155	+				+2.4
4,603,155	+				-0.8
4,603,155	+				-0.9
4,603,155	+				-1.5
4,603,155	+				+3.6
4,603,155	+				-1.1
4,603,155	+				+4.4
4,603,155	+				-0.4
4,603,155	+				+1.4
4,603,155	+				-2.7
4,603,155	+				-1.0
4,603,155	+				+0.1
4,603,155	+				+2.2
4,603,228	-				+0.4
4,603,315	+				-1.9
4,603,364	-				+1.7
4,603,364	-				-3.3
4,603,381	+				-1.3
4,603,381	+				+2.9
4,603,381	+				+5.2
4,603,381	+				+3.6
4,603,513	+				+4.5
4,603,513	+				+2.4
4,603,513	+				-0.8
4,603,513	+				+2.4
4,603,514	-				-0.5
4,603,514	-				+0.1
4,603,528	+				+2.7
4,603,528	+				-0.0
4,603,528	+				+1.7
4,603,528	+				+1.9
4,603,529	-				-4.0
4,603,561	-		Psyr_3864	0.10	+1.1
4,603,576	+		Psyr_3864	0.11	-3.2
4,603,577	-		Psyr_3864	0.11	+0.1
4,603,585	+		Psyr_3864	0.11	+2.1
4,603,586	-		Psyr_3864	0.11	+0.1
4,603,586	-		Psyr_3864	0.11	-1.0