Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3464 and Psyr_3465 are separated by 83 nucleotides Psyr_3465 and Psyr_3466 are separated by 72 nucleotides Psyr_3466 and Psyr_3467 are separated by 328 nucleotides
Psyr_3464: Psyr_3464 - Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal:Flagellin hook IN, at 4,127,689 to 4,129,140
_3464
Psyr_3465: Psyr_3465 - Flagellar protein FlaG protein, at 4,129,224 to 4,129,616
_3465
Psyr_3466: Psyr_3466 - Flagellin, C-terminal:Flagellin, N-terminal, at 4,129,689 to 4,130,537
_3466
Psyr_3467: Psyr_3467 - 3-oxoacyl-[acyl-carrier protein] synthase, at 4,130,866 to 4,131,795
_3467
Position (kb) 4129
4130
4131 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2
3
4
5 at 4128.719 kb on + strand, within Psyr_3464 at 4128.719 kb on + strand, within Psyr_3464 at 4128.719 kb on + strand, within Psyr_3464 at 4128.719 kb on + strand, within Psyr_3464 at 4128.720 kb on - strand, within Psyr_3464 at 4128.720 kb on - strand, within Psyr_3464 at 4128.763 kb on - strand, within Psyr_3464 at 4128.763 kb on - strand, within Psyr_3464 at 4128.763 kb on - strand, within Psyr_3464 at 4128.763 kb on - strand, within Psyr_3464 at 4128.891 kb on + strand, within Psyr_3464 at 4128.891 kb on + strand, within Psyr_3464 at 4128.891 kb on + strand, within Psyr_3464 at 4128.892 kb on - strand, within Psyr_3464 at 4128.892 kb on - strand, within Psyr_3464 at 4128.892 kb on - strand, within Psyr_3464 at 4128.892 kb on - strand, within Psyr_3464 at 4128.892 kb on - strand, within Psyr_3464 at 4128.900 kb on + strand, within Psyr_3464 at 4128.900 kb on + strand, within Psyr_3464 at 4128.901 kb on - strand, within Psyr_3464 at 4128.901 kb on - strand, within Psyr_3464 at 4129.111 kb on - strand at 4129.119 kb on + strand at 4129.119 kb on + strand at 4129.119 kb on + strand at 4129.119 kb on + strand at 4129.119 kb on + strand at 4129.119 kb on + strand at 4129.120 kb on - strand at 4129.120 kb on - strand at 4129.120 kb on - strand at 4129.120 kb on - strand at 4129.120 kb on - strand at 4129.120 kb on - strand at 4129.125 kb on + strand at 4129.125 kb on + strand at 4129.125 kb on + strand at 4129.126 kb on - strand at 4129.126 kb on - strand at 4129.126 kb on - strand at 4129.126 kb on - strand at 4129.126 kb on - strand at 4129.308 kb on + strand, within Psyr_3465 at 4129.308 kb on + strand, within Psyr_3465 at 4129.308 kb on + strand, within Psyr_3465 at 4129.308 kb on + strand, within Psyr_3465 at 4129.309 kb on - strand, within Psyr_3465 at 4129.311 kb on + strand, within Psyr_3465 at 4129.311 kb on + strand, within Psyr_3465 at 4129.311 kb on + strand, within Psyr_3465 at 4129.311 kb on + strand, within Psyr_3465 at 4129.312 kb on - strand, within Psyr_3465 at 4129.312 kb on - strand, within Psyr_3465 at 4129.312 kb on - strand, within Psyr_3465 at 4129.312 kb on - strand, within Psyr_3465 at 4129.439 kb on + strand, within Psyr_3465 at 4129.439 kb on + strand, within Psyr_3465 at 4129.482 kb on - strand, within Psyr_3465 at 4129.482 kb on - strand, within Psyr_3465 at 4129.482 kb on - strand, within Psyr_3465 at 4129.482 kb on - strand, within Psyr_3465 at 4129.611 kb on - strand at 4129.657 kb on + strand at 4129.657 kb on + strand at 4129.658 kb on - strand at 4129.658 kb on - strand at 4129.658 kb on - strand at 4129.690 kb on + strand at 4129.691 kb on - strand at 4130.150 kb on + strand, within Psyr_3466 at 4130.151 kb on - strand, within Psyr_3466 at 4130.264 kb on + strand at 4130.264 kb on + strand at 4130.324 kb on + strand at 4130.325 kb on - strand, within Psyr_3466 at 4130.326 kb on - strand, within Psyr_3466 at 4130.384 kb on + strand, within Psyr_3466 at 4130.511 kb on + strand at 4130.511 kb on + strand at 4130.511 kb on + strand