Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3023

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,620,247	+		Psyr_3022	0.63	-0.6
3,620,248	-		Psyr_3022	0.64	+3.7
3,620,248	-		Psyr_3022	0.64	-0.7
3,620,308	-		Psyr_3022	0.76	-0.9
3,620,386	+				-0.9
3,620,424	+				-3.1
3,620,424	+				+1.2
3,620,425	-				-0.3
3,620,425	-				-0.0
3,620,425	-				+0.5
3,620,495	-				+3.4
3,620,575	-				+1.7
3,620,608	-				-0.1
3,620,661	-				+0.7
3,620,682	-				+0.7
3,620,787	+				-0.3
3,620,787	+				-0.8
3,620,787	+				-0.3
3,620,788	-				+2.8
3,620,788	-				+0.7
3,620,788	-				-0.2
3,620,794	+				+3.0
3,620,843	-				-0.4
3,620,906	-				+2.0
3,620,906	-				-0.6
3,621,032	+		Psyr_3023	0.22	-0.3
3,621,064	+		Psyr_3023	0.28	+2.0
3,621,065	-		Psyr_3023	0.28	-1.8
3,621,214	+		Psyr_3023	0.55	+1.0
3,621,214	+		Psyr_3023	0.55	+2.0
3,621,214	+		Psyr_3023	0.55	+2.0
3,621,215	-		Psyr_3023	0.55	+2.5
3,621,394	+		Psyr_3023	0.88	-2.8
3,621,490	+				-0.3
3,621,490	+				-0.3
3,621,519	+				-0.3
3,621,519	+				-2.6
3,621,520	-				+3.0
3,621,520	-				-1.3
3,621,520	-				+2.0
3,621,520	-				+3.2
3,621,520	-				+3.7
3,621,520	-				-1.6
3,621,520	-				-3.8
3,621,520	-				+3.7
3,621,520	-				-1.7
3,621,545	-				+0.7
3,621,545	-				-0.0
3,621,545	-				-0.2
3,621,545	-				-1.0
3,621,545	-				+2.0
3,621,545	-				-2.5
3,621,545	-				+2.0
3,621,559	+				-4.1
3,621,559	+				+2.0
3,621,559	+				-3.5
3,621,559	+				-0.3
3,621,559	+				+0.7
3,621,559	+				-1.9
3,621,559	+				+1.7
3,621,559	+				+1.2
3,621,560	-				+2.5
3,621,560	-				+0.7
3,621,560	-				+3.1
3,621,560	-				+0.4
3,621,560	-				+2.2
3,621,722	+		Psyr_3024	0.14	+2.7
3,621,722	+		Psyr_3024	0.14	+2.8
3,621,779	+		Psyr_3024	0.19	+2.7
3,621,893	+		Psyr_3024	0.29	+3.1
3,621,893	+		Psyr_3024	0.29	-2.3
3,621,893	+		Psyr_3024	0.29	+1.7
3,621,893	+		Psyr_3024	0.29	+3.0
3,621,893	+		Psyr_3024	0.29	+1.2
3,621,906	-		Psyr_3024	0.30	-1.9
3,621,906	-		Psyr_3024	0.30	+1.2
3,621,906	-		Psyr_3024	0.30	+1.7
3,622,000	+		Psyr_3024	0.38	+2.5
3,622,172	+		Psyr_3024	0.54	-0.3
3,622,173	-		Psyr_3024	0.54	+2.0
3,622,319	+		Psyr_3024	0.66	-2.1
3,622,371	+		Psyr_3024	0.71	+0.7
3,622,371	+		Psyr_3024	0.71	+0.7
3,622,371	+		Psyr_3024	0.71	-0.3
3,622,371	+		Psyr_3024	0.71	+0.6
3,622,371	+		Psyr_3024	0.71	+2.8
3,622,371	+		Psyr_3024	0.71	+3.4
3,622,372	-		Psyr_3024	0.71	-1.9
3,622,372	-		Psyr_3024	0.71	+3.1
3,622,372	-		Psyr_3024	0.71	+1.7
3,622,372	-		Psyr_3024	0.71	+2.0
3,622,372	-		Psyr_3024	0.71	-2.7
3,622,405	+		Psyr_3024	0.74	-1.8
3,622,406	-		Psyr_3024	0.74	-2.3