Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3025

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,621,779	+		Psyr_3024	0.19	+2.7
3,621,893	+		Psyr_3024	0.29	+3.1
3,621,893	+		Psyr_3024	0.29	-2.3
3,621,893	+		Psyr_3024	0.29	+1.7
3,621,893	+		Psyr_3024	0.29	+3.0
3,621,893	+		Psyr_3024	0.29	+1.2
3,621,906	-		Psyr_3024	0.30	-1.9
3,621,906	-		Psyr_3024	0.30	+1.2
3,621,906	-		Psyr_3024	0.30	+1.7
3,622,000	+		Psyr_3024	0.38	+2.5
3,622,172	+		Psyr_3024	0.54	-0.3
3,622,173	-		Psyr_3024	0.54	+2.0
3,622,319	+		Psyr_3024	0.66	-2.1
3,622,371	+		Psyr_3024	0.71	+0.7
3,622,371	+		Psyr_3024	0.71	+0.7
3,622,371	+		Psyr_3024	0.71	-0.3
3,622,371	+		Psyr_3024	0.71	+0.6
3,622,371	+		Psyr_3024	0.71	+2.8
3,622,371	+		Psyr_3024	0.71	+3.4
3,622,372	-		Psyr_3024	0.71	-1.9
3,622,372	-		Psyr_3024	0.71	+3.1
3,622,372	-		Psyr_3024	0.71	+1.7
3,622,372	-		Psyr_3024	0.71	+2.0
3,622,372	-		Psyr_3024	0.71	-2.7
3,622,405	+		Psyr_3024	0.74	-1.8
3,622,406	-		Psyr_3024	0.74	-2.3
3,622,551	-		Psyr_3024	0.87	+3.7
3,622,551	-		Psyr_3024	0.87	+1.2
3,622,659	+				+0.7
3,622,659	+				-2.1
3,622,659	+				-0.8
3,622,660	-				+2.7
3,622,660	-				+3.2
3,622,660	-				+4.0
3,622,660	-				-2.6
3,622,660	-				-0.3
3,622,683	+				-1.2
3,622,737	+				+0.2
3,622,737	+				-1.2
3,622,737	+				-0.3
3,622,737	+				+1.7
3,622,737	+				+2.0
3,622,738	-				-0.7
3,622,738	-				+1.2
3,622,738	-				-2.7
3,622,738	-				-1.5
3,622,775	+				+0.7
3,622,776	-				-0.1
3,622,776	-				+4.2
3,622,776	-				+3.0
3,622,776	-				+3.7
3,622,827	+				-2.6
3,623,111	+		Psyr_3025	0.30	-1.4
3,623,111	+		Psyr_3025	0.30	+2.0
3,623,165	+		Psyr_3025	0.35	-3.2
3,623,166	-		Psyr_3025	0.35	-1.2
3,623,303	+		Psyr_3025	0.46	+0.7
3,623,303	+		Psyr_3025	0.46	+3.2
3,623,304	-		Psyr_3025	0.46	+3.5
3,623,401	-		Psyr_3025	0.54	+2.2
3,623,524	+		Psyr_3025	0.64	+1.2
3,623,524	+		Psyr_3025	0.64	-1.7
3,623,524	+		Psyr_3025	0.64	+0.5
3,623,524	+		Psyr_3025	0.64	-0.9
3,623,525	-		Psyr_3025	0.64	+2.8
3,623,525	-		Psyr_3025	0.64	+3.0
3,623,525	-		Psyr_3025	0.64	+2.0
3,623,525	-		Psyr_3025	0.64	+2.5
3,623,525	-		Psyr_3025	0.64	-1.8
3,623,772	+		Psyr_3025	0.84	-0.8
3,623,772	+		Psyr_3025	0.84	+1.2
3,623,772	+		Psyr_3025	0.84	-0.0
3,623,772	+		Psyr_3025	0.84	+1.2
3,623,772	+		Psyr_3025	0.84	-1.3
3,623,772	+		Psyr_3025	0.84	-2.7
3,623,772	+		Psyr_3025	0.84	-0.2
3,623,772	+		Psyr_3025	0.84	+2.0
3,623,772	+		Psyr_3025	0.84	-0.4
3,623,772	+		Psyr_3025	0.84	+3.1
3,623,773	-		Psyr_3025	0.84	+2.2
3,623,773	-		Psyr_3025	0.84	+3.0
3,623,774	+		Psyr_3025	0.84	+3.4
3,623,774	+		Psyr_3025	0.84	-0.4
3,623,774	+		Psyr_3025	0.84	-1.8
3,623,774	+		Psyr_3025	0.84	+1.2
3,623,774	+		Psyr_3025	0.84	+2.2
3,623,775	-		Psyr_3025	0.84	-0.3
3,623,775	-		Psyr_3025	0.84	+1.2
3,623,775	-		Psyr_3025	0.84	-2.4
3,623,775	-		Psyr_3025	0.84	+0.1
3,623,775	-		Psyr_3025	0.84	-0.3
3,623,775	-		Psyr_3025	0.84	-3.3
3,623,791	+		Psyr_3025	0.86	+3.2
3,623,873	+				-1.1
3,623,874	-				-0.1
3,624,224	+		Psyr_3026	0.28	+2.8
3,624,224	+		Psyr_3026	0.28	+2.0
3,624,224	+		Psyr_3026	0.28	-2.9
3,624,224	+		Psyr_3026	0.28	-0.8
3,624,225	-		Psyr_3026	0.28	-2.0
3,624,225	-		Psyr_3026	0.28	-0.3
3,624,349	-		Psyr_3026	0.51	+1.2
3,624,691	+				-4.5
3,624,691	+				-0.3
3,624,691	+				-0.3
3,624,691	+				-4.2
3,624,692	-				-1.5
3,624,692	-				+0.5
3,624,692	-				-0.8
3,624,692	-				-2.2
3,624,692	-				-0.8
3,624,692	-				-2.9
3,624,715	+				-3.7