Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3568 and Psyr_3569 are separated by 1 nucleotides Psyr_3569 and Psyr_3570 overlap by 4 nucleotides Psyr_3570 and Psyr_3571 are separated by 76 nucleotides
Psyr_3568: Psyr_3568 - Succinylglutamate desuccinylase/aspartoacylase, at 4,249,849 to 4,250,961
_3568
Psyr_3569: Psyr_3569 - L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein, at 4,250,963 to 4,251,661
_3569
Psyr_3570: Psyr_3570 - L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein, at 4,251,658 to 4,252,347
_3570
Psyr_3571: Psyr_3571 - L-arginine-binding protein / L-ornithine-binding protein, at 4,252,424 to 4,253,200
_3571
Position (kb) 4251
4252
4253 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 4250.867 kb on + strand at 4250.867 kb on + strand at 4250.867 kb on + strand at 4250.867 kb on + strand at 4250.867 kb on + strand at 4250.867 kb on + strand at 4250.867 kb on + strand at 4250.868 kb on - strand at 4250.868 kb on - strand at 4250.868 kb on - strand at 4250.941 kb on + strand at 4250.941 kb on + strand at 4250.941 kb on + strand at 4250.941 kb on + strand at 4250.941 kb on + strand at 4250.941 kb on + strand at 4250.942 kb on - strand at 4250.942 kb on - strand at 4250.942 kb on - strand at 4250.942 kb on - strand at 4250.942 kb on - strand at 4250.942 kb on - strand at 4251.049 kb on - strand, within Psyr_3569 at 4251.067 kb on + strand, within Psyr_3569 at 4251.067 kb on + strand, within Psyr_3569 at 4251.067 kb on + strand, within Psyr_3569 at 4251.068 kb on - strand, within Psyr_3569 at 4251.068 kb on - strand, within Psyr_3569 at 4251.068 kb on - strand, within Psyr_3569 at 4251.068 kb on - strand, within Psyr_3569 at 4251.069 kb on + strand, within Psyr_3569 at 4251.069 kb on + strand, within Psyr_3569 at 4251.069 kb on + strand, within Psyr_3569 at 4251.069 kb on + strand, within Psyr_3569 at 4251.069 kb on + strand, within Psyr_3569 at 4251.069 kb on + strand, within Psyr_3569 at 4251.069 kb on + strand, within Psyr_3569 at 4251.069 kb on + strand, within Psyr_3569 at 4251.069 kb on + strand, within Psyr_3569 at 4251.069 kb on + strand, within Psyr_3569 at 4251.069 kb on + strand, within Psyr_3569 at 4251.070 kb on - strand, within Psyr_3569 at 4251.070 kb on - strand, within Psyr_3569 at 4251.070 kb on - strand, within Psyr_3569 at 4251.070 kb on - strand, within Psyr_3569 at 4251.070 kb on - strand, within Psyr_3569 at 4251.070 kb on - strand, within Psyr_3569 at 4251.070 kb on - strand, within Psyr_3569 at 4251.070 kb on - strand, within Psyr_3569 at 4251.070 kb on - strand, within Psyr_3569 at 4251.070 kb on - strand, within Psyr_3569 at 4251.070 kb on - strand at 4251.070 kb on - strand, within Psyr_3569 at 4251.070 kb on - strand, within Psyr_3569 at 4251.087 kb on + strand, within Psyr_3569 at 4251.087 kb on + strand, within Psyr_3569 at 4251.088 kb on - strand, within Psyr_3569 at 4251.088 kb on - strand, within Psyr_3569 at 4251.189 kb on + strand, within Psyr_3569 at 4251.436 kb on - strand, within Psyr_3569 at 4251.436 kb on - strand, within Psyr_3569 at 4251.438 kb on + strand, within Psyr_3569 at 4251.438 kb on + strand, within Psyr_3569 at 4251.438 kb on + strand, within Psyr_3569 at 4251.439 kb on - strand, within Psyr_3569 at 4251.439 kb on - strand, within Psyr_3569 at 4251.439 kb on - strand, within Psyr_3569 at 4251.483 kb on + strand, within