Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3330

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,983,259	+		Psyr_3329	0.59	-1.6
3,983,259	+		Psyr_3329	0.59	-4.3
3,983,430	+		Psyr_3329	0.66	-2.0
3,983,430	+		Psyr_3329	0.66	+0.7
3,983,431	-		Psyr_3329	0.66	-3.3
3,983,431	-		Psyr_3329	0.66	+0.3
3,983,431	-		Psyr_3329	0.66	+3.0
3,983,433	+		Psyr_3329	0.66	+2.6
3,983,433	+		Psyr_3329	0.66	-0.8
3,983,434	-		Psyr_3329	0.66	-4.9
3,983,434	-		Psyr_3329	0.66	+0.1
3,983,434	-		Psyr_3329	0.66	-2.3
3,983,447	-		Psyr_3329	0.67	+0.8
3,983,465	+		Psyr_3329	0.68	-0.3
3,983,486	+		Psyr_3329	0.69	+1.0
3,983,487	-		Psyr_3329	0.69	-1.4
3,983,488	+		Psyr_3329	0.69	-0.0
3,983,488	+		Psyr_3329	0.69	+4.5
3,983,488	+		Psyr_3329	0.69	+4.1
3,983,488	+		Psyr_3329	0.69	+0.5
3,983,488	+		Psyr_3329	0.69	-2.4
3,983,488	+		Psyr_3329	0.69	+3.3
3,983,488	+		Psyr_3329	0.69	+3.0
3,983,488	+		Psyr_3329	0.69	-1.0
3,983,488	+		Psyr_3329	0.69	+1.6
3,983,488	+		Psyr_3329	0.69	+4.7
3,983,489	-		Psyr_3329	0.69	-3.3
3,983,489	-		Psyr_3329	0.69	-2.4
3,983,489	-		Psyr_3329	0.69	+3.3
3,983,489	-		Psyr_3329	0.69	-1.2
3,983,489	-		Psyr_3329	0.69	+2.0
3,983,489	-		Psyr_3329	0.69	-1.0
3,983,585	-		Psyr_3329	0.73	-2.9
3,984,019	+				-0.8
3,984,019	+				-0.0
3,984,019	+				+3.0
3,984,019	+				-4.0
3,984,019	+				-0.0
3,984,020	-				-0.0
3,984,054	+				+3.1
3,984,054	+				+2.3
3,984,054	+				+1.0
3,984,054	+				-2.5
3,984,054	+				-0.0
3,984,054	+				+3.4
3,984,054	+				-3.5
3,984,055	-				-1.8
3,984,055	-				-2.9
3,984,055	-				-3.4
3,984,055	-				+3.9
3,984,055	-				-3.5
3,984,055	-				+1.6
3,984,055	-				-0.8
3,984,078	+				-2.4
3,984,079	-				-1.6
3,984,079	-				-4.1
3,984,084	+				-1.1
3,984,084	+				+3.3
3,984,085	-				+1.6
3,984,123	+				+2.6
3,984,123	+				-0.2
3,984,123	+				+3.1
3,984,124	-				+2.0
3,984,124	-				-1.6
3,984,125	+				-2.8
3,984,125	+				-0.5
3,984,125	+				-1.3
3,984,125	+				-2.0
3,984,126	-				-2.4
3,984,126	-				+3.1
3,984,126	-				-2.1
3,984,126	-				-0.0
3,984,126	-				-0.9
3,984,246	+				-2.0
3,984,246	+				-0.7
3,984,246	+				-1.8
3,984,376	-		Psyr_3330	0.13	+3.1
3,984,493	+		Psyr_3330	0.24	+2.8
3,984,494	-		Psyr_3330	0.24	+1.6
3,984,496	+		Psyr_3330	0.25	-1.3
3,984,496	+		Psyr_3330	0.25	-2.6
3,984,496	+		Psyr_3330	0.25	+3.3
3,984,496	+		Psyr_3330	0.25	-2.6
3,984,496	+		Psyr_3330	0.25	-0.7
3,984,497	-		Psyr_3330	0.25	+0.3
3,984,497	-		Psyr_3330	0.25	-0.4
3,984,582	+		Psyr_3330	0.33	+2.0
3,984,582	+		Psyr_3330	0.33	-0.4
3,984,582	+		Psyr_3330	0.33	+3.6
3,984,582	+		Psyr_3330	0.33	+1.1
3,984,582	+		Psyr_3330	0.33	-3.4
3,984,583	-		Psyr_3330	0.33	-0.0
3,984,583	-		Psyr_3330	0.33	-0.0
3,984,718	+		Psyr_3330	0.45	-5.5
3,984,718	+		Psyr_3330	0.45	-4.1
3,984,719	-		Psyr_3330	0.45	+2.0
3,984,739	+		Psyr_3330	0.47	-0.4
3,984,740	-		Psyr_3330	0.47	-2.1
3,984,773	-		Psyr_3330	0.50	+2.3
3,984,787	+		Psyr_3330	0.52	-0.9
3,984,896	-		Psyr_3330	0.62	-3.0
3,984,896	-		Psyr_3330	0.62	+1.0
3,984,896	-		Psyr_3330	0.62	-4.0
3,985,102	+		Psyr_3330	0.81	-0.8
3,985,102	+		Psyr_3330	0.81	-4.6
3,985,102	+		Psyr_3330	0.81	-2.0
3,985,102	+		Psyr_3330	0.81	+2.8
3,985,102	+		Psyr_3330	0.81	-1.6
3,985,103	-		Psyr_3330	0.81	+2.6
3,985,115	+		Psyr_3330	0.82	-1.3
3,985,159	+		Psyr_3330	0.86	+2.3
3,985,232	+				-3.2
3,985,233	-				+1.6
3,985,452	-				+0.2
3,985,577	+				+2.0
3,985,577	+				-0.0
3,985,578	-				-0.8
3,985,595	+				+0.7
3,985,595	+				-2.7
3,985,596	-				-1.0
3,985,596	-				-2.8
3,985,639	+				+2.5
3,985,639	+				-3.7
3,985,639	+				-1.6
3,985,639	+				+3.1
3,985,639	+				-4.1
3,985,640	-				-0.0
3,985,640	-				+0.5
3,985,640	-				+2.8
3,985,640	-				-2.5
3,985,643	+				-0.6
3,985,643	+				+4.4
3,985,643	+				+1.5
3,985,703	+				+3.4
3,985,703	+				-1.3
3,985,704	-				-2.3
3,985,704	-				-1.2
3,985,704	-				+2.0
3,985,725	-				-1.2
3,985,874	-				+3.0
3,986,170	+		Psyr_3331	0.28	+2.3
3,986,171	-		Psyr_3331	0.28	-1.9
3,986,171	-		Psyr_3331	0.28	+2.8
3,986,171	-		Psyr_3331	0.28	+2.3
3,986,173	+		Psyr_3331	0.29	-0.3
3,986,258	-		Psyr_3331	0.34	+3.4