Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3276

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,922,932	+				-0.1
3,923,065	+		Psyr_3275	0.10	-1.7
3,923,065	+		Psyr_3275	0.10	-0.1
3,923,065	+		Psyr_3275	0.10	+1.5
3,923,065	+		Psyr_3275	0.10	-4.3
3,923,065	+		Psyr_3275	0.10	+0.4
3,923,065	+		Psyr_3275	0.10	+1.5
3,923,065	+		Psyr_3275	0.10	+0.4
3,923,065	+		Psyr_3275	0.10	-4.3
3,923,065	+		Psyr_3275	0.10	+0.9
3,923,065	+		Psyr_3275	0.10	-4.5
3,923,065	+		Psyr_3275	0.10	-0.1
3,923,065	+		Psyr_3275	0.10	-0.1
3,923,066	-				-0.1
3,923,066	-		Psyr_3275	0.10	-0.1
3,923,066	-		Psyr_3275	0.10	+1.9
3,923,066	-		Psyr_3275	0.10	-2.0
3,923,066	-		Psyr_3275	0.10	-4.1
3,923,066	-		Psyr_3275	0.10	-0.1
3,923,067	+		Psyr_3275	0.10	-1.5
3,923,067	+		Psyr_3275	0.10	-1.4
3,923,067	+		Psyr_3275	0.10	-0.1
3,923,068	-		Psyr_3275	0.10	-4.0
3,923,068	-		Psyr_3275	0.10	-1.4
3,923,068	-		Psyr_3275	0.10	-2.5
3,923,068	-		Psyr_3275	0.10	-3.3
3,923,068	-		Psyr_3275	0.10	-4.3
3,923,215	+		Psyr_3275	0.27	+3.5
3,923,216	-		Psyr_3275	0.28	-0.1
3,923,216	-		Psyr_3275	0.28	+2.5
3,923,218	-		Psyr_3275	0.28	-0.1
3,923,245	+				-1.0
3,923,245	+		Psyr_3275	0.31	-1.0
3,923,277	+		Psyr_3275	0.35	+2.9
3,923,419	+		Psyr_3275	0.51	+0.9
3,923,419	+		Psyr_3275	0.51	-3.5
3,923,419	+				-1.3
3,923,419	+		Psyr_3275	0.51	-2.3
3,923,419	+		Psyr_3275	0.51	-0.9
3,923,419	+		Psyr_3275	0.51	-0.4
3,923,419	+		Psyr_3275	0.51	-0.1
3,923,419	+		Psyr_3275	0.51	+1.5
3,923,419	+		Psyr_3275	0.51	-0.1
3,923,419	+		Psyr_3275	0.51	+3.2
3,923,419	+		Psyr_3275	0.51	+1.5
3,923,419	+		Psyr_3275	0.51	+3.8
3,923,419	+		Psyr_3275	0.51	-1.9
3,923,420	-		Psyr_3275	0.51	-0.5
3,923,420	-		Psyr_3275	0.51	-0.1
3,923,420	-		Psyr_3275	0.51	+0.9
3,923,420	-		Psyr_3275	0.51	-0.8
3,923,420	-		Psyr_3275	0.51	-2.5
3,923,420	-		Psyr_3275	0.51	-0.1
3,923,420	-		Psyr_3275	0.51	-1.1
3,923,420	-		Psyr_3275	0.51	-1.1
3,923,420	-		Psyr_3275	0.51	-0.9
3,923,420	-		Psyr_3275	0.51	-1.9
3,923,420	-		Psyr_3275	0.51	-0.1
3,923,420	-		Psyr_3275	0.51	+1.5
3,923,420	-		Psyr_3275	0.51	-0.5
3,923,420	-		Psyr_3275	0.51	-0.1
3,923,459	-		Psyr_3275	0.56	-4.4
3,923,459	-		Psyr_3275	0.56	+0.9
3,923,813	+				-2.4
3,923,813	+				-1.6
3,923,929	+				-0.1
3,923,929	+				-2.9
3,923,930	-				-4.3
3,923,930	-				+3.6
3,923,930	-				-3.3
3,923,930	-				-0.7
3,923,965	+		Psyr_3276	0.11	-1.8
3,923,965	+		Psyr_3276	0.11	+1.5
3,923,966	-		Psyr_3276	0.11	-0.1
