Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3441 and Psyr_3442 are separated by 0 nucleotides Psyr_3442 and Psyr_3443 are separated by 6 nucleotides Psyr_3443 and Psyr_3444 are separated by 25 nucleotides
Psyr_3441: Psyr_3441 - Flagellar biosynthetic protein FlhB, at 4,106,062 to 4,107,198
_3441
Psyr_3442: Psyr_3442 - Flagellar biosynthesis protein FliR, at 4,107,199 to 4,107,984
_3442
Psyr_3443: Psyr_3443 - Flagellar biosynthesis protein FliQ, at 4,107,991 to 4,108,260
_3443
Psyr_3444: Psyr_3444 - Flagellar transport protein FliP, at 4,108,286 to 4,109,038
_3444
Position (kb) 4107
4108 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2
3
4 at 4106.225 kb on + strand, within Psyr_3441 at 4106.225 kb on + strand, within Psyr_3441 at 4106.225 kb on + strand, within Psyr_3441 at 4106.225 kb on + strand, within Psyr_3441 at 4106.226 kb on - strand, within Psyr_3441 at 4106.226 kb on - strand, within Psyr_3441 at 4106.228 kb on + strand, within Psyr_3441 at 4106.228 kb on + strand, within Psyr_3441 at 4106.228 kb on + strand, within Psyr_3441 at 4106.228 kb on + strand, within Psyr_3441 at 4106.228 kb on + strand, within Psyr_3441 at 4106.228 kb on + strand, within Psyr_3441 at 4106.228 kb on + strand, within Psyr_3441 at 4106.229 kb on - strand, within Psyr_3441 at 4106.229 kb on - strand, within Psyr_3441 at 4106.229 kb on - strand, within Psyr_3441 at 4106.229 kb on - strand, within Psyr_3441 at 4106.229 kb on - strand, within Psyr_3441 at 4106.232 kb on + strand, within Psyr_3441 at 4106.232 kb on + strand, within Psyr_3441 at 4106.233 kb on - strand, within Psyr_3441 at 4106.233 kb on - strand, within Psyr_3441 at 4106.233 kb on - strand, within Psyr_3441 at 4106.233 kb on - strand, within Psyr_3441 at 4106.360 kb on + strand, within Psyr_3441 at 4106.361 kb on - strand, within Psyr_3441 at 4106.361 kb on - strand, within Psyr_3441 at 4106.466 kb on + strand, within Psyr_3441 at 4106.466 kb on + strand, within Psyr_3441 at 4106.466 kb on + strand, within Psyr_3441 at 4106.467 kb on - strand, within Psyr_3441 at 4106.467 kb on - strand, within Psyr_3441 at 4106.467 kb on - strand, within Psyr_3441 at 4106.467 kb on - strand, within Psyr_3441 at 4106.467 kb on - strand, within Psyr_3441 at 4106.467 kb on - strand, within Psyr_3441 at 4106.467 kb on - strand, within Psyr_3441 at 4106.555 kb on + strand, within Psyr_3441 at 4106.555 kb on + strand, within Psyr_3441 at 4106.555 kb on + strand, within Psyr_3441 at 4106.555 kb on + strand, within Psyr_3441 at 4106.555 kb on + strand, within Psyr_3441 at 4106.555 kb on + strand, within Psyr_3441 at 4106.556 kb on - strand, within Psyr_3441 at 4106.556 kb on - strand, within Psyr_3441 at 4106.556 kb on - strand, within Psyr_3441 at 4106.556 kb on - strand, within Psyr_3441 at 