Psyr_3569 at 4251.483 kb on + strand, within Psyr_3569 at 4251.483 kb on + strand, within Psyr_3569 at 4251.483 kb on + strand, within Psyr_3569 at 4251.483 kb on + strand, within Psyr_3569 at 4251.484 kb on - strand, within Psyr_3569 at 4251.484 kb on - strand, within Psyr_3569 at 4251.484 kb on - strand, within Psyr_3569 at 4251.484 kb on - strand, within Psyr_3569 at 4251.484 kb on - strand, within Psyr_3569 at 4251.484 kb on - strand, within Psyr_3569 at 4251.489 kb on + strand, within Psyr_3569 at 4251.489 kb on + strand, within Psyr_3569 at 4251.489 kb on + strand, within Psyr_3569 at 4251.490 kb on - strand, within Psyr_3569 at 4251.648 kb on + strand at 4251.649 kb on - strand at 4251.661 kb on + strand at 4251.661 kb on + strand at 4251.661 kb on + strand at 4251.661 kb on + strand at 4251.661 kb on + strand at 4251.661 kb on + strand at 4251.661 kb on + strand at 4251.662 kb on - strand at 4251.743 kb on + strand, within Psyr_3570 at 4251.744 kb on - strand, within Psyr_3570 at 4251.744 kb on - strand, within Psyr_3570 at 4251.744 kb on - strand, within Psyr_3570 at 4251.744 kb on - strand, within Psyr_3570 at 4251.956 kb on + strand, within Psyr_3570 at 4251.957 kb on - strand, within Psyr_3570 at 4252.025 kb on + strand, within Psyr_3570 at 4252.025 kb on + strand, within Psyr_3570 at 4252.038 kb on + strand, within Psyr_3570 at 4252.039 kb on - strand, within Psyr_3570 at 4252.193 kb on + strand, within Psyr_3570 at 4252.194 kb on - strand, within Psyr_3570 at 4252.373 kb on - strand at 4252.425 kb on + strand at 4252.425 kb on + strand at 4252.426 kb on - strand at 4252.426 kb on - strand at 4252.452 kb on + strand at 4252.452 kb on + strand at 4252.453 kb on - strand at 4252.453 kb on - strand at 4252.473 kb on + strand at 4252.473 kb on + strand at 4252.473 kb on + strand at 4252.474 kb on - strand at 4252.474 kb on - strand at 4252.474 kb on - strand at 4252.474 kb on - strand at 4252.474 kb on - strand at 4252.573 kb on - strand, within Psyr_3571 at 4252.598 kb on + strand, within Psyr_3571 at 4252.599 kb on - strand, within Psyr_3571 at 4252.599 kb on - strand, within Psyr_3571 at 4252.702 kb on - strand, within Psyr_3571 at 4252.702 kb on - strand, within Psyr_3571 at 4252.723 kb on - strand, within Psyr_3571 at 4252.793 kb on + strand, within Psyr_3571 at 4252.878 kb on + strand, within Psyr_3571 at 4252.879 kb on - strand, within Psyr_3571 at 4252.879 kb on - strand, within Psyr_3571 at 4252.879 kb on - strand, within Psyr_3571 at 4252.879 kb on - strand, within Psyr_3571 at 4252.879 kb on - strand, within Psyr_3571 at 4252.882 kb on - strand, within Psyr_3571 at 4252.882 kb on - strand, within Psyr_3571 at 4252.882 kb on - strand, within Psyr_3571 at 4252.882 kb on - strand, within Psyr_3571 at 4252.882 kb on - strand, within Psyr_3571 at 4252.976 kb on - strand, within Psyr_3571
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 4,250,867 + +0.0 4,250,867 + +0.0 4,250,867 + +0.0 4,250,867 + -3.5 4,250,867 + +4.0 4,250,867 + +0.0 4,250,867 + +0.0 4,250,868 - -1.9 4,250,868 - -2.1 4,250,868 - -2.7 4,250,941 + -2.5 4,250,941 + +0.0 4,250,941 + +3.0 4,250,941 + -3.4 4,250,941 + +1.6 4,250,941 + -3.7 4,250,942 - -1.6 4,250,942 - -1.5 4,250,942 - -0.4 4,250,942 - +0.0 4,250,942 - +1.6 4,250,942 - +3.9 4,251,049 - Psyr_3569 0.12 -0.3 4,251,067 + Psyr_3569 0.15 +1.6 4,251,067 + Psyr_3569 0.15 -0.5 4,251,067 + Psyr_3569 0.15 -1.3 4,251,068 - Psyr_3569 0.15 -1.2 4,251,068 - Psyr_3569 0.15 -2.1 4,251,068 - Psyr_3569 0.15 -1.6 4,251,068 - Psyr_3569 0.15 +1.6 4,251,069 + Psyr_3569 0.15 -1.7 4,251,069 + Psyr_3569 0.15 -3.7 4,251,069 + Psyr_3569 0.15 -2.5 4,251,069 + Psyr_3569 0.15 +0.0 4,251,069 + Psyr_3569 0.15 +1.0 4,251,069 + Psyr_3569 0.15 -1.7 4,251,069 + Psyr_3569 0.15 +1.0 4,251,069 + Psyr_3569 0.15 -3.9 4,251,069 + Psyr_3569 0.15 +1.0 4,251,069 + Psyr_3569 0.15 +3.6 4,251,069 + Psyr_3569 0.15 +4.0 4,251,070 - Psyr_3569 0.15 +1.6 4,251,070 - Psyr_3569 0.15 -3.4 4,251,070 - Psyr_3569 0.15 +4.4 4,251,070 - Psyr_3569 0.15 -0.5 4,251,070 - Psyr_3569 0.15 -0.4 4,251,070 - Psyr_3569 0.15 +1.6 4,251,070 - Psyr_3569 0.15 +1.0 4,251,070 - Psyr_3569 0.15 +3.0 4,251,070 - Psyr_3569 0.15 +2.4 4,251,070 - Psyr_3569 0.15 -1.7 4,251,070 - +2.4 4,251,070 - Psyr_3569 0.15 +0.0 4,251,070 - Psyr_3569 0.15 -0.8 4,251,087 + Psyr_3569 0.18 -1.0 4,251,087 + Psyr_3569 0.18 +0.0 4,251,088 - Psyr_3569 0.18 +1.0 4,251,088 - Psyr_3569 0.18 +0.0 4,251,189 + Psyr_3569 0.32 +1.6 4,251,436 - Psyr_3569 0.68 +2.4 4,251,436 - Psyr_3569 0.68 -0.5 4,251,438 + Psyr_3569 0.68 +0.0 4,251,438 + Psyr_3569 0.68 +1.0 4,251,438 + Psyr_3569 0.68 +2.0 4,251,439 - Psyr_3569 0.68 +2.4 4,251,439 - Psyr_3569 0.68 +0.0 4,251,439 - Psyr_3569 0.68 -2.2 4,251,483 + Psyr_3569 0.74 +0.2 4,251,483 + Psyr_3569 0.74 +1.6 4,251,483 + Psyr_3569 0.74 +2.0 4,251,483 + Psyr_3569 0.74 +3.2 4,251,483 + Psyr_3569 0.74 +2.9 4,251,484 - Psyr_3569 0.75 -1.3 4,251,484 - Psyr_3569 0.75 +0.4 4,251,484 - Psyr_3569 0.75 +1.0 4,251,484 - Psyr_3569 0.75 +0.0 4,251,484 - Psyr_3569 0.75 -1.5 4,251,484 - Psyr_3569 0.75 -3.8 4,251,489 + Psyr_3569 0.75 -2.4 4,251,489 + Psyr_3569 0.75 +2.6 4,251,489 + Psyr_3569 0.75 +1.0 4,251,490 - Psyr_3569 0.75 -1.1 4,251,648 + -1.1 4,251,649 - +0.0 4,251,661 + +1.6 4,251,661 + -0.8 4,251,661 + +0.0 4,251,661 + -2.3 4,251,661 + -1.4 4,251,661 + +1.0 4,251,661 + -3.2 4,251,662 - -3.1 4,251,743 + Psyr_3570 0.12 -1.2 4,251,744 - Psyr_3570 0.12 +0.0 4,251,744 - Psyr_3570 0.12 -2.0 4,251,744 - Psyr_3570 0.12 -2.5 4,251,744 - Psyr_3570 0.12 +3.6 4,251,956 + Psyr_3570 0.43 +2.6 4,251,957 - Psyr_3570 0.43 -1.1 4,252,025 + Psyr_3570 0.53 +2.0 4,252,025 + Psyr_3570 0.53 -1.8 4,252,038 + Psyr_3570 0.55 -1.6 4,252,039 - Psyr_3570 0.55 -0.6 4,252,193 + Psyr_3570 0.78 +0.0 4,252,194 - Psyr_3570 0.78 -3.0 4,252,373 - -2.6 4,252,425 + -2.5 4,252,425 + +2.1 4,252,426 - +0.4 4,252,426 - +3.4 4,252,452 + -0.5 4,252,452 + +0.1 4,252,453 - -1.0 4,252,453 - +1.6 4,252,473 + +2.4 4,252,473 + +0.1 4,252,473 + -2.5 4,252,474 - +5.1 4,252,474 - -4.3 4,252,474 - +2.4 4,252,474 - -4.0 4,252,474 - -1.1 4,252,573 - Psyr_3571 0.19 +0.9 4,252,598 + Psyr_3571 0.22 +0.1 4,252,599 - Psyr_3571 0.23 +0.1 4,252,599 - Psyr_3571 0.23 -0.8 4,252,702 - Psyr_3571 0.36 +2.4 4,252,702 - Psyr_3571 0.36 -1.5 4,252,723 - Psyr_3571 0.38 +0.6 4,252,793 + Psyr_3571 0.47 -0.2 4,252,878 + Psyr_3571 0.58 -2.9 4,252,879 - Psyr_3571 0.59 -2.2 4,252,879 - Psyr_3571 0.59 -0.5 4,252,879 - Psyr_3571 0.59 +2.4 4,252,879 - Psyr_3571 0.59 +3.4 4,252,879 - Psyr_3571 0.59 -0.8 4,252,882 - Psyr_3571 0.59 +4.1 4,252,882 - Psyr_3571 0.59 +2.1 4,252,882 - Psyr_3571 0.59 -1.6 4,252,882 - Psyr_3571 0.59 +0.1 4,252,882 - Psyr_3571 0.59 +2.9 4,252,976 - Psyr_3571 0.71 +0.1
Or see this region's nucleotide sequence