Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3113 and Psyr_3114 are separated by 125 nucleotides Psyr_3114 and Psyr_3115 are separated by 172 nucleotides
Psyr_3113: Psyr_3113 - N-acylglucosamine 2-epimerase, at 3,730,375 to 3,731,619
_3113
Psyr_3114: Psyr_3114 - methyl-accepting chemotaxis sensory transducer, at 3,731,745 to 3,733,370
_3114
Psyr_3115: Psyr_3115 - Glycerate kinase, at 3,733,543 to 3,734,682
_3115
Position (kb)
3731
3732
3733
3734 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 3730.910 kb on + strand, within Psyr_3113 at 3730.911 kb on - strand, within Psyr_3113 at 3731.267 kb on + strand at 3731.267 kb on + strand, within Psyr_3113 at 3731.267 kb on + strand, within Psyr_3113 at 3731.267 kb on + strand, within Psyr_3113 at 3731.267 kb on + strand, within Psyr_3113 at 3731.268 kb on - strand, within Psyr_3113 at 3731.268 kb on - strand, within Psyr_3113 at 3731.268 kb on - strand, within Psyr_3113 at 3731.394 kb on + strand, within Psyr_3113 at 3731.395 kb on - strand, within Psyr_3113 at 3731.481 kb on - strand, within Psyr_3113 at 3731.481 kb on - strand, within Psyr_3113 at 3731.607 kb on + strand at 3731.607 kb on + strand at 3731.608 kb on - strand at 3731.613 kb on + strand at 3731.613 kb on + strand at 3731.661 kb on + strand at 3731.688 kb on + strand at 3731.689 kb on - strand at 3731.731 kb on - strand at 3731.746 kb on + strand at 3731.746 kb on + strand at 3732.380 kb on + strand, within Psyr_3114 at 3732.666 kb on - strand, within Psyr_3114 at 3732.792 kb on - strand, within Psyr_3114 at 3732.862 kb on + strand, within Psyr_3114 at 3732.862 kb on + strand, within Psyr_3114 at 3732.862 kb on + strand, within Psyr_3114 at 3732.862 kb on + strand, within Psyr_3114 at 3732.863 kb on - strand, within Psyr_3114 at 3732.863 kb on - strand, within Psyr_3114 at 3732.863 kb on - strand, within Psyr_3114 at 3732.863 kb on - strand, within Psyr_3114 at 3732.863 kb on - strand, within Psyr_3114 at 3732.863 kb on - strand, within Psyr_3114 at 3732.863 kb on - strand, within Psyr_3114 at 3733.120 kb on + strand, within Psyr_3114 at 3733.316 kb on + strand at 3733.316 kb on + strand at 3733.316 kb on + strand at 3733.362 kb on + strand at 3733.384 kb on + strand at 3733.386 kb on + strand at 3733.453 kb on - strand at 3733.488 kb on + strand at 3733.488 kb on + strand at 3733.492 kb on + strand at 3733.493 kb on - strand at 3733.682 kb on + strand, within Psyr_3115 at 3733.682 kb on + strand, within Psyr_3115 at 3733.682 kb on + strand, within Psyr_3115 at 3733.682 kb on + strand, within Psyr_3115 at 3733.682 kb on + strand, within Psyr_3115 at 3733.683 kb on - strand, within Psyr_3115 at 3733.683 kb on - strand, within Psyr_3115 at 3733.683 kb on - strand, within Psyr_3115 at 3733.683 kb on - strand, within Psyr_3115 at 3733.683 kb on - strand, within Psyr_3115 at 3733.683 kb on - strand, within Psyr_3115 at 3733.904 kb on + strand, within Psyr_3115
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 3,730,910 + Psyr_3113 0.43 -3.5 3,730,911 - Psyr_3113 0.43 -1.2 3,731,267 + -0.2 3,731,267 + Psyr_3113 0.72 -0.9 3,731,267 + Psyr_3113 0.72 -2.2 3,731,267 + Psyr_3113 0.72 -1.8 3,731,267 + Psyr_3113 0.72 +4.8 3,731,268 - Psyr_3113 0.72 -2.5 3,731,268 - Psyr_3113 0.72 -1.6 3,731,268 - Psyr_3113 0.72 -3.1 3,731,394 + Psyr_3113 0.82 +3.1 3,731,395 - Psyr_3113 0.82 +2.4 3,731,481 - Psyr_3113 0.89 +2.6 3,731,481 - Psyr_3113 0.89 -0.5 3,731,607 + -2.4 3,731,607 + +2.1 3,731,608 - +1.4 3,731,613 + +1.8 3,731,613 + +3.4 3,731,661 + -2.3 3,731,688 + +1.6 3,731,689 - -0.6 3,731,731 - +4.6 3,731,746 + +0.4 3,731,746 + +3.5 3,732,380 + Psyr_3114 0.39 +2.8 3,732,666 - Psyr_3114 0.57 -3.1 3,732,792 - Psyr_3114 0.64 -2.5 3,732,862 + Psyr_3114 0.69 -0.9 3,732,862 + Psyr_3114 0.69 -3.9 3,732,862 + Psyr_3114 0.69 -2.6 3,732,862 + Psyr_3114 0.69 -2.8 3,732,863 - Psyr_3114 0.69 +0.4 3,732,863 - Psyr_3114 0.69 -0.2 3,732,863 - Psyr_3114 0.69 -0.6 3,732,863 - Psyr_3114 0.69 -2.1 3,732,863 - Psyr_3114 0.69 +2.4 3,732,863 - Psyr_3114 0.69 -0.2 3,732,863 - Psyr_3114 0.69 -1.5 3,733,120 + Psyr_3114 0.85 -3.1 3,733,316 + -0.2 3,733,316 + -2.3 3,733,316 + -0.8 3,733,362 + +1.4 3,733,384 + -2.7 3,733,386 + -0.2 3,733,453 - +2.6 3,733,488 + +4.0 3,733,488 + +1.4 3,733,492 + +3.8 3,733,493 - -2.3 3,733,682 + Psyr_3115 0.12 -1.2 3,733,682 + Psyr_3115 0.12 -3.1 3,733,682 + Psyr_3115 0.12 -4.0 3,733,682 + Psyr_3115 0.12 +1.4 3,733,682 + Psyr_3115 0.12 +4.0 3,733,683 - Psyr_3115 0.12 +1.4 3,733,683 - Psyr_3115 0.12 +2.4 3,733,683 - Psyr_3115 0.12 -0.4 3,733,683 - Psyr_3115 0.12 +0.2 3,733,683 - Psyr_3115 0.12 -1.7 3,733,683 - Psyr_3115 0.12 -1.4 3,733,904 + Psyr_3115 0.32 +2.6
Or see this region's nucleotide sequence