4106.556 kb on - strand, within Psyr_3441 at 4106.556 kb on - strand, within Psyr_3441 at 4106.591 kb on - strand, within Psyr_3441 at 4106.591 kb on - strand, within Psyr_3441 at 4106.966 kb on + strand, within Psyr_3441 at 4106.966 kb on + strand, within Psyr_3441 at 4106.966 kb on + strand, within Psyr_3441 at 4106.966 kb on + strand, within Psyr_3441 at 4106.966 kb on + strand, within Psyr_3441 at 4106.966 kb on + strand, within Psyr_3441 at 4106.966 kb on + strand, within Psyr_3441 at 4106.966 kb on + strand, within Psyr_3441 at 4106.967 kb on - strand, within Psyr_3441 at 4106.967 kb on - strand, within Psyr_3441 at 4106.967 kb on - strand, within Psyr_3441 at 4107.258 kb on - strand at 4107.316 kb on - strand, within Psyr_3442 at 4107.316 kb on - strand, within Psyr_3442 at 4107.316 kb on - strand, within Psyr_3442 at 4107.415 kb on + strand, within Psyr_3442 at 4107.474 kb on + strand, within Psyr_3442 at 4107.624 kb on + strand, within Psyr_3442 at 4107.693 kb on + strand, within Psyr_3442 at 4107.842 kb on + strand, within Psyr_3442 at 4107.842 kb on + strand, within Psyr_3442 at 4107.842 kb on + strand, within Psyr_3442 at 4107.843 kb on - strand, within Psyr_3442 at 4107.843 kb on - strand, within Psyr_3442 at 4107.843 kb on - strand, within Psyr_3442 at 4107.843 kb on - strand, within Psyr_3442 at 4108.012 kb on - strand at 4108.012 kb on - strand at 4108.019 kb on + strand, within Psyr_3443 at 4108.020 kb on - strand, within Psyr_3443 at 4108.034 kb on + strand, within Psyr_3443 at 4108.034 kb on + strand, within Psyr_3443 at 4108.034 kb on + strand, within Psyr_3443 at 4108.034 kb on + strand, within Psyr_3443 at 4108.034 kb on + strand, within Psyr_3443 at 4108.034 kb on + strand, within Psyr_3443 at 4108.034 kb on + strand, within Psyr_3443 at 4108.034 kb on + strand, within Psyr_3443 at 4108.035 kb on - strand, within Psyr_3443 at 4108.035 kb on - strand, within Psyr_3443 at 4108.035 kb on - strand, within Psyr_3443 at 4108.035 kb on - strand, within Psyr_3443 at 4108.045 kb on + strand, within Psyr_3443 at 4108.046 kb on - strand, within Psyr_3443 at 4108.046 kb on - strand, within Psyr_3443 at 4108.246 kb on + strand at 4108.289 kb on + strand at 4108.289 kb on + strand at 4108.290 kb on - strand at 4108.290 kb on - strand at 4108.522 kb on + strand, within Psyr_3444
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 4,106,225 + Psyr_3441 0.14 -3.2 4,106,225 + Psyr_3441 0.14 -1.2 4,106,225 + Psyr_3441 0.14 -3.1 4,106,225 + Psyr_3441 0.14 +3.0 4,106,226 - Psyr_3441 0.14 +3.8 4,106,226 - Psyr_3441 0.14 -0.7 4,106,228 + Psyr_3441 0.15 -1.0 4,106,228 + Psyr_3441 0.15 -3.1 4,106,228 + Psyr_3441 0.15 -0.2 4,106,228 + Psyr_3441 0.15 +4.3 4,106,228 + Psyr_3441 0.15 +2.0 4,106,228 + Psyr_3441 0.15 +4.1 4,106,228 + Psyr_3441 