Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3040

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,638,409	+				+2.0
3,638,410	-				+1.0
3,638,459	+				-0.3
3,638,460	-				+0.7
3,638,460	-				+0.8
3,638,510	+		Psyr_3038	0.20	-2.9
3,638,723	+				+3.9
3,638,746	+				-0.5
3,638,746	+				+2.5
3,638,747	-				+0.6
3,638,747	-				+3.2
3,638,859	+				+0.7
3,638,859	+				+0.3
3,638,860	-				+1.7
3,638,860	-				-3.5
3,638,874	+				-0.9
3,638,875	-				+4.3
3,638,875	-				+2.7
3,639,100	+		Psyr_3039	0.74	-0.1
3,639,100	+		Psyr_3039	0.74	+0.1
3,639,101	-		Psyr_3039	0.74	+3.2
3,639,101	-		Psyr_3039	0.74	-1.8
3,639,133	-		Psyr_3039	0.84	+2.5
3,639,155	+				-1.0
3,639,155	+				-0.7
3,639,259	+				-4.1
3,639,259	+				-3.9
3,639,260	-				+2.7
3,639,380	+		Psyr_3040	0.30	-2.4
3,639,394	+		Psyr_3040	0.34	-3.1
3,639,394	+		Psyr_3040	0.34	+2.5
3,639,434	+		Psyr_3040	0.46	-0.3
3,639,435	-		Psyr_3040	0.46	-1.9
3,639,620	+				-0.3
3,639,620	+				+2.5
3,639,620	+				-1.1
3,639,620	+				-0.7
3,639,620	+				+2.9
3,639,621	-				+0.7
3,639,621	-				+2.0
3,639,621	-				+3.8
3,639,621	-				+2.4
3,639,653	+				-3.3
3,639,654	-				-0.6
3,639,654	-				+0.7
3,639,654	-				-0.7
3,639,722	-				-1.5
3,639,780	+				-2.4
3,639,780	+				-1.1
3,639,781	-				-0.4
3,639,800	+				-1.7
3,639,802	+				+2.0
3,639,802	+				+0.7
3,639,803	-				+2.9
3,639,869	+				-1.5
3,639,870	+				+0.7
3,639,870	-				-1.5
3,639,872	+				+1.3
3,639,873	-				+1.7
3,639,873	-				-0.4
3,639,873	-				-1.9
3,639,928	+				-4.4
3,639,928	+				-3.1
3,639,929	-				-1.4
3,639,929	-				+1.3
3,639,929	-				+1.3
3,639,929	-				-1.1
3,639,942	+				-4.2
3,640,183	+		Psyr_3041	0.28	-3.8
3,640,204	+		Psyr_3041	0.30	-1.9
3,640,205	-		Psyr_3041	0.30	-0.9
3,640,205	-		Psyr_3041	0.30	-0.4
3,640,213	+		Psyr_3041	0.31	-2.1
3,640,213	+		Psyr_3041	0.31	-2.3
3,640,310	+		Psyr_3041	0.40	-2.9
3,640,311	-		Psyr_3041	0.40	-3.3
3,640,311	-		Psyr_3041	0.40	+0.7
3,640,311	-		Psyr_3041	0.40	-2.3
3,640,351	+		Psyr_3041	0.43	-3.1