at 4130.511 kb on + strand at 4130.524 kb on - strand at 4130.562 kb on - strand at 4130.564 kb on + strand at 4130.564 kb on + strand at 4130.564 kb on + strand at 4130.564 kb on + strand at 4130.565 kb on - strand at 4130.565 kb on - strand at 4130.565 kb on - strand at 4130.565 kb on - strand at 4130.602 kb on - strand at 4130.615 kb on - strand at 4130.617 kb on + strand at 4130.617 kb on + strand at 4130.617 kb on + strand at 4130.618 kb on - strand at 4130.618 kb on - strand at 4130.618 kb on - strand at 4130.689 kb on + strand at 4130.689 kb on + strand at 4130.797 kb on + strand at 4130.797 kb on + strand at 4130.797 kb on + strand at 4130.797 kb on + strand at 4130.798 kb on - strand at 4130.805 kb on + strand at 4130.805 kb on + strand at 4130.806 kb on - strand at 4130.810 kb on - strand at 4130.810 kb on - strand at 4130.814 kb on + strand at 4130.875 kb on - strand at 4130.875 kb on - strand at 4130.876 kb on + strand at 4130.877 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 4,128,719 + Psyr_3464 0.71 +1.6 4,128,719 + Psyr_3464 0.71 +3.7 4,128,719 + Psyr_3464 0.71 -3.7 4,128,719 + Psyr_3464 0.71 -2.1 4,128,720 - Psyr_3464 0.71 +0.0 4,128,720 - Psyr_3464 0.71 -0.1 4,128,763 - Psyr_3464 0.74 -1.7 4,128,763 - Psyr_3464 0.74 -1.8 4,128,763 - Psyr_3464 0.74 -2.7 4,128,763 - Psyr_3464 0.74 -2.3 4,128,891 + Psyr_3464 0.83 -0.8 4,128,891 + Psyr_3464 0.83 +0.0 4,128,891 + Psyr_3464 0.83 +1.0 4,128,892 - Psyr_3464 0.83 +0.0 4,128,892 - Psyr_3464 0.83 -0.8 4,128,892 - Psyr_3464 0.83 -0.6 4,128,892 - Psyr_3464 0.83 +0.0 4,128,892 - Psyr_3464 0.83 -1.4 4,128,900 + Psyr_3464 0.83 -2.8 4,128,900 + Psyr_3464 0.83 +0.0 4,128,901 - Psyr_3464 0.83 -2.0 4,128,901 - Psyr_3464 0.83 -1.0 4,129,111 - +5.1 4,129,119 + -1.5 4,129,119 + -2.3 4,129,119 + -1.0 4,129,119 + -3.8 4,129,119 + -0.0 4,129,119 + +2.6 4,129,120 - +1.6 4,129,120 - -3.1 4,129,120 - +3.3 4,129,120 - -0.9 4,129,120 - -0.0 4,129,120 - -4.5 4,129,125 + -0.0 4,129,125 + +2.3 4,129,125 + +2.8 4,129,126 - +1.6 4,129,126 - -0.0 4,129,126 - -6.2 4,129,126 - -2.5 4,129,126 - -0.9 4,129,308 + Psyr_3465 0.21 -5.3 4,129,308 + Psyr_3465 0.21 -0.7 4,129,308 + Psyr_3465 0.21 +2.6 4,129,308 + Psyr_3465 0.21 -2.5 4,129,309 - Psyr_3465 0.22 +2.3 4,129,311 + Psyr_3465 0.22 +2.3 4,129,311 + Psyr_3465 0.22 -3.7 4,129,311 + Psyr_3465 0.22 -1.4 4,129,311 + Psyr_3465 0.22 -2.0 4,129,312 - Psyr_3465 0.22 -2.4 4,129,312 - Psyr_3465 0.22 -0.0 4,129,312 - Psyr_3465 0.22 -3.0 4,129,312 - Psyr_3465 0.22 +1.6 4,129,439 + Psyr_3465 0.55 +0.6 4,129,439 + Psyr_3465 0.55 +1.0 4,129,482 - Psyr_3465 0.66 -0.9 4,129,482 - Psyr_3465 0.66 -0.0 4,129,482 - Psyr_3465 0.66 +1.0 4,129,482 - Psyr_3465 0.66 +2.0 4,129,611 - -0.0 4,129,657 + -2.3 4,129,657 + -3.3 4,129,658 - -3.3 4,129,658 - -4.4 4,129,658 - +2.3 4,129,690 + -2.3 4,129,691 - -3.4 4,130,150 + Psyr_3466 0.54 -0.8 4,130,151 - Psyr_3466 0.54 -1.3 4,130,264 + +0.0 4,130,264 + +0.0 4,130,324 + +0.0 4,130,325 - Psyr_3466 0.75 -4.2 4,130,326 - Psyr_3466 0.75 +0.0 4,130,384 + Psyr_3466 0.82 -3.6 4,130,511 + +0.0 4,130,511 + +2.0 4,130,511 + -2.6 4,130,511 + +0.0 4,130,524 - +0.0 4,130,562 - +3.6 4,130,564 + +1.6 4,130,564 + -2.2 4,130,564 + +1.0 4,130,564 + -2.1 4,130,565 - +2.3 4,130,565 - +2.6 4,130,565 - +3.6 4,130,565 - +4.2 4,130,602 - +4.0 4,130,615 - -2.5 4,130,617 + -3.6 4,130,617 + -0.2 4,130,617 + +0.0 4,130,618 - +2.0 4,130,618 - -1.4 4,130,618 - +3.8 4,130,689 + -1.4 4,130,689 + -1.4 4,130,797 + +1.6 4,130,797 + -1.4 4,130,797 + -0.6 4,130,797 + +0.0 4,130,798 - -1.6 4,130,805 + -1.3 4,130,805 + +1.2 4,130,806 - -2.8 4,130,810 - -4.8 4,130,810 - +0.0 4,130,814 + +3.6 4,130,875 - -1.0 4,130,875 - +2.6 4,130,876 + +0.0 4,130,877 - +1.6
Or see this region's nucleotide sequence