3,924,071	+		Psyr_3276	0.22	-0.2
3,924,072	-		Psyr_3276	0.22	-2.9
3,924,072	-		Psyr_3276	0.22	+0.5
3,924,155	-		Psyr_3276	0.30	-2.8
3,924,292	+		Psyr_3276	0.44	-0.5
3,924,293	-		Psyr_3276	0.44	-1.1
3,924,410	+		Psyr_3276	0.56	+0.9
3,924,410	+		Psyr_3276	0.56	+2.5
3,924,410	+		Psyr_3276	0.56	+3.5
3,924,410	+		Psyr_3276	0.56	+3.1
3,924,412	+		Psyr_3276	0.56	+1.5
3,924,412	+		Psyr_3276	0.56	+4.2
3,924,412	+		Psyr_3276	0.56	-0.1
3,924,412	+		Psyr_3276	0.56	-2.7
3,924,413	-		Psyr_3276	0.56	-2.3
3,924,413	-		Psyr_3276	0.56	+2.2
3,924,413	-		Psyr_3276	0.56	-0.4
3,924,413	-		Psyr_3276	0.56	+1.5
3,924,487	+		Psyr_3276	0.63	-4.2
3,924,487	+		Psyr_3276	0.63	-1.2
3,924,601	+		Psyr_3276	0.75	+2.2
3,924,602	-		Psyr_3276	0.75	-0.8
3,924,602	-		Psyr_3276	0.75	-4.7
3,924,602	-		Psyr_3276	0.75	-1.7
3,924,631	+		Psyr_3276	0.78	-2.8
3,924,631	+		Psyr_3276	0.78	-3.8
3,924,632	-		Psyr_3276	0.78	+0.8
3,924,632	-		Psyr_3276	0.78	-4.5
3,924,641	-		Psyr_3276	0.79	-3.1
3,924,688	+		Psyr_3276	0.84	-1.5
3,924,688	+		Psyr_3276	0.84	-0.4
3,924,689	-		Psyr_3276	0.84	+2.9
3,924,689	-		Psyr_3276	0.84	-0.1
3,924,740	+		Psyr_3276	0.89	-0.1
3,924,741	-		Psyr_3276	0.89	+0.2
3,924,851	+				-0.1
3,924,852	-				+1.9
3,924,917	+				+1.5
3,924,917	+				+2.2
3,924,917	+				-2.0
3,924,917	+				-0.1
3,924,917	+				-3.2
3,924,917	+				+2.5
3,924,917	+				-2.3
3,924,917	+				-0.1
3,924,918	-				+4.2
3,925,251	+		Psyr_3277	0.32	-0.7
3,925,251	+		Psyr_3277	0.32	-0.6
3,925,252	-		Psyr_3277	0.32	-0.8
3,925,252	-		Psyr_3277	0.32	+2.9
3,925,284	+		Psyr_3277	0.35	-0.7
3,925,284	+		Psyr_3277	0.35	+3.1
3,925,285	-		Psyr_3277	0.35	-0.1
3,925,285	-		Psyr_3277	0.35	+1.9
3,925,285	-		Psyr_3277	0.35	-0.1
3,925,285	-		Psyr_3277	0.35	-0.5
3,925,285	-		Psyr_3277	0.35	-1.4
3,925,290	+		Psyr_3277	0.35	-1.9
3,925,290	+		Psyr_3277	0.35	-0.1
3,925,291	-		Psyr_3277	0.35	+3.2
3,925,291	-		Psyr_3277	0.35	-3.8
3,925,291	-		Psyr_3277	0.35	-2.0
3,925,291	-		Psyr_3277	0.35	-2.3
3,925,291	-		Psyr_3277	0.35	+2.5
3,925,291	-		Psyr_3277	0.35	-3.3
3,925,445	-		Psyr_3277	0.48	+2.2
3,925,445	-		Psyr_3277	0.48	-0.1
3,925,595	-		Psyr_3277	0.60	-1.9
3,925,684	+		Psyr_3277	0.67	-3.1
3,925,685	-		Psyr_3277	0.67	-2.0
3,925,698	+		Psyr_3277	0.68	+1.9
3,925,698	+		Psyr_3277	0.68	-1.0
3,925,698	+		Psyr_3277	0.68	-0.8
3,925,698	+		Psyr_3277	0.68	+1.5
3,925,699	-		Psyr_3277	0.68	+0.4
3,925,699	-		Psyr_3277	0.68	-0.1
3,925,699	-		Psyr_3277	0.68	+0.8
3,925,747	+		Psyr_3277	0.72	-1.0