Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3065

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,664,383	+		Psyr_3064	0.27	+2.5
3,664,383	+		Psyr_3064	0.27	-0.2
3,664,431	+		Psyr_3064	0.32	-2.3
3,664,431	+		Psyr_3064	0.32	+4.0
3,664,431	+		Psyr_3064	0.32	+3.6
3,664,431	+		Psyr_3064	0.32	-3.0
3,664,681	-		Psyr_3064	0.57	-0.1
3,664,681	-		Psyr_3064	0.57	-3.1
3,665,038	-				-0.7
3,665,054	+				-3.2
3,665,054	+				-0.5
3,665,054	+				+1.3
3,665,054	+				+1.3
3,665,054	+				-0.7
3,665,054	+				-2.0
3,665,054	+				+2.9
3,665,054	+				-2.3
3,665,054	+				-1.6
3,665,054	+				+0.7
3,665,055	-				-1.5
3,665,104	+				-1.0
3,665,104	+				-3.0
3,665,105	-				+1.7
3,665,139	+				-2.4
3,665,139	+				-0.3
3,665,139	+				-0.3
3,665,139	+				+2.0
3,665,139	+				-2.5
3,665,139	+				-1.6
3,665,139	+				+2.5
3,665,140	-				-2.9
3,665,140	-				-4.6
3,665,140	-				-2.4
3,665,140	-				-2.9
3,665,140	-				-0.3
3,665,140	-				-0.3
3,665,140	-				-4.4
3,665,161	+				+0.4
3,665,242	+				+3.3
3,665,242	+				-0.9
3,665,242	+				-2.4
3,665,242	+				-1.3
3,665,242	+				+0.7
3,665,243	-				-2.9
3,665,243	-				+0.1
3,665,268	-				-2.6
3,665,446	-		Psyr_3065	0.22	-0.3
3,665,446	-		Psyr_3065	0.22	-3.4
3,665,446	-		Psyr_3065	0.22	-0.7
3,665,446	-		Psyr_3065	0.22	-1.3
3,665,604	+		Psyr_3065	0.36	+0.4
3,665,637	-		Psyr_3065	0.39	-0.7
3,665,637	-		Psyr_3065	0.39	-1.5
3,665,637	-		Psyr_3065	0.39	-1.5
3,665,637	-		Psyr_3065	0.39	+2.0
3,665,736	+		Psyr_3065	0.47	-2.5
3,665,736	+		Psyr_3065	0.47	-0.3
3,665,780	+		Psyr_3065	0.51	-0.3
3,665,787	+		Psyr_3065	0.51	+0.6
3,665,910	+		Psyr_3065	0.62	+2.9
3,665,910	+		Psyr_3065	0.62	+2.9
3,665,910	+		Psyr_3065	0.62	+0.0
3,665,910	+		Psyr_3065	0.62	-1.2
3,665,910	+		Psyr_3065	0.62	-1.5
3,665,911	-		Psyr_3065	0.62	+1.7
3,665,911	-		Psyr_3065	0.62	+0.7
3,665,911	-		Psyr_3065	0.62	-1.1
3,665,911	-		Psyr_3065	0.62	-1.3
3,665,911	-		Psyr_3065	0.62	-3.1
3,665,947	+		Psyr_3065	0.65	-4.3
3,665,947	+		Psyr_3065	0.65	+0.6
3,665,947	+		Psyr_3065	0.65	+2.0
3,665,947	+		Psyr_3065	0.65	+2.5
3,665,947	+		Psyr_3065	0.65	-1.1
3,665,947	+		Psyr_3065	0.65	-0.9
3,665,948	-		Psyr_3065	0.65	-1.2
3,665,948	-		Psyr_3065	0.65	-3.1
3,665,948	-		Psyr_3065	0.65	-3.7
3,665,948	-		Psyr_3065	0.65	-1.9
3,665,948	-		Psyr_3065	0.65	-3.1
3,665,953	+		Psyr_3065	0.65	-1.6
3,665,953	+		Psyr_3065	0.65	+2.7
3,665,953	+		Psyr_3065	0.65	+2.9
3,665,954	-		Psyr_3065	0.66	-1.0
3,665,967	+		Psyr_3065	0.67	-1.6
3,665,967	+		Psyr_3065	0.67	-1.6
3,665,967	+		Psyr_3065	0.67	+4.2
3,665,967	+		Psyr_3065	0.67	-2.1
3,665,968	-		Psyr_3065	0.67	-1.4
3,665,968	-		Psyr_3065	0.67	-1.1
3,665,968	-		Psyr_3065	0.67	-2.7
3,665,968	-		Psyr_3065	0.67	-2.7
3,665,968	-		Psyr_3065	0.67	-0.3
3,666,016	-		Psyr_3065	0.71	-0.3
3,666,019	-		Psyr_3065	0.71	+0.7
3,666,195	+		Psyr_3065	0.86	-3.4
3,666,196	-		Psyr_3065	0.86	-3.3
3,666,241	-		Psyr_3065	0.90	+2.0
3,666,251	+				-0.3
3,666,252	-				+0.7
3,666,252	-				-0.8
3,666,253	+				-2.6
3,666,253	+				-0.1
3,666,253	+				-1.5
3,666,254	-				-1.7
3,666,254	-				-3.0
3,666,254	-				-1.0
3,666,352	+				-0.6
3,666,412	+				-1.1
3,666,412	+				+0.2
3,666,413	-				+3.0
3,666,556	+		Psyr_3066	0.17	+0.7
3,666,557	-		Psyr_3066	0.17	+1.3
3,666,622	+		Psyr_3066	0.25	+2.5
3,666,622	+		Psyr_3066	0.25	-1.3
3,666,622	+		Psyr_3066	0.25	-1.2
3,666,622	+		Psyr_3066	0.25	-0.3
3,666,622	+		Psyr_3066	0.25	-1.2
3,666,622	+		Psyr_3066	0.25	-0.3
3,666,623	-		Psyr_3066	0.25	-0.5
3,666,623	-		Psyr_3066	0.25	+2.0
3,666,623	-		Psyr_3066	0.25	+1.8
3,666,646	+		Psyr_3066	0.27	-3.5
3,666,647	-		Psyr_3066	0.28	+0.9
3,666,647	-		Psyr_3066	0.28	+3.2
3,666,938	+		Psyr_3066	0.61	-0.3
3,666,938	+		Psyr_3066	0.61	-0.3
3,667,122	-		Psyr_3066	0.83	+1.3
3,667,122	-		Psyr_3066	0.83	+1.3