Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3466 and Psyr_3467 are separated by 328 nucleotides Psyr_3467 and Psyr_3468 are separated by 305 nucleotides
Psyr_3466: Psyr_3466 - Flagellin, C-terminal:Flagellin, N-terminal, at 4,129,689 to 4,130,537
_3466
Psyr_3467: Psyr_3467 - 3-oxoacyl-[acyl-carrier protein] synthase, at 4,130,866 to 4,131,795
_3467
Psyr_3468: Psyr_3468 - Glycosyl transferase, family 2, at 4,132,101 to 4,135,007
_3468
Position (kb) 4130
4131
4132 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 4130.150 kb on + strand, within Psyr_3466 at 4130.151 kb on - strand, within Psyr_3466 at 4130.264 kb on + strand at 4130.264 kb on + strand at 4130.324 kb on + strand at 4130.325 kb on - strand, within Psyr_3466 at 4130.326 kb on - strand, within Psyr_3466 at 4130.384 kb on + strand, within Psyr_3466 at 4130.511 kb on + strand at 4130.511 kb on + strand at 4130.511 kb on + strand at 4130.511 kb on + strand at 4130.524 kb on - strand at 4130.562 kb on - strand at 4130.564 kb on + strand at 4130.564 kb on + strand at 4130.564 kb on + strand at 4130.564 kb on + strand at 4130.565 kb on - strand at 4130.565 kb on - strand at 4130.565 kb on - strand at 4130.565 kb on - strand at 4130.602 kb on - strand at 4130.615 kb on - strand at 4130.617 kb on + strand at 4130.617 kb on + strand at 4130.617 kb on + strand at 4130.618 kb on - strand at 4130.618 kb on - strand at 4130.618 kb on - strand at 4130.689 kb on + strand at 4130.689 kb on + strand at 4130.797 kb on + strand at 4130.797 kb on + strand at 4130.797 kb on + strand at 4130.797 kb on + strand at 4130.798 kb on - strand at 4130.805 kb on + strand at 4130.805 kb on + strand at 4130.806 kb on - strand at 4130.810 kb on - strand at 4130.810 kb on - strand at 4130.814 kb on + strand at 4130.875 kb on - strand at 4130.875 kb on - strand at 4130.876 kb on + strand at 4130.877 kb on - strand at 4131.925 kb on + strand at 4132.150 kb on + strand at 4132.150 kb on + strand at 4132.150 kb on + strand at 4132.150 kb on + strand at 4132.150 kb on + strand at 4132.151 kb on - strand at 4132.151 kb on - strand at 4132.260 kb on + strand at 4132.357 kb on + strand at 4132.357 kb on + strand at 4132.357 kb on + strand at 4132.358 kb on - strand at 4132.402 kb on + strand, within Psyr_3468 at 4132.402 kb on + strand, within Psyr_3468 at 4132.402 kb on + strand, within Psyr_3468 at 4132.402 kb on + strand, within Psyr_3468 at 4132.402 kb on + strand, within Psyr_3468 at 4132.402 kb on + strand, within Psyr_3468 at 4132.402 kb on + strand, within Psyr_3468 at 4132.402 kb on + strand at 4132.403 kb on - strand, within Psyr_3468 at 4132.403 kb on - strand, within Psyr_3468 at 4132.430 kb on + strand, within Psyr_3468 at 4132.430 kb on + strand, within Psyr_3468 at 4132.430 kb on + strand, within Psyr_3468 at 4132.431 kb on - strand, within Psyr_3468 at 4132.431 kb on - strand, within Psyr_3468 at 4132.431 kb on - strand, within Psyr_3468 at 4132.431 kb on - strand, within Psyr_3468 at 4132.432 kb on + strand, within Psyr_3468 at 4132.432 kb on + strand, within Psyr_3468 at 4132.433 kb on - strand, within Psyr_3468 at 4132.433 kb on - strand, within Psyr_3468 at 4132.433 kb on - strand, within Psyr_3468 at 4132.545 kb on + strand, within Psyr_3468 at 4132.639 kb on + strand, within Psyr_3468
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 4,130,150 + Psyr_3466 0.54 -0.8 4,130,151 - Psyr_3466 0.54 -1.3 4,130,264 + +0.0 4,130,264 + +0.0 4,130,324 + +0.0 4,130,325 - Psyr_3466 0.75 -4.2 4,130,326 - Psyr_3466 0.75 +0.0 4,130,384 + Psyr_3466 0.82 -3.6 4,130,511 + +0.0 4,130,511 + +2.0 4,130,511 + -2.6 4,130,511 + +0.0 4,130,524 - +0.0 4,130,562 - +3.6 4,130,564 + +1.6 4,130,564 + -2.2 4,130,564 + +1.0 4,130,564 + -2.1 4,130,565 - +2.3 4,130,565 - +2.6 4,130,565 - +3.6 4,130,565 - +4.2 4,130,602 - +4.0 4,130,615 - -2.5 4,130,617 + -3.6 4,130,617 + -0.2 4,130,617 + +0.0 4,130,618 - +2.0 4,130,618 - -1.4 4,130,618 - +3.8 4,130,689 + -1.4 4,130,689 + -1.4 4,130,797 + +1.6 4,130,797 + -1.4 4,130,797 + -0.6 4,130,797 + +0.0 4,130,798 - -1.6 4,130,805 + -1.3 4,130,805 + +1.2 4,130,806 - -2.8 4,130,810 - -4.8 4,130,810 - +0.0 4,130,814 + +3.6 4,130,875 - -1.0 4,130,875 - +2.6 4,130,876 + +0.0 4,130,877 - +1.6 4,131,925 + +0.5 4,132,150 + -2.8 4,132,150 + +0.0 4,132,150 + +0.2 4,132,150 + +2.6 4,132,150 + +1.0 4,132,151 - -2.5 4,132,151 - -0.8 4,132,260 + +0.1 4,132,357 + -1.1 4,132,357 + +1.0 4,132,357 + -1.6 4,132,358 - +1.0 4,132,402 + Psyr_3468 0.10 +3.7 4,132,402 + Psyr_3468 0.10 -1.4 4,132,402 + Psyr_3468 0.10 -2.1 4,132,402 + Psyr_3468 0.10 +1.0 4,132,402 + Psyr_3468 0.10 +2.0 4,132,402 + Psyr_3468 0.10 +3.5 4,132,402 + Psyr_3468 0.10 +1.3 4,132,402 + +0.0 4,132,403 - Psyr_3468 0.10 +3.6 4,132,403 - Psyr_3468 0.10 +4.1 4,132,430 + Psyr_3468 0.11 -0.7 4,132,430 + Psyr_3468 0.11 +2.3 4,132,430 + Psyr_3468 0.11 +3.3 4,132,431 - Psyr_3468 0.11 +2.6 4,132,431 - Psyr_3468 0.11 -2.5 4,132,431 - Psyr_3468 0.11 +2.0 4,132,431 - Psyr_3468 0.11 +1.3 4,132,432 + Psyr_3468 0.11 -3.4 4,132,432 + Psyr_3468 0.11 -1.6 4,132,433 - Psyr_3468 0.11 -3.0 4,132,433 - Psyr_3468 0.11 +0.0 4,132,433 - Psyr_3468 0.11 +0.0 4,132,545 + Psyr_3468 0.15 +0.0 4,132,639 + Psyr_3468 0.19 +1.6
Or see this region's nucleotide sequence