Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3119

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,738,404	-		Psyr_3118	0.44	+2.4
3,738,639	+		Psyr_3118	0.76	-0.2
3,738,640	-		Psyr_3118	0.77	+1.4
3,738,640	-		Psyr_3118	0.77	+2.6
3,738,833	+				-0.2
3,738,833	+				+0.8
3,739,022	+				-3.8
3,739,022	+				-0.2
3,739,022	+				-0.2
3,739,022	+				-3.9
3,739,022	+				-0.2
3,739,023	-				-1.4
3,739,023	-				+2.4
3,739,023	-				+0.3
3,739,023	-				-0.2
3,739,023	-				-1.7
3,739,023	-				+2.7
3,739,023	-				+0.8
3,739,047	-				-0.2
3,739,066	+				-4.7
3,739,067	-				+0.0
3,739,122	+				+2.1
3,739,123	-				-1.5
3,739,123	-				-0.2
3,739,211	-				-3.9
3,739,359	+				+0.8
3,739,359	+				-4.9
3,739,359	+				+2.4
3,739,359	+				-0.2
3,739,359	+				-2.9
3,739,360	-				-0.7
3,739,360	-				+1.8
3,739,360	-				-0.5
3,739,360	-				+1.8
3,739,465	-		Psyr_3119	0.16	-2.4
3,739,517	+		Psyr_3119	0.20	-1.3
3,739,517	+		Psyr_3119	0.20	+0.1
3,739,518	-		Psyr_3119	0.20	+1.8
3,739,518	-		Psyr_3119	0.20	+1.4
3,739,518	-		Psyr_3119	0.20	-0.2
3,739,597	-		Psyr_3119	0.26	-1.2
3,739,597	-		Psyr_3119	0.26	+1.4
3,739,653	+		Psyr_3119	0.30	+1.8
3,739,653	+		Psyr_3119	0.30	-0.2
3,739,653	+		Psyr_3119	0.30	-3.6
3,739,654	-		Psyr_3119	0.30	-1.9
3,739,654	-		Psyr_3119	0.30	+1.8
3,739,654	-		Psyr_3119	0.30	-0.2
3,739,654	-		Psyr_3119	0.30	-2.4
3,739,654	-		Psyr_3119	0.30	-1.8
3,739,656	+		Psyr_3119	0.31	-3.5
3,739,656	+		Psyr_3119	0.31	-0.4
3,739,656	+		Psyr_3119	0.31	+1.4
3,739,656	+		Psyr_3119	0.31	+1.4
3,739,656	+		Psyr_3119	0.31	+0.1
3,739,656	+		Psyr_3119	0.31	+0.8
3,739,657	-		Psyr_3119	0.31	-0.8
3,739,657	-		Psyr_3119	0.31	+2.1
3,739,657	-		Psyr_3119	0.31	-0.8
3,739,657	-		Psyr_3119	0.31	-1.6
3,739,806	+		Psyr_3119	0.42	+1.4
3,739,806	+		Psyr_3119	0.42	-4.2
3,739,806	+		Psyr_3119	0.42	+2.8
3,739,806	+		Psyr_3119	0.42	+2.8
3,739,807	-		Psyr_3119	0.42	-0.2
3,739,807	-		Psyr_3119	0.42	+0.8
3,739,807	-		Psyr_3119	0.42	+2.0
3,739,807	-		Psyr_3119	0.42	-1.7
3,740,025	+		Psyr_3119	0.58	-2.1
3,740,025	+		Psyr_3119	0.58	+3.9
3,740,026	-		Psyr_3119	0.58	-3.3
3,740,026	-		Psyr_3119	0.58	+3.0
3,740,050	-		Psyr_3119	0.60	-0.2
3,740,050	-		Psyr_3119	0.60	-1.6
3,740,160	+		Psyr_3119	0.68	-0.2
3,740,160	+		Psyr_3119	0.68	-4.2
3,740,160	+		Psyr_3119	0.68	-1.2
3,740,160	+		Psyr_3119	0.68	+0.0
3,740,160	+		Psyr_3119	0.68	+2.1
3,740,160	+		Psyr_3119	0.68	+3.4
3,740,160	+		Psyr_3119	0.68	-1.0
3,740,160	+		Psyr_3119	0.68	-1.4
3,740,160	+		Psyr_3119	0.68	+2.1
3,740,160	+		Psyr_3119	0.68	+3.0
3,740,160	+		Psyr_3119	0.68	+3.1
3,740,161	-		Psyr_3119	0.68	-1.2
3,740,161	-		Psyr_3119	0.68	-4.0
3,740,161	-		Psyr_3119	0.68	+1.5
3,740,161	-		Psyr_3119	0.68	+2.6
3,740,161	-		Psyr_3119	0.68	+1.4
3,740,161	-		Psyr_3119	0.68	+2.1
3,740,349	+		Psyr_3119	0.82	-0.9
3,740,350	-		Psyr_3119	0.82	+2.6
3,740,350	-		Psyr_3119	0.82	-2.6
3,740,534	+				-0.7
3,740,624	-				+0.7
3,740,624	-				-0.6
3,740,637	+				-0.2
3,740,637	+				+0.6
3,740,638	-				+0.8
3,740,638	-				+1.8
3,740,638	-				-0.1
3,740,638	-				-0.1
3,740,643	+				-0.9
3,740,643	+				-1.0
3,740,643	+				+2.8
3,740,644	-				-0.5
3,740,644	-				-0.2
3,740,676	+				-0.9
3,740,677	-				+3.3
3,740,774	-				+4.1
3,740,774	-				-0.2
3,740,790	-				+1.4
3,740,790	-				-1.5
3,740,790	-				+3.9
3,740,909	-		Psyr_3120	0.19	+3.6
3,741,127	+		Psyr_3120	0.35	+2.8
3,741,127	+		Psyr_3120	0.35	+1.8
3,741,128	-		Psyr_3120	0.35	-4.3