Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3101

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,717,851	-		Psyr_3099	0.83	+2.1
3,717,932	-		Psyr_3099	0.86	-1.6
3,717,955	+		Psyr_3099	0.87	+3.3
3,717,955	+		Psyr_3099	0.87	-1.0
3,717,955	+		Psyr_3099	0.87	-0.2
3,717,956	-		Psyr_3099	0.87	+1.8
3,717,956	-		Psyr_3099	0.87	-0.4
3,717,956	-		Psyr_3099	0.87	-2.7
3,717,956	-		Psyr_3099	0.87	+3.2
3,717,956	-		Psyr_3099	0.87	+0.8
3,717,984	+		Psyr_3099	0.88	-1.4
3,717,984	+		Psyr_3099	0.88	+1.3
3,718,024	+		Psyr_3099	0.90	-1.4
3,718,106	-				+3.1
3,718,301	-				-3.0
3,718,557	+		Psyr_3100	0.71	+3.6
3,718,558	-		Psyr_3100	0.72	+2.8
3,718,651	+				+1.4
3,718,652	-				+1.4
3,718,738	-				+0.7
3,718,738	-				-2.0
3,718,862	+		Psyr_3101	0.13	+0.1
3,718,869	+		Psyr_3101	0.13	-3.5
3,718,869	+		Psyr_3101	0.13	+2.8
3,718,869	+		Psyr_3101	0.13	-1.5
3,718,869	+		Psyr_3101	0.13	-0.2
3,718,870	-		Psyr_3101	0.13	+2.6
3,718,870	-		Psyr_3101	0.13	+4.4
3,718,870	-		Psyr_3101	0.13	+1.8
3,718,980	+		Psyr_3101	0.24	-1.2
3,719,010	+		Psyr_3101	0.27	-2.2
3,719,010	+		Psyr_3101	0.27	-0.2
3,719,091	+		Psyr_3101	0.36	+2.4
3,719,092	-		Psyr_3101	0.36	-2.7
3,719,115	+		Psyr_3101	0.38	+1.4
3,719,119	-		Psyr_3101	0.38	+2.1
3,719,119	-		Psyr_3101	0.38	-0.1
3,719,119	-		Psyr_3101	0.38	+2.1
3,719,391	+		Psyr_3101	0.66	+2.8
3,719,569	+		Psyr_3101	0.83	-1.5
3,719,569	+		Psyr_3101	0.83	+0.8
3,719,569	+		Psyr_3101	0.83	-3.0
3,719,569	+		Psyr_3101	0.83	-0.2
3,719,570	-		Psyr_3101	0.83	+1.2
3,719,570	-		Psyr_3101	0.83	+2.1
3,719,570	-		Psyr_3101	0.83	+2.4
3,719,570	-		Psyr_3101	0.83	+1.5
3,719,571	+		Psyr_3101	0.84	+0.8
3,719,571	+		Psyr_3101	0.84	-0.2
3,719,571	+		Psyr_3101	0.84	-0.2
3,719,572	-		Psyr_3101	0.84	-0.1
3,719,751	-				+2.4
3,719,751	-				+0.0
3,719,754	+				+1.4
3,719,754	+				-0.2
3,719,754	+				+1.8
3,719,755	-				+0.7
3,719,755	-				-0.4
3,719,755	-				+1.1
3,719,802	+				-1.4
3,719,802	+				+1.4
3,719,803	-				+5.4
3,719,922	-				+3.1
3,719,938	+				+2.1
3,720,168	-		Psyr_3102	0.20	-2.6
3,720,168	-		Psyr_3102	0.20	+1.4
3,720,402	-		Psyr_3102	0.45	+2.8
3,720,402	-		Psyr_3102	0.45	+4.0
3,720,402	-		Psyr_3102	0.45	+1.8
3,720,402	-		Psyr_3102	0.45	-0.2
3,720,496	+		Psyr_3102	0.55	+3.2