Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3459

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
4,121,506	+		Psyr_3457	0.80	+0.3
4,121,532	+		Psyr_3457	0.81	-1.6
4,121,594	+		Psyr_3457	0.85	+2.0
4,121,594	+		Psyr_3457	0.85	+3.2
4,121,594	+		Psyr_3457	0.85	+2.8
4,121,595	-		Psyr_3457	0.85	+2.0
4,121,595	-		Psyr_3457	0.85	+1.2
4,121,595	-		Psyr_3457	0.85	-0.3
4,121,793	+				-1.0
4,121,842	-				-0.0
4,121,870	+				-5.1
4,121,870	+				+1.6
4,121,870	+				-0.6
4,121,870	+				+0.1
4,121,870	+				-1.6
4,121,870	+				-0.0
4,121,871	-				-3.7
4,121,871	-				+4.1
4,121,926	-		Psyr_3458	0.14	+2.6
4,121,926	-		Psyr_3458	0.14	-0.8
4,122,187	-				-0.8
4,122,213	+				-4.1
4,122,213	+				-4.4
4,122,213	+				+2.6
4,122,213	+				-0.0
4,122,213	+				-1.6
4,122,213	+				-1.0
4,122,213	+				+2.0
4,122,213	+				-4.1
4,122,213	+				-3.7
4,122,213	+				+3.2
4,122,213	+				-3.2
4,122,213	+				-2.3
4,122,213	+				-3.7
4,122,213	+				-4.9
4,122,214	-				+0.5
4,122,214	-				-2.4
4,122,214	-				+3.7
4,122,214	-				-2.1
4,122,214	-				-1.0
4,122,214	-				-0.2
4,122,214	-				-0.8
4,122,214	-				+2.6
4,122,214	-				-0.5
4,122,214	-				+3.3
4,122,266	+				+2.8
4,122,267	-				+3.0
4,122,268	+				+1.0
4,122,268	+				-1.5
4,122,269	-				+1.0
4,122,392	+				+3.4
4,122,392	+				+3.4
4,122,392	+				-2.1
4,122,392	+				+2.6
4,122,393	-				+1.6
4,122,406	+				-3.4
4,122,407	-				+2.8
4,122,521	+				+4.3
4,122,521	+				+3.9
4,122,522	-				+1.0
4,122,902	+		Psyr_3459	0.32	-2.4
4,122,903	-		Psyr_3459	0.32	-2.3
4,122,903	-		Psyr_3459	0.32	+3.3
4,122,903	-		Psyr_3459	0.32	-3.4
4,123,319	+		Psyr_3459	0.61	-1.6
4,123,778	+				-3.7
4,123,778	+				-1.1
4,123,779	-				-0.0
4,123,779	-				-0.2
4,123,779	-				+0.1
4,123,780	+				+2.6
4,123,780	+				+2.8
4,123,780	+				-3.1
4,123,780	+				-0.2
4,123,780	+				+4.2
4,123,781	-				+0.4
4,123,781	-				+1.1
4,123,781	-				-0.0
4,123,781	-				+1.0
4,123,781	-				-0.5
4,123,781	-				-2.3
4,123,781	-				-0.3
4,123,781	-				-1.9
4,123,781	-				+2.6
4,123,870	+				-2.9
4,123,870	+				+2.3
4,123,870	+				+2.6
4,123,870	+				-1.4
4,123,871	-				+1.6
4,123,871	-				-1.1
4,123,874	-				+3.2
4,123,874	-				+3.0
4,123,874	-				+3.0
4,123,947	+				+4.1
4,123,947	+				-4.6
4,123,947	+				+0.5
4,123,947	+				+2.0
4,123,948	-				-0.2
4,123,948	-				-1.6
4,123,948	-				-1.3
4,124,118	+		Psyr_3460	0.21	-1.0
4,124,119	-		Psyr_3460	0.21	+2.3
4,124,463	+		Psyr_3460	0.49	+3.2
4,124,463	+		Psyr_3460	0.49	-0.2
4,124,488	+		Psyr_3460	0.51	-2.4
4,124,518	+		Psyr_3460	0.54	+0.1
4,124,597	+		Psyr_3460	0.60	-2.2
4,124,598	-		Psyr_3460	0.60	-0.2
4,124,759	-		Psyr_3460	0.74	+2.8