0.15 -0.3 4,106,229 - Psyr_3441 0.15 +0.5 4,106,229 - Psyr_3441 0.15 -0.8 4,106,229 - Psyr_3441 0.15 +3.2 4,106,229 - Psyr_3441 0.15 -0.3 4,106,229 - Psyr_3441 0.15 +0.3 4,106,232 + Psyr_3441 0.15 -1.0 4,106,232 + Psyr_3441 0.15 +2.3 4,106,233 - Psyr_3441 0.15 +3.0 4,106,233 - Psyr_3441 0.15 +2.0 4,106,233 - Psyr_3441 0.15 -0.2 4,106,233 - Psyr_3441 0.15 +3.2 4,106,360 + Psyr_3441 0.26 +2.8 4,106,361 - Psyr_3441 0.26 +4.6 4,106,361 - Psyr_3441 0.26 +1.3 4,106,466 + Psyr_3441 0.36 +3.8 4,106,466 + Psyr_3441 0.36 -4.7 4,106,466 + Psyr_3441 0.36 +2.3 4,106,467 - Psyr_3441 0.36 -1.4 4,106,467 - Psyr_3441 0.36 +2.0 4,106,467 - Psyr_3441 0.36 +3.9 4,106,467 - Psyr_3441 0.36 -2.3 4,106,467 - Psyr_3441 0.36 -0.3 4,106,467 - Psyr_3441 0.36 -1.9 4,106,467 - Psyr_3441 0.36 +4.1 4,106,555 + Psyr_3441 0.43 -2.5 4,106,555 + Psyr_3441 0.43 -1.7 4,106,555 + Psyr_3441 0.43 -2.5 4,106,555 + Psyr_3441 0.43 +3.0 4,106,555 + Psyr_3441 0.43 -2.8 4,106,555 + Psyr_3441 0.43 +0.5 4,106,556 - Psyr_3441 0.43 +4.6 4,106,556 - Psyr_3441 0.43 +2.6 4,106,556 - Psyr_3441 0.43 +0.9 4,106,556 - Psyr_3441 0.43 +1.0 4,106,556 - Psyr_3441 0.43 -0.1 4,106,556 - Psyr_3441 0.43 +3.8 4,106,591 - Psyr_3441 0.47 -0.5 4,106,591 - Psyr_3441 0.47 -0.1 4,106,966 + Psyr_3441 0.80 +2.0 4,106,966 + Psyr_3441 0.80 +1.4 4,106,966 + Psyr_3441 0.80 -0.2 4,106,966 + Psyr_3441 0.80 -2.4 4,106,966 + Psyr_3441 0.80 +1.6 4,106,966 + Psyr_3441 0.80 -0.0 4,106,966 + Psyr_3441 0.80 -2.3 4,106,966 + Psyr_3441 0.80 +3.2 4,106,967 - Psyr_3441 0.80 +1.6 4,106,967 - Psyr_3441 0.80 +2.0 4,106,967 - Psyr_3441 0.80 -2.7 4,107,258 - -3.9 4,107,316 - Psyr_3442 0.15 +0.7 4,107,316 - Psyr_3442 0.15 +3.4 4,107,316 - Psyr_3442 0.15 +1.2 4,107,415 + Psyr_3442 0.27 -3.6 4,107,474 + Psyr_3442 0.35 -0.0 4,107,624 + Psyr_3442 0.54 -1.2 4,107,693 + Psyr_3442 0.63 +2.4 4,107,842 + Psyr_3442 0.82 -2.7 4,107,842 + Psyr_3442 0.82 +3.0 4,107,842 + Psyr_3442 0.82 -2.2 4,107,843 - Psyr_3442 0.82 +2.3 4,107,843 - Psyr_3442 0.82 +0.6 4,107,843 - Psyr_3442 0.82 -1.6 4,107,843 - Psyr_3442 0.82 -0.2 4,108,012 - +0.2 4,108,012 - -2.5 4,108,019 + Psyr_3443 0.10 +3.2 4,108,020 - Psyr_3443 0.11 -1.6 4,108,034 + Psyr_3443 0.16 -1.6 4,108,034 + Psyr_3443 0.16 -3.8 4,108,034 + Psyr_3443 0.16 -2.3 4,108,034 + Psyr_3443 0.16 +4.5 4,108,034 + Psyr_3443 0.16 -3.0 4,108,034 + Psyr_3443 0.16 +1.0 4,108,034 + Psyr_3443 0.16 -0.0 4,108,034 + Psyr_3443 0.16 -3.7 4,108,035 - Psyr_3443 0.16 -0.9 4,108,035 - Psyr_3443 0.16 -0.8 4,108,035 - Psyr_3443 0.16 -2.2 4,108,035 - Psyr_3443 0.16 +1.0 4,108,045 + Psyr_3443 0.20 -1.3 4,108,046 - Psyr_3443 0.20 -0.9 4,108,046 - Psyr_3443 0.20 +0.9 4,108,246 + -5.9 4,108,289 + -1.2 4,108,289 + -1.6 4,108,290 - -1.4 4,108,290 - -0.0 4,108,522 + Psyr_3444 0.31 +1.6
Or see this region's nucleotide sequence