Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3278

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,925,251	+		Psyr_3277	0.32	-0.7
3,925,251	+		Psyr_3277	0.32	-0.6
3,925,252	-		Psyr_3277	0.32	-0.8
3,925,252	-		Psyr_3277	0.32	+2.9
3,925,284	+		Psyr_3277	0.35	-0.7
3,925,284	+		Psyr_3277	0.35	+3.1
3,925,285	-		Psyr_3277	0.35	-0.1
3,925,285	-		Psyr_3277	0.35	+1.9
3,925,285	-		Psyr_3277	0.35	-0.1
3,925,285	-		Psyr_3277	0.35	-0.5
3,925,285	-		Psyr_3277	0.35	-1.4
3,925,290	+		Psyr_3277	0.35	-1.9
3,925,290	+		Psyr_3277	0.35	-0.1
3,925,291	-		Psyr_3277	0.35	+3.2
3,925,291	-		Psyr_3277	0.35	-3.8
3,925,291	-		Psyr_3277	0.35	-2.0
3,925,291	-		Psyr_3277	0.35	-2.3
3,925,291	-		Psyr_3277	0.35	+2.5
3,925,291	-		Psyr_3277	0.35	-3.3
3,925,445	-		Psyr_3277	0.48	+2.2
3,925,445	-		Psyr_3277	0.48	-0.1
3,925,595	-		Psyr_3277	0.60	-1.9
3,925,684	+		Psyr_3277	0.67	-3.1
3,925,685	-		Psyr_3277	0.67	-2.0
3,925,698	+		Psyr_3277	0.68	+1.9
3,925,698	+		Psyr_3277	0.68	-1.0
3,925,698	+		Psyr_3277	0.68	-0.8
3,925,698	+		Psyr_3277	0.68	+1.5
3,925,699	-		Psyr_3277	0.68	+0.4
3,925,699	-		Psyr_3277	0.68	-0.1
3,925,699	-		Psyr_3277	0.68	+0.8
3,925,747	+		Psyr_3277	0.72	-1.0
3,925,876	-		Psyr_3277	0.82	+2.2
3,926,006	+				+3.6
3,926,006	+				+0.9
3,926,006	+				+0.0
3,926,006	+				-3.3
3,926,006	+				+1.9
3,926,007	-				+2.5
3,926,007	-				-2.5
3,926,007	-				+1.9
3,926,007	-				-0.1
3,926,007	-				+0.9
3,926,028	+				+1.2
3,926,057	+				-1.5
3,926,058	-				-5.2
3,926,089	+				-0.8
3,926,090	-				+1.9
3,926,098	+				-0.9
3,926,099	-				-6.2
3,926,099	-				-4.3
3,926,099	-				+0.2
3,926,195	+		Psyr_3278	0.13	-1.3
3,926,195	+		Psyr_3278	0.13	+1.9
3,926,195	+		Psyr_3278	0.13	+3.2
3,926,195	+		Psyr_3278	0.13	+1.7
3,926,195	+		Psyr_3278	0.13	+2.9
3,926,195	+		Psyr_3278	0.13	-1.7
3,926,195	+		Psyr_3278	0.13	-1.3
3,926,196	-		Psyr_3278	0.13	+2.5
3,926,196	-		Psyr_3278	0.13	+2.2
3,926,196	-		Psyr_3278	0.13	-0.1
3,926,196	-		Psyr_3278	0.13	+3.6
3,926,196	-		Psyr_3278	0.13	-0.5
3,926,364	+		Psyr_3278	0.34	+3.2
3,926,383	-		Psyr_3278	0.37	-4.7
3,926,446	+		Psyr_3278	0.45	-1.9
3,926,446	+		Psyr_3278	0.45	-2.6
3,926,546	+		Psyr_3278	0.57	+1.5
3,926,732	-		Psyr_3278	0.81	-0.1
3,926,815	+				-0.9
3,926,816	-				+3.7
3,926,816	-				-3.2
3,926,816	-				+1.9
3,926,910	+				-2.3
3,926,911	-				-1.6
3,926,911	-				-3.7
3,926,960	+				+3.1
3,926,960	+				+1.5
3,926,960	+				+3.2
3,926,961	-				-0.1
3,926,961	-				-0.1
3,926,961	-				-0.1
3,926,970	-				-0.1
3,927,038	+				-3.1
3,927,038	+				+0.9
3,927,038	+				-2.5
3,927,039	-				-0.1
3,927,092	+				+0.7
3,927,092	+				-1.1
3,927,093	-				-5.1
3,927,093	-				-3.5
3,927,093	-				+1.9
3,927,166	+		Psyr_3279	0.15	-1.3
3,927,398	+		Psyr_3279	0.58	-1.8
3,927,541	+		Psyr_3279	0.84	+3.9
3,927,541	+		Psyr_3279	0.84	-0.8
3,927,541	+		Psyr_3279	0.84	+2.7
3,927,541	+		Psyr_3279	0.84	-4.0
3,927,542	-		Psyr_3279	0.85	+1.9
3,927,542	-		Psyr_3279	0.85	+1.9
3,927,542	-		Psyr_3279	0.85	-1.3
3,927,542	-		Psyr_3279	0.85	-0.1
3,927,542	-		Psyr_3279	0.85	-0.1
3,927,542	-		Psyr_3279	0.85	+1.5
3,927,542	-		Psyr_3279	0.85	-2.4
3,927,544	+		Psyr_3279	0.85	-0.2
3,927,544	+		Psyr_3279	0.85	-0.1
3,927,544	+		Psyr_3279	0.85	-2.5
3,927,544	+		Psyr_3279	0.85	+2.5
3,927,544	+		Psyr_3279	0.85	-0.7
3,927,544	+		Psyr_3279	0.85	+0.9
3,927,544	+		Psyr_3279	0.85	+2.9
3,927,544	+		Psyr_3279	0.85	+1.9
3,927,545	-		Psyr_3279	0.85	-0.6
3,927,545	-		Psyr_3279	0.85	-4.3
3,927,545	-		Psyr_3279	0.85	+2.5
3,927,545	-		Psyr_3279	0.85	+3.9
3,927,545	-		Psyr_3279	0.85	+2.2
3,927,545	-		Psyr_3279	0.85	-1.9
3,927,545	-		Psyr_3279	0.85	-0.7
3,927,545	-		Psyr_3279	0.85	-2.5
3,927,545	-		Psyr_3279	0.85	-0.7
3,927,545	-		Psyr_3279	0.85	+1.9
3,927,622	+				+1.9
3,927,622	+				+2.7
3,927,623	-				+1.1
3,927,623	-				-0.1
3,927,623	-				-0.1
3,927,766	-		Psyr_3280	0.19	+2.7